Click here to switch to the map view.

The map label for this gene is yybO [H]

Identifier: 148360695

GI number: 148360695

Start: 804964

End: 806256

Strand: Direct

Name: yybO [H]

Synonym: LPC_2642

Alternate gene names: 148360695

Gene position: 804964-806256 (Clockwise)

Preceding gene: 148360696

Following gene: 148360694

Centisome position: 22.51

GC content: 40.14

Gene sequence:

>1293_bases
TTGCATACTGAAAACCGAACTAACTATGCATTGATAGGATGGCTACTTTGTGGGCTGGGAGCAATATTTTATAGTTATGA
GTATTTGTTACGCATCGCACCAAGCGTAATGGAAGACGCTTTACGATCTCACTTTAATTTATCAGCATCTGGTTTTGGTT
TTCTGTCATCTTTTTATTATTTTGCTTATGTTCCTATGCAATTGCCAGTTGGAGTTTTACTGGACAGGTATGGGCCAAAA
AGGCTATTAACTCTGGCGTGTTTAGTATGCGTTATTGGAACGTATATGTTTACGGGGACAACTATTTTTTGGGTAGCCGC
AACAGGTCGTTTTTTAGTTGGATTTGGTTCTGCTTTCGCTTTCGTCGGTGTGTTAAAGATCGCAACTCTTTGGCTGCCTG
AAAATCGATTGGCTATGATCTCTGGTATGACGTCGGCACTAGGCCCCATCGGTGCTATGCTGGGCGATAACTTTCTGGAG
TTATTCATCGTTAAGATGGGTTGGGTTAAGACACTTAACATGACTGCAGCTTTTGGTATTGTATTGACTTTAGTTTTGTG
GGTTGGGATCAGGGATAGGAAGGGACAGCACAGGCAAAGCGGTACAGTTCCCACTCTTAAGAAAGGGTTAGTTGATCTGG
GAATTATTATTACCAGCCGACAGATATGGGTTAATGGAATGTATGGCTGTTTAGTTTATCTGCCAACTACGGTTTTTGCA
GAGTTGTGGGGTATTCCCTATTTACACCATGCCCATGGTTTAACTACTCAAGCGGCAGGATTAGCTAACTCTGTACTATT
TTTGGGATTTATTATTGGTGCTCCAATAATGGGATATATTTCGGATCGTTTGTATCGACGTAAATTCCCAATGCTAATTG
GTGCTAGCGGCGCTGCAATTGTCATGATGATGATTTTATATTTGCCTGGATTAAATGAATCCAATATTCAAGCTTTAATG
TTTTTATTAGGATTGCTTTATAGCGCTCAAGCTATAGTTTTTGCTGTGGGCAGAGAGTTGAGTCCTGGTGAGGCAGCAGG
AACGGCAATGGCGGTAACTAATATGATAGTCATGCTCGGCGCAATGTTTTTGCAGCCGTTGGTAGGGCATTTATTAGACT
TCAGCTTATCAACTCATTTAAGTGATACTACTGGTATTGTTGTAGATAACATGAGTAAACTATATACCGTAGATGATTAT
CAGTTTGCCTTATCCATTATTCCATTAGGTATATTGATAGCGGCCATTTTAACTTTCTTTCTAAAAGAAACTCATGCAAA
AGCACCTAAATAA

Upstream 100 bases:

>100_bases
CAAGATGGGCTTTTTTGCGCTTACAAGATACGCTGGGATGCATAAATGGGAACTAAGATGGGATTTAAGAATACTTGACT
AAATTGTTAAGGAGGTAATT

Downstream 100 bases:

>100_bases
TATGACTACTAAAAAACAAATTTCATATGGCGTCCTAGTTTGCTTTATCGGGGCTGTTTTTTACTGTTATGAATTTATTC
TCAGAATTGTTCCGGGAGCT

Product: major facilitator family transporter transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MHTENRTNYALIGWLLCGLGAIFYSYEYLLRIAPSVMEDALRSHFNLSASGFGFLSSFYYFAYVPMQLPVGVLLDRYGPK
RLLTLACLVCVIGTYMFTGTTIFWVAATGRFLVGFGSAFAFVGVLKIATLWLPENRLAMISGMTSALGPIGAMLGDNFLE
LFIVKMGWVKTLNMTAAFGIVLTLVLWVGIRDRKGQHRQSGTVPTLKKGLVDLGIIITSRQIWVNGMYGCLVYLPTTVFA
ELWGIPYLHHAHGLTTQAAGLANSVLFLGFIIGAPIMGYISDRLYRRKFPMLIGASGAAIVMMMILYLPGLNESNIQALM
FLLGLLYSAQAIVFAVGRELSPGEAAGTAMAVTNMIVMLGAMFLQPLVGHLLDFSLSTHLSDTTGIVVDNMSKLYTVDDY
QFALSIIPLGILIAAILTFFLKETHAKAPK

Sequences:

>Translated_430_residues
MHTENRTNYALIGWLLCGLGAIFYSYEYLLRIAPSVMEDALRSHFNLSASGFGFLSSFYYFAYVPMQLPVGVLLDRYGPK
RLLTLACLVCVIGTYMFTGTTIFWVAATGRFLVGFGSAFAFVGVLKIATLWLPENRLAMISGMTSALGPIGAMLGDNFLE
LFIVKMGWVKTLNMTAAFGIVLTLVLWVGIRDRKGQHRQSGTVPTLKKGLVDLGIIITSRQIWVNGMYGCLVYLPTTVFA
ELWGIPYLHHAHGLTTQAAGLANSVLFLGFIIGAPIMGYISDRLYRRKFPMLIGASGAAIVMMMILYLPGLNESNIQALM
FLLGLLYSAQAIVFAVGRELSPGEAAGTAMAVTNMIVMLGAMFLQPLVGHLLDFSLSTHLSDTTGIVVDNMSKLYTVDDY
QFALSIIPLGILIAAILTFFLKETHAKAPK
>Mature_430_residues
MHTENRTNYALIGWLLCGLGAIFYSYEYLLRIAPSVMEDALRSHFNLSASGFGFLSSFYYFAYVPMQLPVGVLLDRYGPK
RLLTLACLVCVIGTYMFTGTTIFWVAATGRFLVGFGSAFAFVGVLKIATLWLPENRLAMISGMTSALGPIGAMLGDNFLE
LFIVKMGWVKTLNMTAAFGIVLTLVLWVGIRDRKGQHRQSGTVPTLKKGLVDLGIIITSRQIWVNGMYGCLVYLPTTVFA
ELWGIPYLHHAHGLTTQAAGLANSVLFLGFIIGAPIMGYISDRLYRRKFPMLIGASGAAIVMMMILYLPGLNESNIQALM
FLLGLLYSAQAIVFAVGRELSPGEAAGTAMAVTNMIVMLGAMFLQPLVGHLLDFSLSTHLSDTTGIVVDNMSKLYTVDDY
QFALSIIPLGILIAAILTFFLKETHAKAPK

Specific function: Uptake Of D-Glucarate. [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI1789152, Length=389, Percent_Identity=25.706940874036, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46970; Mature: 46970

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCC
>Mature Secondary Structure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HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]