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The map label for this gene is 148358436

Identifier: 148358436

GI number: 148358436

Start: 315328

End: 316725

Strand: Direct

Name: 148358436

Synonym: LPC_0302

Alternate gene names: NA

Gene position: 315328-316725 (Clockwise)

Preceding gene: 148358435

Following gene: 148358437

Centisome position: 8.82

GC content: 39.48

Gene sequence:

>1398_bases
ATGATTTGTTTTCCTTCAGGCAAAAACAGATTGATGGTTTTATGTTTGTTCTTGATGCTGTCATTCAAGTGTTTTCCAAT
ACCAGCCAAACCTTTGCTGCTTGATGCCGTCCTTAAAAGTGTTGATCGAAGTTACCCGCAGATAGTCATAGCGCGTCTTG
AAATCAGAAAAGCGGAAGGTGATTATGTCAATGCATTAGGAAAATTTGACCCCTCTTTCGATGTGAATCCCCGCTTCCAG
CCGGTCGGGGGGTATATTAATAATTACGCAGATAATCTTTTTAATGTGCCAACCCTCTATAATGGACTTAAATTGTTTGG
AGGCTATCGTATTGGCAGAGGCGATTGGCCCATTTACTATCAAAATTACCTGACTAACTCTGGTGGTGAGTATCGTGCGG
GCCTTTCTTTACCTTTGCTTAGAGACAGGCGAATTGATAAAGAGCGTACCGAACTTTTTACAAGAGAAGAAACAATTCGC
ATGAAACAGCAGGATGCTGCTGCCACAAAAATTAAAATTTATCAGGAAACCATTAAAGCCTATTGGCAATGGGTGGAGGC
GGGTTTCCAGTTAAGAACTTTCAGGCATTTGCTAAATTTAGCGAAAGAGCGGCAAAATGCGATTATTCAACAAGCTCAAC
AAGGTGATTTGCCTAGACTTGCCATTGCAGAAAATTTACAACTTATTGTTCAACGTGAACAACTGGTCAATCAAGGAGAA
ATGTTATTGGCGCAGGCTGGCATCAATCTTTCACTTTACTATCGTGACGCGAATGGCAAACCGCAAAAACCGGATGAAAG
TCAATTACCGGCAACATTTCCTGCCCAACCAATTCGAGTATCCAATAGTATTTCACAGTTACAACGGCATCCTGTTTTGC
GTAAATTGGAGAATTATTCAAAAATTGTTAAATTAAAACAAAATTTAGCAAGAAATGAGCTTCTTCCTAATCTTGATGCG
ACAGCTTATACCTTTAAACAATATGGAACAGGCGGTTATCCTTTATTGATCCCTCAGGCTGCTATGATCGGCGTGAATTT
TAAATTTCCTATTTTTCAACGTGAAGCAAGAGGAAAGCTTATCAGCACCACGAGCGAATTACAGCAAGTAAAAACGGAAA
TGAAGTTTACCTACGAACAGTTAAATAACGAGCTGTCCAATCTCTTGGTTGCAATAAGAATATATCAGCAGCAAGTGGTT
TTGCTTAATAAAGAGTTAAATCTTGCACGGCAAGTAGAGAAGGGAGAAACCAAGAGATTTTATGAAGGTGATAGCACGCT
TTTTTTAGTGAATCAACGTGAACAAACAACAGCGCAAGTCAAGTTAAATTGGATTAATGCAGAAGTCAATTTACAAGAGG
CTACGGCTTTAGCGAGATTTTTTTCTTCCACGCAATAA

Upstream 100 bases:

>100_bases
TGCATGGGTGGATCCAATTGGGTCAAGTTCCTTTATGGTATGAGCTTTGGCGTCAGTATAATGGTTTCCCACCGGAAAGT
AATCGCGAGAATAAAGCATC

Downstream 100 bases:

>100_bases
TAACGAATATCAATTGGAGACCCAATTGATAAATAGCTTGCTTACCCCACAGGTGAGCAAAAGATAATTGTTAGCTACTT
GCACTCCCCCTTGGCATATG

Product: multidrug efflux protein, outer membrane component

Products: NA

Alternate protein names: Outer Membrane Component Of Multidrug Efflux Pump; Outer Membrane Protein-Like Protein; Outer Membrane Protein; Outer Membrane Protein-Like; Signal Peptide; Multidrug Efflux Protein Outer Membrane Component

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MICFPSGKNRLMVLCLFLMLSFKCFPIPAKPLLLDAVLKSVDRSYPQIVIARLEIRKAEGDYVNALGKFDPSFDVNPRFQ
PVGGYINNYADNLFNVPTLYNGLKLFGGYRIGRGDWPIYYQNYLTNSGGEYRAGLSLPLLRDRRIDKERTELFTREETIR
MKQQDAAATKIKIYQETIKAYWQWVEAGFQLRTFRHLLNLAKERQNAIIQQAQQGDLPRLAIAENLQLIVQREQLVNQGE
MLLAQAGINLSLYYRDANGKPQKPDESQLPATFPAQPIRVSNSISQLQRHPVLRKLENYSKIVKLKQNLARNELLPNLDA
TAYTFKQYGTGGYPLLIPQAAMIGVNFKFPIFQREARGKLISTTSELQQVKTEMKFTYEQLNNELSNLLVAIRIYQQQVV
LLNKELNLARQVEKGETKRFYEGDSTLFLVNQREQTTAQVKLNWINAEVNLQEATALARFFSSTQ

Sequences:

>Translated_465_residues
MICFPSGKNRLMVLCLFLMLSFKCFPIPAKPLLLDAVLKSVDRSYPQIVIARLEIRKAEGDYVNALGKFDPSFDVNPRFQ
PVGGYINNYADNLFNVPTLYNGLKLFGGYRIGRGDWPIYYQNYLTNSGGEYRAGLSLPLLRDRRIDKERTELFTREETIR
MKQQDAAATKIKIYQETIKAYWQWVEAGFQLRTFRHLLNLAKERQNAIIQQAQQGDLPRLAIAENLQLIVQREQLVNQGE
MLLAQAGINLSLYYRDANGKPQKPDESQLPATFPAQPIRVSNSISQLQRHPVLRKLENYSKIVKLKQNLARNELLPNLDA
TAYTFKQYGTGGYPLLIPQAAMIGVNFKFPIFQREARGKLISTTSELQQVKTEMKFTYEQLNNELSNLLVAIRIYQQQVV
LLNKELNLARQVEKGETKRFYEGDSTLFLVNQREQTTAQVKLNWINAEVNLQEATALARFFSSTQ
>Mature_465_residues
MICFPSGKNRLMVLCLFLMLSFKCFPIPAKPLLLDAVLKSVDRSYPQIVIARLEIRKAEGDYVNALGKFDPSFDVNPRFQ
PVGGYINNYADNLFNVPTLYNGLKLFGGYRIGRGDWPIYYQNYLTNSGGEYRAGLSLPLLRDRRIDKERTELFTREETIR
MKQQDAAATKIKIYQETIKAYWQWVEAGFQLRTFRHLLNLAKERQNAIIQQAQQGDLPRLAIAENLQLIVQREQLVNQGE
MLLAQAGINLSLYYRDANGKPQKPDESQLPATFPAQPIRVSNSISQLQRHPVLRKLENYSKIVKLKQNLARNELLPNLDA
TAYTFKQYGTGGYPLLIPQAAMIGVNFKFPIFQREARGKLISTTSELQQVKTEMKFTYEQLNNELSNLLVAIRIYQQQVV
LLNKELNLARQVEKGETKRFYEGDSTLFLVNQREQTTAQVKLNWINAEVNLQEATALARFFSSTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53404; Mature: 53404

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICFPSGKNRLMVLCLFLMLSFKCFPIPAKPLLLDAVLKSVDRSYPQIVIARLEIRKAEG
CEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHEEEEEHHEECCCC
DYVNALGKFDPSFDVNPRFQPVGGYINNYADNLFNVPTLYNGLKLFGGYRIGRGDWPIYY
CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCEEECCCCCCEEE
QNYLTNSGGEYRAGLSLPLLRDRRIDKERTELFTREETIRMKQQDAAATKIKIYQETIKA
EHHCCCCCCCEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWQWVEAGFQLRTFRHLLNLAKERQNAIIQQAQQGDLPRLAIAENLQLIVQREQLVNQGE
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
MLLAQAGINLSLYYRDANGKPQKPDESQLPATFPAQPIRVSNSISQLQRHPVLRKLENYS
EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCHHHHHHHHHH
KIVKLKQNLARNELLPNLDATAYTFKQYGTGGYPLLIPQAAMIGVNFKFPIFQREARGKL
HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEECCCEEEECCEECCCHHHHHCCCE
ISTTSELQQVKTEMKFTYEQLNNELSNLLVAIRIYQQQVVLLNKELNLARQVEKGETKRF
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCCEE
YEGDSTLFLVNQREQTTAQVKLNWINAEVNLQEATALARFFSSTQ
ECCCCEEEEEECCCCCEEEEEEEEEEEEECHHHHHHHHHHHHCCC
>Mature Secondary Structure
MICFPSGKNRLMVLCLFLMLSFKCFPIPAKPLLLDAVLKSVDRSYPQIVIARLEIRKAEG
CEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHEEEEEHHEECCCC
DYVNALGKFDPSFDVNPRFQPVGGYINNYADNLFNVPTLYNGLKLFGGYRIGRGDWPIYY
CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCEEECCCCCCEEE
QNYLTNSGGEYRAGLSLPLLRDRRIDKERTELFTREETIRMKQQDAAATKIKIYQETIKA
EHHCCCCCCCEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWQWVEAGFQLRTFRHLLNLAKERQNAIIQQAQQGDLPRLAIAENLQLIVQREQLVNQGE
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
MLLAQAGINLSLYYRDANGKPQKPDESQLPATFPAQPIRVSNSISQLQRHPVLRKLENYS
EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCHHHHHHHHHH
KIVKLKQNLARNELLPNLDATAYTFKQYGTGGYPLLIPQAAMIGVNFKFPIFQREARGKL
HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEECCCEEEECCEECCCHHHHHCCCE
ISTTSELQQVKTEMKFTYEQLNNELSNLLVAIRIYQQQVVLLNKELNLARQVEKGETKRF
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCCEE
YEGDSTLFLVNQREQTTAQVKLNWINAEVNLQEATALARFFSSTQ
ECCCCEEEEEECCCCCEEEEEEEEEEEEECHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA