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The map label for this gene is yebC [C]

Identifier: 148358828

GI number: 148358828

Start: 1495298

End: 1496041

Strand: Direct

Name: yebC [C]

Synonym: LPC_0711

Alternate gene names: 148358828

Gene position: 1495298-1496041 (Clockwise)

Preceding gene: 148358826

Following gene: 148358829

Centisome position: 41.81

GC content: 41.8

Gene sequence:

>744_bases
ATGGCTGGTCATAGTAAATGGGCTAATATCAAATTCCGTAAAGGCGTACAGGATGCCAAAAGAGGAAAAATATTTACTAA
ATTAATTCGTGAAATTACTGTAGCTGCCCGCATGGGAGGAGGAGATGAGTCAAGTAATCCACGTTTGAGAGATGCTGTTA
AAAAAGCACTGAATGCCAATATGAAGCGCGATACCATCGATAATGCTGTCAAGCGAGGGGTGGGGGGAGCTGATGGCGAA
GCAATGATAGCTATGCGTTATGAGGGTTACGGGCCAGGTGGGGTTGCTATATTGGTAGATTGTTTGTCTGACAATAAAAA
TCGAACGGTATCGGAAGTTCGGCATGCTTTTTCAAAACATGGGGGTAATTTGGGCACGGATGGCTCGGTATCCTATCTTT
TCACTAATCAAGGTGAAATTCTCATGGCTTCTAATCAGCCGGAAGATAAGGTGATGGAGATTGCAATCGATGCAGGTGCT
TCTGATGTTGCTGTAGAGGACAGTCAGGTAGAGATCATTACCCCTGTAGAAGCTTATCACACCGTCTTAAATGCTTTACA
GGATGCCGGTTTGGAGGTTGAGCAATCTCATTTAACTATGCGTGCACAAACCTTGGTTCCAATTAGTGATGAAACGGCTG
AAAGTTTAATTAAACTGATTGATATGCTGGAAGATTTGGATGATGTCCAAGAAGTTTACAGCAATGCTGAATTTTCTGAA
AAAATATTAGAATCAATGAATTAA

Upstream 100 bases:

>100_bases
AAAAGTTCAAATTGTCGAGAGCATCGTTCGCTTTAGTCATTCTTTTTGATGTTAGAGCATTGTATAATCTCCTAATAAAA
ATTCATTTAGAGGTGATGTA

Downstream 100 bases:

>100_bases
TGACGATTATATTAGGGATAGATCCAGGCTCACGGGTTACAGGATATGGATTGATTAAAGAATCTGACCGTAAAATCGCG
TACATCGATAGCGGCTGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNANMKRDTIDNAVKRGVGGADGE
AMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKHGGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGA
SDVAVEDSQVEIITPVEAYHTVLNALQDAGLEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
KILESMN

Sequences:

>Translated_247_residues
MAGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNANMKRDTIDNAVKRGVGGADGE
AMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKHGGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGA
SDVAVEDSQVEIITPVEAYHTVLNALQDAGLEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
KILESMN
>Mature_246_residues
AGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNANMKRDTIDNAVKRGVGGADGEA
MIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKHGGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGAS
DVAVEDSQVEIITPVEAYHTVLNALQDAGLEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSEK
ILESMN

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=29.5546558704453, Blast_Score=106, Evalue=2e-23,
Organism=Escherichia coli, GI1788171, Length=247, Percent_Identity=55.4655870445344, Blast_Score=280, Evalue=8e-77,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=39.9141630901288, Blast_Score=156, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=26.6393442622951, Blast_Score=84, Evalue=9e-17,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=6e-30,
Organism=Drosophila melanogaster, GI24583305, Length=249, Percent_Identity=28.1124497991968, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26815; Mature: 26683

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNAN
CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
MKRDTIDNAVKRGVGGADGEAMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKH
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHEEEEHHCCCCCCCHHHHHHHHHHC
GGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGASDVAVEDSQVEIITPVEAYH
CCCCCCCCCEEEEEECCCCEEEECCCCHHHHEEEEEECCCCCEEECCCCEEEECHHHHHH
TVLNALQDAGLEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
HHHHHHHHCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KILESMN
HHHHHCC
>Mature Secondary Structure 
AGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNAN
CCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
MKRDTIDNAVKRGVGGADGEAMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKH
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHEEEEHHCCCCCCCHHHHHHHHHHC
GGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGASDVAVEDSQVEIITPVEAYH
CCCCCCCCCEEEEEECCCCEEEECCCCHHHHEEEEEECCCCCEEECCCCEEEECHHHHHH
TVLNALQDAGLEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
HHHHHHHHCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KILESMN
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA