Click here to switch to the map view.

The map label for this gene is lporfX [H]

Identifier: 148359900

GI number: 148359900

Start: 2777330

End: 2777773

Strand: Direct

Name: lporfX [H]

Synonym: LPC_1828

Alternate gene names: 148359900

Gene position: 2777330-2777773 (Clockwise)

Preceding gene: 148359899

Following gene: 148359901

Centisome position: 77.66

GC content: 41.22

Gene sequence:

>444_bases
ATGACCATAAAAGAACAAATCAACAATGACATTAAAGATGCTATGCGCGCAAAGGACAAAAACTTGCTCAATGCTTTACG
CTTAATCAGTGCTGCGGTAAAACAAATTGAAGTCGATGAGCGCATTGAAGTGGATGATGAGCGCATGTTAGTCATCCTGG
ATAAAATGTCCAAACAACGCAAAGAATCTATTGCTCAATTTGAAAAAGCAAGCCGTGACGATCTCGTTGCCCAGGAACAG
TTTGAGTTGAATGTCATTTCAAAATACCTGCCTGAACCTTTAACTGACAATGAAATTGAAGAGTTAATCAAAGACGCGAT
CAAGTCTACTGGCGCTGAAAAAATGTCTGATATGGGTAAAGTCATGGCTATCCTTAAGCCAAAATTACAAGGACGCGCGG
ACATGGCCCAAGTCAGCGCCCGGATAAAGGCAAAATTAAGCTGA

Upstream 100 bases:

>100_bases
GAAATTGGCCTTCGTGGCAGTTTCGGTAGTAAATCGCAGCTCGTCCTATATTACACCAAGGTCACATTGTATGTGACCTT
TTGTTTTTTAAGGAATTAAA

Downstream 100 bases:

>100_bases
GTTCCAATATGTCTGGCTTAATCCCACAGCCATTCATTGATGATCTATTAAACCGCACTGATTTGGTGGAATTAATAGAC
GGATATGTTCCTTTGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTIKEQINNDIKDAMRAKDKNLLNALRLISAAVKQIEVDERIEVDDERMLVILDKMSKQRKESIAQFEKASRDDLVAQEQ
FELNVISKYLPEPLTDNEIEELIKDAIKSTGAEKMSDMGKVMAILKPKLQGRADMAQVSARIKAKLS

Sequences:

>Translated_147_residues
MTIKEQINNDIKDAMRAKDKNLLNALRLISAAVKQIEVDERIEVDDERMLVILDKMSKQRKESIAQFEKASRDDLVAQEQ
FELNVISKYLPEPLTDNEIEELIKDAIKSTGAEKMSDMGKVMAILKPKLQGRADMAQVSARIKAKLS
>Mature_146_residues
TIKEQINNDIKDAMRAKDKNLLNALRLISAAVKQIEVDERIEVDDERMLVILDKMSKQRKESIAQFEKASRDDLVAQEQF
ELNVISKYLPEPLTDNEIEELIKDAIKSTGAEKMSDMGKVMAILKPKLQGRADMAQVSARIKAKLS

Specific function: Unknown

COG id: COG1610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003789
- InterPro:   IPR023168
- InterPro:   IPR019004 [H]

Pfam domain/function: PF09424 YqeY [H]

EC number: NA

Molecular weight: Translated: 16673; Mature: 16541

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKEQINNDIKDAMRAKDKNLLNALRLISAAVKQIEVDERIEVDDERMLVILDKMSKQR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
KESIAQFEKASRDDLVAQEQFELNVISKYLPEPLTDNEIEELIKDAIKSTGAEKMSDMGK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
VMAILKPKLQGRADMAQVSARIKAKLS
HHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIKEQINNDIKDAMRAKDKNLLNALRLISAAVKQIEVDERIEVDDERMLVILDKMSKQR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
KESIAQFEKASRDDLVAQEQFELNVISKYLPEPLTDNEIEELIKDAIKSTGAEKMSDMGK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
VMAILKPKLQGRADMAQVSARIKAKLS
HHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 9023197 [H]