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The map label for this gene is 148360001

Identifier: 148360001

GI number: 148360001

Start: 3041773

End: 3042792

Strand: Direct

Name: 148360001

Synonym: LPC_1931

Alternate gene names: NA

Gene position: 3041773-3042792 (Clockwise)

Preceding gene: 148360002

Following gene: 148359994

Centisome position: 85.05

GC content: 40.78

Gene sequence:

>1020_bases
ATGATCGTCGATTTTGAAACGCACTTCATCACTGAAGCTTGTATTGATTATCTGACTCAACGCCAGGAAGTTCCCAAATT
GGTTCCAGAGCTCAATGGAGCTTATACAATGTGTTTTACGCCTGATGTTTCCTTATTTCACACAAGTGCATTAATGGAAG
AATTATTAAGTTTAAACGAGCAACGACTGGCAATTATGGACCAAGCAGGGGTGACAATCCAGGTATTAAGTTTGACTACT
ATCAATGGGATTGACTCCTGCCCTGGAGATGAAAACAAAAGCACCGCTTTAGCAAGAGAAGTCAATGACCAGCTTTACTC
TGCCATTCAAAAACATCCTGAACGATTTAAAGGTTTTGCTTCTATATCGCCTTATGACGTCAAAGAGGGTGTAAAAGAAT
TGGAAAGAGCGATATCTCAATTAGGCTTTGTAGGTTGGCTTACACACTCCAATTTTGGCCAGGATAATTACCTGGATGAT
AAAATCTATTGGCCATTGCTGGAAGCCGCGGAAAGTTTAAACATTCCTATCTACCTGCATCCGAATGTACCCATCATGCG
CGAATTCGGTAAATATGGTTTTGCCTTGGGAGGAAGTGCTTTAGGGTTTGAATTTGACACGGCTTTATGTCTGATGCGAA
TGATTCTTGGAGGTGTATTCGATGCGTTTCCCAAATTAAAAATTATGCTGGGGCACTTGGGCGAAACCATGCCTTTTTTA
ATGGAGCGTCTCGATCATTTATACCGTATACCAGACTTGAAACCTTATCGACCTTCTATTCAGCGTATTCCCTCAGAGGT
ATTACGTCAAAATGTTTACATAACCACCAGTGGGCGTTTCTTCGTTCCCGCCTTACGTTATGTTCTTGAGGTCATGGGAG
AGGACAGGGTATTGTTTGCCTCCGATTACCCAATGGAATCCTTACTTGACGCTACTCGATTTATTCAAGATTCCGATTTA
TCAAACCAAACGAAGCAAAAAATTTTCTCTATAAATGCCAAGAATTTGAACTTAATATGA

Upstream 100 bases:

>100_bases
CATCAGAACTTTTATAGCCATGTGGCGATATCTAATCTTCCGGCTATACTTAAGCATATAATTTTCAATCGTTTTTCTCA
CGTCTAAAAGGATTACGTTC

Downstream 100 bases:

>100_bases
ATCATCTCTCTTGCATCACATCAGTAAGGAGCTGATTTTCTTGCAGACATTAATTGAGCCAGGCTCAATTAATGTCATGC
TTTCTATAAATAAAATACGA

Product: 5-carboxyvanillate decarboxylase

Products: NA

Alternate protein names: Amidohydrolase; Amidohydrolase Family Protein; Amidohydrolase/Decarboxylase; Metal-Dependent Hydrolase; 4-Oxalomesaconate Hydratase; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; Hydrolase; O-Pyrocatechuate Decarboxylase; 2-Amino-3-Carboxymuconate 6-Semialdehyde Decarboxylase; Tryptophan 2 3-Dioxygenase; 2 3-Dihydroxybenzoic Acid Decarboxylase; Amidohydrolase Family; 5-Carboxyvanillate Decarboxylase; 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Metal Dependent Hydrolase; 5-Carboxy-2-Hydroxymuconate-6-Semialdehyde Decarboxylase; Amidohydrolase 2 Family Protein; Decarboxylase

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MIVDFETHFITEACIDYLTQRQEVPKLVPELNGAYTMCFTPDVSLFHTSALMEELLSLNEQRLAIMDQAGVTIQVLSLTT
INGIDSCPGDENKSTALAREVNDQLYSAIQKHPERFKGFASISPYDVKEGVKELERAISQLGFVGWLTHSNFGQDNYLDD
KIYWPLLEAAESLNIPIYLHPNVPIMREFGKYGFALGGSALGFEFDTALCLMRMILGGVFDAFPKLKIMLGHLGETMPFL
MERLDHLYRIPDLKPYRPSIQRIPSEVLRQNVYITTSGRFFVPALRYVLEVMGEDRVLFASDYPMESLLDATRFIQDSDL
SNQTKQKIFSINAKNLNLI

Sequences:

>Translated_339_residues
MIVDFETHFITEACIDYLTQRQEVPKLVPELNGAYTMCFTPDVSLFHTSALMEELLSLNEQRLAIMDQAGVTIQVLSLTT
INGIDSCPGDENKSTALAREVNDQLYSAIQKHPERFKGFASISPYDVKEGVKELERAISQLGFVGWLTHSNFGQDNYLDD
KIYWPLLEAAESLNIPIYLHPNVPIMREFGKYGFALGGSALGFEFDTALCLMRMILGGVFDAFPKLKIMLGHLGETMPFL
MERLDHLYRIPDLKPYRPSIQRIPSEVLRQNVYITTSGRFFVPALRYVLEVMGEDRVLFASDYPMESLLDATRFIQDSDL
SNQTKQKIFSINAKNLNLI
>Mature_339_residues
MIVDFETHFITEACIDYLTQRQEVPKLVPELNGAYTMCFTPDVSLFHTSALMEELLSLNEQRLAIMDQAGVTIQVLSLTT
INGIDSCPGDENKSTALAREVNDQLYSAIQKHPERFKGFASISPYDVKEGVKELERAISQLGFVGWLTHSNFGQDNYLDD
KIYWPLLEAAESLNIPIYLHPNVPIMREFGKYGFALGGSALGFEFDTALCLMRMILGGVFDAFPKLKIMLGHLGETMPFL
MERLDHLYRIPDLKPYRPSIQRIPSEVLRQNVYITTSGRFFVPALRYVLEVMGEDRVLFASDYPMESLLDATRFIQDSDL
SNQTKQKIFSINAKNLNLI

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI109715856, Length=279, Percent_Identity=29.0322580645161, Blast_Score=108, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI71995651, Length=277, Percent_Identity=25.9927797833935, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38470; Mature: 38470

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDFETHFITEACIDYLTQRQEVPKLVPELNGAYTMCFTPDVSLFHTSALMEELLSLNE
CEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCH
QRLAIMDQAGVTIQVLSLTTINGIDSCPGDENKSTALAREVNDQLYSAIQKHPERFKGFA
HHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCC
SISPYDVKEGVKELERAISQLGFVGWLTHSNFGQDNYLDDKIYWPLLEAAESLNIPIYLH
CCCCHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEC
PNVPIMREFGKYGFALGGSALGFEFDTALCLMRMILGGVFDAFPKLKIMLGHLGETMPFL
CCCHHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MERLDHLYRIPDLKPYRPSIQRIPSEVLRQNVYITTSGRFFVPALRYVLEVMGEDRVLFA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEE
SDYPMESLLDATRFIQDSDLSNQTKQKIFSINAKNLNLI
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIVDFETHFITEACIDYLTQRQEVPKLVPELNGAYTMCFTPDVSLFHTSALMEELLSLNE
CEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCH
QRLAIMDQAGVTIQVLSLTTINGIDSCPGDENKSTALAREVNDQLYSAIQKHPERFKGFA
HHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCC
SISPYDVKEGVKELERAISQLGFVGWLTHSNFGQDNYLDDKIYWPLLEAAESLNIPIYLH
CCCCHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEC
PNVPIMREFGKYGFALGGSALGFEFDTALCLMRMILGGVFDAFPKLKIMLGHLGETMPFL
CCCHHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MERLDHLYRIPDLKPYRPSIQRIPSEVLRQNVYITTSGRFFVPALRYVLEVMGEDRVLFA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEE
SDYPMESLLDATRFIQDSDLSNQTKQKIFSINAKNLNLI
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA