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The map label for this gene is scpB [H]

Identifier: 148358977

GI number: 148358977

Start: 1659699

End: 1660280

Strand: Direct

Name: scpB [H]

Synonym: LPC_0862

Alternate gene names: 148358977

Gene position: 1659699-1660280 (Clockwise)

Preceding gene: 148358976

Following gene: 148358978

Centisome position: 46.41

GC content: 37.97

Gene sequence:

>582_bases
ATGATTGACAATGAATTAAAAAATATTGTTGAAGCTTTGATATTATCCAGTAATGAGCCCGTTACTTTAGAAAAAATACA
AGAAACCTTTGATGAGTGGCAAAGACCAACATTAGAAGATTTGCAGGCTATAATAGAGAGCTTAAAGGTAGATTATTCTT
CCCGAGCTTTTGAGCTTATCCAGGTTGCAAGTGGTTTTAAGGTACAAACGAAATCCAAATATGCTACTTGGGTTGCTCGT
CTCCAAATCGAGAAGCCAGCAAAGTATTCGCGCGCACTGCTTGAAACTTTGGCAATAATTGCTTACAAGCAACCTGTTAC
GCGCGCTGATATTGAAGACATTAGAGGAGTTGCCGTTAACAGCCAGATTATAAAAACGTTAATGGAGAGGGAATGGATTC
GTATAGCAGGCTATAAAGATGTAGTAGGGAAGCCGGCTGTTTATACAACGACAAAAGAATTTTTAAATTACTTTAACTTA
AATTACTTAAGTGAACTTCCTCCCTTACCTGAAATAATGGATACATTAACCCTGCACGAGGCAACCCAACCTATAAAAGA
GTGTACGCAAAATGAGCAGTGA

Upstream 100 bases:

>100_bases
GTTGTGAGTTTTTTAGCTATTCTTGAACTGGCTAAGCAGTCTTTATTGATCATTACGCAAACTCAGCCATTTTCACCTAT
ACATTTGCAGGCTGCATAAA

Downstream 100 bases:

>100_bases
AAGATTACAGAAAATATTAAGTCAAGCCGGACTTGGATCTCGTCGTGAAATGGAGCGGTGGATTGATAATGGTTGGGTGC
AGGTTAATGGCAAACCAGCT

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MIDNELKNIVEALILSSNEPVTLEKIQETFDEWQRPTLEDLQAIIESLKVDYSSRAFELIQVASGFKVQTKSKYATWVAR
LQIEKPAKYSRALLETLAIIAYKQPVTRADIEDIRGVAVNSQIIKTLMEREWIRIAGYKDVVGKPAVYTTTKEFLNYFNL
NYLSELPPLPEIMDTLTLHEATQPIKECTQNEQ

Sequences:

>Translated_193_residues
MIDNELKNIVEALILSSNEPVTLEKIQETFDEWQRPTLEDLQAIIESLKVDYSSRAFELIQVASGFKVQTKSKYATWVAR
LQIEKPAKYSRALLETLAIIAYKQPVTRADIEDIRGVAVNSQIIKTLMEREWIRIAGYKDVVGKPAVYTTTKEFLNYFNL
NYLSELPPLPEIMDTLTLHEATQPIKECTQNEQ
>Mature_193_residues
MIDNELKNIVEALILSSNEPVTLEKIQETFDEWQRPTLEDLQAIIESLKVDYSSRAFELIQVASGFKVQTKSKYATWVAR
LQIEKPAKYSRALLETLAIIAYKQPVTRADIEDIRGVAVNSQIIKTLMEREWIRIAGYKDVVGKPAVYTTTKEFLNYFNL
NYLSELPPLPEIMDTLTLHEATQPIKECTQNEQ

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 22167; Mature: 22167

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDNELKNIVEALILSSNEPVTLEKIQETFDEWQRPTLEDLQAIIESLKVDYSSRAFELI
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
QVASGFKVQTKSKYATWVARLQIEKPAKYSRALLETLAIIAYKQPVTRADIEDIRGVAVN
HHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH
SQIIKTLMEREWIRIAGYKDVVGKPAVYTTTKEFLNYFNLNYLSELPPLPEIMDTLTLHE
HHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHH
ATQPIKECTQNEQ
HHHHHHHHHCCCC
>Mature Secondary Structure
MIDNELKNIVEALILSSNEPVTLEKIQETFDEWQRPTLEDLQAIIESLKVDYSSRAFELI
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
QVASGFKVQTKSKYATWVARLQIEKPAKYSRALLETLAIIAYKQPVTRADIEDIRGVAVN
HHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH
SQIIKTLMEREWIRIAGYKDVVGKPAVYTTTKEFLNYFNLNYLSELPPLPEIMDTLTLHE
HHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHH
ATQPIKECTQNEQ
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]