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The map label for this gene is nrdR [H]

Identifier: 148360620

GI number: 148360620

Start: 904134

End: 904562

Strand: Direct

Name: nrdR [H]

Synonym: LPC_2566

Alternate gene names: 148360620

Gene position: 904134-904562 (Clockwise)

Preceding gene: 148360621

Following gene: 148360619

Centisome position: 25.28

GC content: 40.33

Gene sequence:

>429_bases
GTGGATTCACGTCTGGTCGCGGATGGTGCTCAAGTTCGCAGAAGGCGTGAATGTCTGGAATGTCATGAGCGGTTTACTAC
TTTTGAAACCGCTGAATTGATTATGCCATTGATTATAAAACGTGATGGAAGAAGAGAACCGTTTCATATTGATAATTTAC
GTTCTGGCATGTTGAGAGCCTTGGAGAAAAGACCTGTCAGCGTTGATGATTTGGAAAAAGCTATTATTTCTATCACTGAG
GAAATTCGAAGAAGAGGTGAACGCGAGATCGATTCCCAGGTGGTTGGCGAGTTGGTAATGAAGGAATTATTCAGGCTTGA
TCATGTGGCCTATGTGCGTTTTGCATCAGTGTATAAACGCTTTAAAGATGTGAGTGATTTTAGACAAACAATTGATCAAA
TGAAAAATGAAGATAAGGAAAAGTCTTAG

Upstream 100 bases:

>100_bases
TTTCAAGAGTGAAAACCCAGGTGTTGCTACTCTGTCGTGAATTTCCGGTTTATGCCTAATCATGTATTGTCCATTTTGTC
ATGCGGAAGAAACAAAGGTA

Downstream 100 bases:

>100_bases
ATAAAAAATGTGAAGGGCTCACTTTTCTTGTTGTTATTAGAATAATATGAGGTAATTGTGGAAAAACAATCAATTCGTGG
TAAAAGACGAGCTCGAAAAT

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDSRLVADGAQVRRRRECLECHERFTTFETAELIMPLIIKRDGRREPFHIDNLRSGMLRALEKRPVSVDDLEKAIISITE
EIRRRGEREIDSQVVGELVMKELFRLDHVAYVRFASVYKRFKDVSDFRQTIDQMKNEDKEKS

Sequences:

>Translated_142_residues
MDSRLVADGAQVRRRRECLECHERFTTFETAELIMPLIIKRDGRREPFHIDNLRSGMLRALEKRPVSVDDLEKAIISITE
EIRRRGEREIDSQVVGELVMKELFRLDHVAYVRFASVYKRFKDVSDFRQTIDQMKNEDKEKS
>Mature_142_residues
MDSRLVADGAQVRRRRECLECHERFTTFETAELIMPLIIKRDGRREPFHIDNLRSGMLRALEKRPVSVDDLEKAIISITE
EIRRRGEREIDSQVVGELVMKELFRLDHVAYVRFASVYKRFKDVSDFRQTIDQMKNEDKEKS

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=136, Percent_Identity=57.3529411764706, Blast_Score=166, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 16857; Mature: 16857

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSRLVADGAQVRRRRECLECHERFTTFETAELIMPLIIKRDGRREPFHIDNLRSGMLRA
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LEKRPVSVDDLEKAIISITEEIRRRGEREIDSQVVGELVMKELFRLDHVAYVRFASVYKR
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKDVSDFRQTIDQMKNEDKEKS
HHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDSRLVADGAQVRRRRECLECHERFTTFETAELIMPLIIKRDGRREPFHIDNLRSGMLRA
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LEKRPVSVDDLEKAIISITEEIRRRGEREIDSQVVGELVMKELFRLDHVAYVRFASVYKR
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKDVSDFRQTIDQMKNEDKEKS
HHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA