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The map label for this gene is ndoR [H]

Identifier: 148360002

GI number: 148360002

Start: 3040592

End: 3041548

Strand: Direct

Name: ndoR [H]

Synonym: LPC_1932

Alternate gene names: 148360002

Gene position: 3040592-3041548 (Clockwise)

Preceding gene: 148360003

Following gene: 148360001

Centisome position: 85.02

GC content: 43.47

Gene sequence:

>957_bases
ATGAATACCGTACGATTTAACAATCAATCTTTTGCATTAACTCCGGATGAAAGCATCTTGCAATGTTTTTTGCGCCACGG
GGTAGAATACCCTAACTCCTGCCAGGCAGGCATTTGCCAGTCATGCCTGATTAAAGCCAAAGACGGAGAGATTAATCCAG
ACTGGCAAGAAGGATTACCCGAAACACTCAAATCTCAAGGATATTTCCTGGCTTGTCTTGCCAAACCAAGTACTTCGCTT
TATGTCGCATCTCCTGACAATGCCGAATGCGAGACACAGGCTCAAATAGTGAGCCTGCAACGCTTAAATCACAATGTTAT
TCAAGTCAAACTGAAGGTGGAACATCCTGCCCCATGGCTACCCGGACAATACCTGTCGCTCATTAATCCGGAAGGAACAA
TGCGCAATTATTCCATAGCCAATATCCCTGCTGATGATGGATACATTGAACTGCACATCAAAATTTACCCGCAAGGCAAG
ATGGGACAATGGCTTTTGCAACGCGCAGCCATTAATACATTCATCACCATCCGAGGCCCTTTTGGTCAATGTTATTATCA
TAATCCACATAATCTGGCTTTTGATATATTGCTGGCAGGGACAGGGACTGGCCTCGCTCCGCTGATAGGTATCATCAGAT
GCGCATTAACACAAAAGCATGAAGGAACAATTACCCTGGTGCATGGCGGAGTTACTGATGAGGATATCTATTACAAGGAA
GAACTGGAAATGCTGTCTTTATTGTTCAGCAACTTCCGCTATGATCCCTGTGTGCTGCAAAGTCAAGGGCTTTATCCAGA
AGGCTCAATTGAAAAACGGGTGCTAACTCACCTGCACTCTCCCAACACTACAAAAGTGTATGTCTGTGGTCCAAAGGAAA
CAACCAATAAATTGAAAACACGAATTTTTCTTGCGGGCGTTCCTTCAACAAATATTTATAGTGATGTTTTTTTATAA

Upstream 100 bases:

>100_bases
TAGGGGAAACCCTTAAGGAATTGGGCGCCAATGAAGAAGACATTCAGAAAGTAGCTGCAATCGCCAATAGTGTTCGTGGC
GATGTATTGGGGCGCTCATC

Downstream 100 bases:

>100_bases
TATTTAAATAGCCCTGGTGATTTATAATCTGGTGCAAACCAGATTATGTTTCTCGCTCATCAAAATGATCTCTTCTTTCC
GCTGATAGCATTTCTTTTCT

Product: ferredoxin reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MNTVRFNNQSFALTPDESILQCFLRHGVEYPNSCQAGICQSCLIKAKDGEINPDWQEGLPETLKSQGYFLACLAKPSTSL
YVASPDNAECETQAQIVSLQRLNHNVIQVKLKVEHPAPWLPGQYLSLINPEGTMRNYSIANIPADDGYIELHIKIYPQGK
MGQWLLQRAAINTFITIRGPFGQCYYHNPHNLAFDILLAGTGTGLAPLIGIIRCALTQKHEGTITLVHGGVTDEDIYYKE
ELEMLSLLFSNFRYDPCVLQSQGLYPEGSIEKRVLTHLHSPNTTKVYVCGPKETTNKLKTRIFLAGVPSTNIYSDVFL

Sequences:

>Translated_318_residues
MNTVRFNNQSFALTPDESILQCFLRHGVEYPNSCQAGICQSCLIKAKDGEINPDWQEGLPETLKSQGYFLACLAKPSTSL
YVASPDNAECETQAQIVSLQRLNHNVIQVKLKVEHPAPWLPGQYLSLINPEGTMRNYSIANIPADDGYIELHIKIYPQGK
MGQWLLQRAAINTFITIRGPFGQCYYHNPHNLAFDILLAGTGTGLAPLIGIIRCALTQKHEGTITLVHGGVTDEDIYYKE
ELEMLSLLFSNFRYDPCVLQSQGLYPEGSIEKRVLTHLHSPNTTKVYVCGPKETTNKLKTRIFLAGVPSTNIYSDVFL
>Mature_318_residues
MNTVRFNNQSFALTPDESILQCFLRHGVEYPNSCQAGICQSCLIKAKDGEINPDWQEGLPETLKSQGYFLACLAKPSTSL
YVASPDNAECETQAQIVSLQRLNHNVIQVKLKVEHPAPWLPGQYLSLINPEGTMRNYSIANIPADDGYIELHIKIYPQGK
MGQWLLQRAAINTFITIRGPFGQCYYHNPHNLAFDILLAGTGTGLAPLIGIIRCALTQKHEGTITLVHGGVTDEDIYYKE
ELEMLSLLFSNFRYDPCVLQSQGLYPEGSIEKRVLTHLHSPNTTKVYVCGPKETTNKLKTRIFLAGVPSTNIYSDVFL

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. Transfers electrons from ferredoxin (ndoA) to NADH [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI2367314, Length=227, Percent_Identity=24.6696035242291, Blast_Score=66, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322146, Length=206, Percent_Identity=29.6116504854369, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 35507; Mature: 35507

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVRFNNQSFALTPDESILQCFLRHGVEYPNSCQAGICQSCLIKAKDGEINPDWQEGLP
CCCEEECCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCCCCCCHHHCCC
ETLKSQGYFLACLAKPSTSLYVASPDNAECETQAQIVSLQRLNHNVIQVKLKVEHPAPWL
HHHHCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCC
PGQYLSLINPEGTMRNYSIANIPADDGYIELHIKIYPQGKMGQWLLQRAAINTFITIRGP
CCHHHEEECCCCCCCCCEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHHHEEEEEEECC
FGQCYYHNPHNLAFDILLAGTGTGLAPLIGIIRCALTQKHEGTITLVHGGVTDEDIYYKE
CCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHH
ELEMLSLLFSNFRYDPCVLQSQGLYPEGSIEKRVLTHLHSPNTTKVYVCGPKETTNKLKT
HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHEE
RIFLAGVPSTNIYSDVFL
EEEEEECCCCCCHHHHCC
>Mature Secondary Structure
MNTVRFNNQSFALTPDESILQCFLRHGVEYPNSCQAGICQSCLIKAKDGEINPDWQEGLP
CCCEEECCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCCCCCCHHHCCC
ETLKSQGYFLACLAKPSTSLYVASPDNAECETQAQIVSLQRLNHNVIQVKLKVEHPAPWL
HHHHCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCC
PGQYLSLINPEGTMRNYSIANIPADDGYIELHIKIYPQGKMGQWLLQRAAINTFITIRGP
CCHHHEEECCCCCCCCCEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHHHEEEEEEECC
FGQCYYHNPHNLAFDILLAGTGTGLAPLIGIIRCALTQKHEGTITLVHGGVTDEDIYYKE
CCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHH
ELEMLSLLFSNFRYDPCVLQSQGLYPEGSIEKRVLTHLHSPNTTKVYVCGPKETTNKLKT
HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHEE
RIFLAGVPSTNIYSDVFL
EEEEEECCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8486285; 8787402; 2294092 [H]