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The map label for this gene is 148360642

Identifier: 148360642

GI number: 148360642

Start: 880053

End: 880478

Strand: Direct

Name: 148360642

Synonym: LPC_2588

Alternate gene names: NA

Gene position: 880053-880478 (Clockwise)

Preceding gene: 148360643

Following gene: 148360637

Centisome position: 24.61

GC content: 34.27

Gene sequence:

>426_bases
ATGTATAACATCATGTCATTTCTATGTGGTTTGTTATTTGGAGCCGGGTTGACTATTTCAAATATGATCAATCCTAACAA
GGTATTAAATTTTCTTGATATCAATGGATTTTGGGATCCGAGTTTACTGATTGTAATGGCTGTTGCTGTCACCGTAACTT
TTTTGGGGTACAAACTGATAAACAAATTTGATAAACCAATATTGTGTAATCAATTTTATTTACCCGAGAAGAAAAACATT
GAGAAAAAATTAATCTTGGGAAGTATCATTTTTGGAATTGGTTGGGGTGTGGCTGGATACTGCCCAGGCCCATCTATTAC
TGCCTTGACTACCTTTAATTCCGATCCAGTATATTTTGTGATTGGGCTGATAGCAGGATCATGGACTTATTATTGGCTAT
TTAAAAAGAGGACTATTCAAAAATAA

Upstream 100 bases:

>100_bases
TGGCCAGATTTTCCAAGCGCTCCTTTATAGCGACACTGCTTTTTATCTTATCTGCAATGATTACTGTGTATCTGATAAGA
CATGTGGGAGGATTATATTA

Downstream 100 bases:

>100_bases
AACTCTTGGAGGAAGTGCCAGGTGGTTACACCTGGAAGATCACCCCTCGATTTTGACTTTAAGATCCAAAACATTGGCAT
TAATTGTCACCCGGCCTGTA

Product: transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MYNIMSFLCGLLFGAGLTISNMINPNKVLNFLDINGFWDPSLLIVMAVAVTVTFLGYKLINKFDKPILCNQFYLPEKKNI
EKKLILGSIIFGIGWGVAGYCPGPSITALTTFNSDPVYFVIGLIAGSWTYYWLFKKRTIQK

Sequences:

>Translated_141_residues
MYNIMSFLCGLLFGAGLTISNMINPNKVLNFLDINGFWDPSLLIVMAVAVTVTFLGYKLINKFDKPILCNQFYLPEKKNI
EKKLILGSIIFGIGWGVAGYCPGPSITALTTFNSDPVYFVIGLIAGSWTYYWLFKKRTIQK
>Mature_141_residues
MYNIMSFLCGLLFGAGLTISNMINPNKVLNFLDINGFWDPSLLIVMAVAVTVTFLGYKLINKFDKPILCNQFYLPEKKNI
EKKLILGSIIFGIGWGVAGYCPGPSITALTTFNSDPVYFVIGLIAGSWTYYWLFKKRTIQK

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 15834; Mature: 15834

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNIMSFLCGLLFGAGLTISNMINPNKVLNFLDINGFWDPSLLIVMAVAVTVTFLGYKLI
CCHHHHHHHHHHHHCCCCHHHCCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
NKFDKPILCNQFYLPEKKNIEKKLILGSIIFGIGWGVAGYCPGPSITALTTFNSDPVYFV
HHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEE
IGLIAGSWTYYWLFKKRTIQK
EEEHHCCCEEEEEEECCCCCC
>Mature Secondary Structure
MYNIMSFLCGLLFGAGLTISNMINPNKVLNFLDINGFWDPSLLIVMAVAVTVTFLGYKLI
CCHHHHHHHHHHHHCCCCHHHCCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
NKFDKPILCNQFYLPEKKNIEKKLILGSIIFGIGWGVAGYCPGPSITALTTFNSDPVYFV
HHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEE
IGLIAGSWTYYWLFKKRTIQK
EEEHHCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]