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The map label for this gene is scpA [H]

Identifier: 148358976

GI number: 148358976

Start: 1658906

End: 1659697

Strand: Direct

Name: scpA [H]

Synonym: LPC_0861

Alternate gene names: 148358976

Gene position: 1658906-1659697 (Clockwise)

Preceding gene: 148358975

Following gene: 148358977

Centisome position: 46.38

GC content: 38.89

Gene sequence:

>792_bases
ATGAATATCGATTTGCAGCCTGCGCCTGTAGTCAAAGCGGTGGTGGATGGTAAGGAAATTACTCAGTTTCCAGAGGATTT
ATATATTCCTCCTGATGCATTGGAGGTATTACTGGACTCTTTTACCGGGCCATTAGATTTATTGCTGTATTTAATCCGCA
AGCAAAATATTGATATTCTTGATATTCCCATGACAAGTATAACCAACCAGTATTTACAATATATCCAGCTCATGGAAAAT
CGAAGAATGGAGCTGGCTGCCGAGTATTTATTAATGGCTGCCATGTTAGCTGAAATCAAGTCACGTTTATTATTGCCAGT
CACACCAGATTCAGAGGAGGAGGAAGAAGATCCACGCATGACTCTGGTAAGACAGTTGCAAGCTTATGAGCAAATAAAAC
AAGCGGCTGAGTTATTGGATGGATTGCCAAGACAAGACAGAGATAATTTTACAATTCAGGTTAGTCCAGATGAGGTTGAA
GCAATTAAAGTTTATCCTGAAGTTGAGTTATCTGAATTAGTCGAGGCTATGAAAGTTTTGCTGAAACGTGAAGAGCATTA
TTCCAAACATCAAGTTTCCAGGGAGTTAATGTCTGTTCGTGAACGAATGAGTCGTATTCTCTTTCAATTGCAGCATCAAA
AAACTTTGGAATTTAGCCAATTATATACTCTTGAAGAGGGAAGGATGGGATTGGTTGTGAGTTTTTTAGCTATTCTTGAA
CTGGCTAAGCAGTCTTTATTGATCATTACGCAAACTCAGCCATTTTCACCTATACATTTGCAGGCTGCATAA

Upstream 100 bases:

>100_bases
GTTCGGTAAAACGTATTGTAGCGGAAGGAAGCGAAGCGGCCAGAGAAGAAGGAAACAAGACTTTAAATACGGTCAGAGAA
GTCATGGGGCTTGATTATTA

Downstream 100 bases:

>100_bases
AATGATTGACAATGAATTAAAAAATATTGTTGAAGCTTTGATATTATCCAGTAATGAGCCCGTTACTTTAGAAAAAATAC
AAGAAACCTTTGATGAGTGG

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNIDLQPAPVVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDILDIPMTSITNQYLQYIQLMEN
RRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRMTLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVSPDEVE
AIKVYPEVELSELVEAMKVLLKREEHYSKHQVSRELMSVRERMSRILFQLQHQKTLEFSQLYTLEEGRMGLVVSFLAILE
LAKQSLLIITQTQPFSPIHLQAA

Sequences:

>Translated_263_residues
MNIDLQPAPVVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDILDIPMTSITNQYLQYIQLMEN
RRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRMTLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVSPDEVE
AIKVYPEVELSELVEAMKVLLKREEHYSKHQVSRELMSVRERMSRILFQLQHQKTLEFSQLYTLEEGRMGLVVSFLAILE
LAKQSLLIITQTQPFSPIHLQAA
>Mature_263_residues
MNIDLQPAPVVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDILDIPMTSITNQYLQYIQLMEN
RRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRMTLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVSPDEVE
AIKVYPEVELSELVEAMKVLLKREEHYSKHQVSRELMSVRERMSRILFQLQHQKTLEFSQLYTLEEGRMGLVVSFLAILE
LAKQSLLIITQTQPFSPIHLQAA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30350; Mature: 30350

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDLQPAPVVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDIL
CCCCCCCCHHHHHHHCCHHHHHCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE
DIPMTSITNQYLQYIQLMENRRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHH
TLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVSPDEVEAIKVYPEVELSELVEAMKVL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHH
LKREEHYSKHQVSRELMSVRERMSRILFQLQHQKTLEFSQLYTLEEGRMGLVVSFLAILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LAKQSLLIITQTQPFSPIHLQAA
HHHCCEEEEECCCCCCCEEEECC
>Mature Secondary Structure
MNIDLQPAPVVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDIL
CCCCCCCCHHHHHHHCCHHHHHCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE
DIPMTSITNQYLQYIQLMENRRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHH
TLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVSPDEVEAIKVYPEVELSELVEAMKVL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHH
LKREEHYSKHQVSRELMSVRERMSRILFQLQHQKTLEFSQLYTLEEGRMGLVVSFLAILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LAKQSLLIITQTQPFSPIHLQAA
HHHCCEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]