Click here to switch to the map view.

The map label for this gene is ytfH [C]

Identifier: 148359670

GI number: 148359670

Start: 2471131

End: 2471607

Strand: Reverse

Name: ytfH [C]

Synonym: LPC_1589

Alternate gene names: 148359670

Gene position: 2471607-2471131 (Counterclockwise)

Preceding gene: 148359673

Following gene: 148359669

Centisome position: 69.11

GC content: 34.38

Gene sequence:

>477_bases
ATGGATTCTCCTGATTCATTAAAATACTGTCCAATCCAGTATGAAAGATCTACAATATTAAAAAAAGTAAGCACTTTTCA
GTTCACTAAGTACTTTGTGGTACAAATTATTGAAATGGATGAAAAAAAAATAATACAAAAAAAAGCTCCCATTAAGACTG
CATCAATGGTAGAGGCTATCTATGGTTGTAAGTGGTCCTTGACTATCTATTCTCTTTTACGAAATGGAATCAATCGACCA
GGGGAAATGGTACGAAGCGTTGAAGGACTATCAACAAAAGTTTTAAACCAATGCTTGCGGAAGAATATTGAATTTGGGAT
TCTCGGCAGAAATACCTTTCATGAGATCCCCCCCAGAGTTGAGTACTTTGTGACTCCTTTTGGAGAAAAGTTTTTAAAAA
TTCTGGATCAAATAGAAGAGTTGAACGAGCAAATCAGGGATTATCAACAAATCGAATTCCACAATAATGATAGTTAA

Upstream 100 bases:

>100_bases
GGTAATTAACAGCTCCATATTGTTACTTGAAAGTTTTTTTGCAGTTTCAAGGCCCATACCACTAGAGCCGCCAATAATAA
TAGCTAAATTTTGATTGAAC

Downstream 100 bases:

>100_bases
GATTTGTTATAAAAGCTCCATTGCTAATCGACTGCAAGTGAATTATGGCTCACAATATTCACCAACGTAATGAGACATCG
CTAGTCCGTATCATTATTAA

Product: MarR family transporter transcriptional regulator

Products: NA

Alternate protein names: HxlR Family Transcriptional Regulator; Transcriptional Regulator HxlR Family Protein; MarR Family Transporter Transcriptional Regulator; Transcriptional Regulator HxlR Family

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MDSPDSLKYCPIQYERSTILKKVSTFQFTKYFVVQIIEMDEKKIIQKKAPIKTASMVEAIYGCKWSLTIYSLLRNGINRP
GEMVRSVEGLSTKVLNQCLRKNIEFGILGRNTFHEIPPRVEYFVTPFGEKFLKILDQIEELNEQIRDYQQIEFHNNDS

Sequences:

>Translated_158_residues
MDSPDSLKYCPIQYERSTILKKVSTFQFTKYFVVQIIEMDEKKIIQKKAPIKTASMVEAIYGCKWSLTIYSLLRNGINRP
GEMVRSVEGLSTKVLNQCLRKNIEFGILGRNTFHEIPPRVEYFVTPFGEKFLKILDQIEELNEQIRDYQQIEFHNNDS
>Mature_158_residues
MDSPDSLKYCPIQYERSTILKKVSTFQFTKYFVVQIIEMDEKKIIQKKAPIKTASMVEAIYGCKWSLTIYSLLRNGINRP
GEMVRSVEGLSTKVLNQCLRKNIEFGILGRNTFHEIPPRVEYFVTPFGEKFLKILDQIEELNEQIRDYQQIEFHNNDS

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18534; Mature: 18534

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSPDSLKYCPIQYERSTILKKVSTFQFTKYFVVQIIEMDEKKIIQKKAPIKTASMVEAI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YGCKWSLTIYSLLRNGINRPGEMVRSVEGLSTKVLNQCLRKNIEFGILGRNTFHEIPPRV
HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCC
EYFVTPFGEKFLKILDQIEELNEQIRDYQQIEFHNNDS
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDSPDSLKYCPIQYERSTILKKVSTFQFTKYFVVQIIEMDEKKIIQKKAPIKTASMVEAI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YGCKWSLTIYSLLRNGINRPGEMVRSVEGLSTKVLNQCLRKNIEFGILGRNTFHEIPPRV
HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCC
EYFVTPFGEKFLKILDQIEELNEQIRDYQQIEFHNNDS
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA