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The map label for this gene is yfgL [H]

Identifier: 148359076

GI number: 148359076

Start: 1773303

End: 1774400

Strand: Reverse

Name: yfgL [H]

Synonym: LPC_0963

Alternate gene names: 148359076

Gene position: 1774400-1773303 (Counterclockwise)

Preceding gene: 148359077

Following gene: 148359075

Centisome position: 49.61

GC content: 40.53

Gene sequence:

>1098_bases
GTGGATGATTATATGCTCGGTAAGGATAATACGCCCCAACCCAAAGAGCTAAAAGAAATTCAGCCCAAGGTTAAAATGGC
ACAAAGCTGGACAACTCCAGTTGGAAAGGCTCATAAAACAAATGAGTATTTAAATATCAAACCAGCTATACGTGGCGATA
TAATTTATACTGCAGATGCAAGTGGATTGGTTCAGGCAGTTAACAGGAAAGATGGTCAGATAAAGTGGTCTACCGCATTA
AAAAATAATATAGTTAGTGGGCCAACTGTAGCTGCTGGTTATGTTGTTGTAGGAACTAATGCCTCCACATTGGTATTACT
TAATCAATCGGACGGAAAAGAGATATGGCAGAATAAAGTATCTGCTGAAGTATTAGCTCCTCCTGCTATCTCACATCAGA
AGGTCATTGCAAAAACCATTGATGGTAAAGTGTATGCAATTGATGCGGTAAACGGCAAGCAACTGTGGGTTGCAGATCAT
GGCGCTCCCAGCCTGGTGTTAAAAGCCAGCTCGTCCCCTATCATTGTCGACGATCTGGTTCTTGTCGGATTTTCCGATGG
CAAATTAGATGCTTTGGAATTACAGACAGGACGATTGATCTGGCAAAGAAGCATTGCTTATGGAACAGGAGCTAGTGATG
TCGAACGTTTAGTTGATATTGATTCTGACCCTATAATAAGCAATAACGTCGCCTATTTGGCAACTTATCAGGGATATGTT
GGAGCACTATCACTGTCTAATGGCCAATTCATATGGAGAAAGCCAGCATCTGTTTATAAAAATATGCTTTTAAGTCATAA
TAATCTGTATTTTACAGACAGCAATGATGTCTTGTGGTCTTTGAACAGTAGCACAGGACAGGTCAACTGGAAGCAAACCT
CCCTAAAGGCAAGAGGGCTTACTGCACCTGCATTAGTTGGAGGAAATTTAGCTGTTGGTGATAAAGCAGGATATTTACAT
ATCCTATCAACTCAAACAGGTGAGTTACTTGGACGTTCTCAGCTTTCTGGTGGAGTAACAGTATCACCGAGTGTTTCTGG
TAAAAATATGTATGTATTAACCAATAATGGAATGCTCAATCAACTTTCAGTGAGCTAA

Upstream 100 bases:

>100_bases
AAAGGTAAAAGCAGCTTAATTTTATTATAAAGGTTTGTTTTTTATGAAGATTAGAATATTAGTTTTAATACTATGTGCCT
TAACTCAAGGATGCACATAT

Downstream 100 bases:

>100_bases
TAAAATGATCCCTGTCATCGCTTTAGTTGGGCGTCCCAATGTTGGAAAGTCTACTTTGTTTAATAGAATTACTAAAACGC
AGGATGCTCTTGTCGCAGAT

Product: PQQ (pyrrolo quinoline) WD40-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MDDYMLGKDNTPQPKELKEIQPKVKMAQSWTTPVGKAHKTNEYLNIKPAIRGDIIYTADASGLVQAVNRKDGQIKWSTAL
KNNIVSGPTVAAGYVVVGTNASTLVLLNQSDGKEIWQNKVSAEVLAPPAISHQKVIAKTIDGKVYAIDAVNGKQLWVADH
GAPSLVLKASSSPIIVDDLVLVGFSDGKLDALELQTGRLIWQRSIAYGTGASDVERLVDIDSDPIISNNVAYLATYQGYV
GALSLSNGQFIWRKPASVYKNMLLSHNNLYFTDSNDVLWSLNSSTGQVNWKQTSLKARGLTAPALVGGNLAVGDKAGYLH
ILSTQTGELLGRSQLSGGVTVSPSVSGKNMYVLTNNGMLNQLSVS

Sequences:

>Translated_365_residues
MDDYMLGKDNTPQPKELKEIQPKVKMAQSWTTPVGKAHKTNEYLNIKPAIRGDIIYTADASGLVQAVNRKDGQIKWSTAL
KNNIVSGPTVAAGYVVVGTNASTLVLLNQSDGKEIWQNKVSAEVLAPPAISHQKVIAKTIDGKVYAIDAVNGKQLWVADH
GAPSLVLKASSSPIIVDDLVLVGFSDGKLDALELQTGRLIWQRSIAYGTGASDVERLVDIDSDPIISNNVAYLATYQGYV
GALSLSNGQFIWRKPASVYKNMLLSHNNLYFTDSNDVLWSLNSSTGQVNWKQTSLKARGLTAPALVGGNLAVGDKAGYLH
ILSTQTGELLGRSQLSGGVTVSPSVSGKNMYVLTNNGMLNQLSVS
>Mature_365_residues
MDDYMLGKDNTPQPKELKEIQPKVKMAQSWTTPVGKAHKTNEYLNIKPAIRGDIIYTADASGLVQAVNRKDGQIKWSTAL
KNNIVSGPTVAAGYVVVGTNASTLVLLNQSDGKEIWQNKVSAEVLAPPAISHQKVIAKTIDGKVYAIDAVNGKQLWVADH
GAPSLVLKASSSPIIVDDLVLVGFSDGKLDALELQTGRLIWQRSIAYGTGASDVERLVDIDSDPIISNNVAYLATYQGYV
GALSLSNGQFIWRKPASVYKNMLLSHNNLYFTDSNDVLWSLNSSTGQVNWKQTSLKARGLTAPALVGGNLAVGDKAGYLH
ILSTQTGELLGRSQLSGGVTVSPSVSGKNMYVLTNNGMLNQLSVS

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=364, Percent_Identity=30.7692307692308, Blast_Score=207, Evalue=7e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 39125; Mature: 39125

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDYMLGKDNTPQPKELKEIQPKVKMAQSWTTPVGKAHKTNEYLNIKPAIRGDIIYTADA
CCCCCCCCCCCCCCHHHHHHCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEEECC
SGLVQAVNRKDGQIKWSTALKNNIVSGPTVAAGYVVVGTNASTLVLLNQSDGKEIWQNKV
HHHHHHHCCCCCEEEEEEHHHCCCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHCC
SAEVLAPPAISHQKVIAKTIDGKVYAIDAVNGKQLWVADHGAPSLVLKASSSPIIVDDLV
CCEEECCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEEE
LVGFSDGKLDALELQTGRLIWQRSIAYGTGASDVERLVDIDSDPIISNNVAYLATYQGYV
EEECCCCCEEEEEEECCEEEEEEEEECCCCHHHHHHHHCCCCCCEECCCEEEEEEECCEE
GALSLSNGQFIWRKPASVYKNMLLSHNNLYFTDSNDVLWSLNSSTGQVNWKQTSLKARGL
EEEEECCCCEEEECHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCEEEEEECCEEECCC
TAPALVGGNLAVGDKAGYLHILSTQTGELLGRSQLSGGVTVSPSVSGKNMYVLTNNGMLN
CCCEEECCCEEECCCCCEEEEEECCCHHHHHHHHCCCCEEECCCCCCCEEEEEECCCCCE
QLSVS
EEECC
>Mature Secondary Structure
MDDYMLGKDNTPQPKELKEIQPKVKMAQSWTTPVGKAHKTNEYLNIKPAIRGDIIYTADA
CCCCCCCCCCCCCCHHHHHHCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEEECC
SGLVQAVNRKDGQIKWSTALKNNIVSGPTVAAGYVVVGTNASTLVLLNQSDGKEIWQNKV
HHHHHHHCCCCCEEEEEEHHHCCCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHCC
SAEVLAPPAISHQKVIAKTIDGKVYAIDAVNGKQLWVADHGAPSLVLKASSSPIIVDDLV
CCEEECCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEEE
LVGFSDGKLDALELQTGRLIWQRSIAYGTGASDVERLVDIDSDPIISNNVAYLATYQGYV
EEECCCCCEEEEEEECCEEEEEEEEECCCCHHHHHHHHCCCCCCEECCCEEEEEEECCEE
GALSLSNGQFIWRKPASVYKNMLLSHNNLYFTDSNDVLWSLNSSTGQVNWKQTSLKARGL
EEEEECCCCEEEECHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCEEEEEECCEEECCC
TAPALVGGNLAVGDKAGYLHILSTQTGELLGRSQLSGGVTVSPSVSGKNMYVLTNNGMLN
CCCEEECCCEEECCCCCEEEEEECCCHHHHHHHHCCCCEEECCCCCCCEEEEEECCCCCE
QLSVS
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]