| Definition | Legionella pneumophila str. Corby chromosome, complete genome. |
|---|---|
| Accession | NC_009494 |
| Length | 3,576,470 |
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The map label for this gene is speA [H]
Identifier: 148358145
GI number: 148358145
Start: 8309
End: 10201
Strand: Reverse
Name: speA [H]
Synonym: LPC_0006
Alternate gene names: 148358145
Gene position: 10201-8309 (Counterclockwise)
Preceding gene: 148358146
Following gene: 148358144
Centisome position: 0.29
GC content: 39.25
Gene sequence:
>1893_bases ATGAACAATAATACTCTATCAGATGACAATCTTTACAACATAGAAAATTGGGGCGAGGGATACTTCCGAATTAACTCCAA GGGAAATATTGAAATCAGTAAAAAACCCGGCAAACCAGGTGTTGAACTGCAAACTATAGTTGATGCAGCTGACCGTGCCG GCTTGCATTTACCTTTATTGATCCGTTGTAGTGATATTCTTCATGATAGAGTCCATAGAATATACCAGGCGTTCACCCAG GCTCGAGAAGACACTTATTATGCCGGTAATTATCAGCTGGTTTATCCAATTAAAGTAAACCAGGAACAAAGTGTGGTACG GGAATTGTTAAAATCGCCTGATAATCAGATAGGTCTGGAGGCTGGCAGCAAACCTGAATTGATGGCGGTTATAGGTATGC TGGGTGACCATCAGAGTACTATAGTTTGCAACGGCTATAAAGACACAAGTTATATTCGTACAGCGCTTATTGCTCAACAA ATGGGTCATAAAGTTTTTATTGTTATTGAAAAAAAATCTGAGTTGGACATTATTTTAAAGGAATCTGCACGCCTTCAAAT CAAACCAACATTAGGTGTGCGAATTCGGCTGGTCAGCAAAAGCGCTGGCAAGTGGGAAAATACCGGCGGGGTTAAATCAA AGTTTGGACTAAATGCCAAACAGGTACTTGAACTGATTTTACAATTAAAAGCCAATGATATGCTGGATTGTTTGCAGCTA ATGCACTGCCATTTGGGTTCGCAAATTGCCAACATCCATGACATACGCCATTGCATGCAGGAAGTGGCGAGGTACTATAT TGAGCTACGTCAACTGAATGCTCCGATAGGTACGATTGATGTGGGTGGAGGTCTGAGTGTCGATTATGAGGGGACTCGAT CCAATAAAGGGTGCTCAATGAACTACAGTCTTGTTGAGTACGCTACGCACATCATGTTGGCTTTAAAACACTTATGTCAA GAAGCTGAGATACCAGAGCCTGATCTTATCTCCGAATCAGGACGAGCATTAACAGCCCATCATGCTGTATTAATTTCTAA CATTACGGATGTAGAGATCATCAATAAAGCGCCCGTTCTTCCTGAAATATCGGAAGATGATTCGCATGTCATTCGAGATA TTTACGATACTTATCAAGCCATAACAGATAGCTCGCCCACTGAAATATATAATTACGCAGCTCATTCGCTTAATGAAGCG CATTCCCTTTTCAAGCATGGGGTAATTAGCCTGCAGGAAAAGGCCAAGGTAGAAGCTTTTTATACTAATATTTGTATGGA AATAAAAGATAAACTGGATGAAGAAAATCCAAGTGAAAAAGCTTTGCTAATGAGAATCAATGAATGTATGGCTGCCAAGA TATTTTGTAATATCTCTTTTTTCCAATCTATTCCTGATGCTTGGGCTATTGGTCAGATTTTCCCGGTAGCCCCTATATCT CAGCTTAATAGAACACTTAGTATGCATAGTATCCTACAGGATTTAACCTGCGATTCAGATGGTACAATTAAGCAATACCC TGGAAGTTCCTGCGTTACAACCACATTGATGCTCCCTTCATACGATATCAATAACCCTTATAACATCGGATTTTTCCTGG TTGGTGCCTATCAGGAAATATTGGGTAATCTGCATAACTTGTTTGGAGATACCAATTCTCTAGATGTAAAGCTTTCTGAT GATGGACAATTTGAGCTGGATGATTTAGTCAGCGGCGACACCGTAACAAACGTATTGAATTTAGCCCATTTTGATACCAA AAAGTTAATTCAATCTTATGAAAAGCAATTAATTAAATCTGAACTTCCTAAGGAAAAGGCACTCTCTTACTTAAATGAAT TAAGAAGTATTTTTTCTCAATTAACTTACCTTGATGGAAATATAGCACAGTGA
Upstream 100 bases:
>100_bases CGTGAATTGTGGGGACGATTATTCCCATTTCCCCAACAACGAGAGCCTGAAACTTATCATGAATTAGTCAAATCCCGTTA ATCCTCTTTGGAACGTTAGA
Downstream 100 bases:
>100_bases ATATGAATACAGCACCCAAACAATATGGTTTTTATATGCCTGCTGAATGGTATCCTCATGAACGATGCTGGATGGCATGG CCCTGTCACCATGACACCTG
Product: arginine decarboxylase
Products: NA
Alternate protein names: ADC [H]
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MNNNTLSDDNLYNIENWGEGYFRINSKGNIEISKKPGKPGVELQTIVDAADRAGLHLPLLIRCSDILHDRVHRIYQAFTQ AREDTYYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLEAGSKPELMAVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQ MGHKVFIVIEKKSELDIILKESARLQIKPTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQL MHCHLGSQIANIHDIRHCMQEVARYYIELRQLNAPIGTIDVGGGLSVDYEGTRSNKGCSMNYSLVEYATHIMLALKHLCQ EAEIPEPDLISESGRALTAHHAVLISNITDVEIINKAPVLPEISEDDSHVIRDIYDTYQAITDSSPTEIYNYAAHSLNEA HSLFKHGVISLQEKAKVEAFYTNICMEIKDKLDEENPSEKALLMRINECMAAKIFCNISFFQSIPDAWAIGQIFPVAPIS QLNRTLSMHSILQDLTCDSDGTIKQYPGSSCVTTTLMLPSYDINNPYNIGFFLVGAYQEILGNLHNLFGDTNSLDVKLSD DGQFELDDLVSGDTVTNVLNLAHFDTKKLIQSYEKQLIKSELPKEKALSYLNELRSIFSQLTYLDGNIAQ
Sequences:
>Translated_630_residues MNNNTLSDDNLYNIENWGEGYFRINSKGNIEISKKPGKPGVELQTIVDAADRAGLHLPLLIRCSDILHDRVHRIYQAFTQ AREDTYYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLEAGSKPELMAVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQ MGHKVFIVIEKKSELDIILKESARLQIKPTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQL MHCHLGSQIANIHDIRHCMQEVARYYIELRQLNAPIGTIDVGGGLSVDYEGTRSNKGCSMNYSLVEYATHIMLALKHLCQ EAEIPEPDLISESGRALTAHHAVLISNITDVEIINKAPVLPEISEDDSHVIRDIYDTYQAITDSSPTEIYNYAAHSLNEA HSLFKHGVISLQEKAKVEAFYTNICMEIKDKLDEENPSEKALLMRINECMAAKIFCNISFFQSIPDAWAIGQIFPVAPIS QLNRTLSMHSILQDLTCDSDGTIKQYPGSSCVTTTLMLPSYDINNPYNIGFFLVGAYQEILGNLHNLFGDTNSLDVKLSD DGQFELDDLVSGDTVTNVLNLAHFDTKKLIQSYEKQLIKSELPKEKALSYLNELRSIFSQLTYLDGNIAQ >Mature_630_residues MNNNTLSDDNLYNIENWGEGYFRINSKGNIEISKKPGKPGVELQTIVDAADRAGLHLPLLIRCSDILHDRVHRIYQAFTQ AREDTYYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLEAGSKPELMAVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQ MGHKVFIVIEKKSELDIILKESARLQIKPTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQL MHCHLGSQIANIHDIRHCMQEVARYYIELRQLNAPIGTIDVGGGLSVDYEGTRSNKGCSMNYSLVEYATHIMLALKHLCQ EAEIPEPDLISESGRALTAHHAVLISNITDVEIINKAPVLPEISEDDSHVIRDIYDTYQAITDSSPTEIYNYAAHSLNEA HSLFKHGVISLQEKAKVEAFYTNICMEIKDKLDEENPSEKALLMRINECMAAKIFCNISFFQSIPDAWAIGQIFPVAPIS QLNRTLSMHSILQDLTCDSDGTIKQYPGSSCVTTTLMLPSYDINNPYNIGFFLVGAYQEILGNLHNLFGDTNSLDVKLSD DGQFELDDLVSGDTVTNVLNLAHFDTKKLIQSYEKQLIKSELPKEKALSYLNELRSIFSQLTYLDGNIAQ
Specific function: Catalyzes the biosynthesis of agmatine from arginine [H]
COG id: COG1166
COG function: function code E; Arginine decarboxylase (spermidine biosynthesis)
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789307, Length=620, Percent_Identity=45.6451612903226, Blast_Score=549, Evalue=1e-157,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009006 - InterPro: IPR002985 - InterPro: IPR022643 - InterPro: IPR022644 - InterPro: IPR022653 - InterPro: IPR000183 [H]
Pfam domain/function: PF02784 Orn_Arg_deC_N; PF00278 Orn_DAP_Arg_deC [H]
EC number: =4.1.1.19 [H]
Molecular weight: Translated: 70494; Mature: 70494
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNTLSDDNLYNIENWGEGYFRINSKGNIEISKKPGKPGVELQTIVDAADRAGLHLPLL CCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCHH IRCSDILHDRVHRIYQAFTQAREDTYYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLE HHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCCC AGSKPELMAVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQMGHKVFIVIEKKSELDIILK CCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEE ESARLQIKPTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQL CCCCEEEEECCCEEEEEEECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHH MHCHLGSQIANIHDIRHCMQEVARYYIELRQLNAPIGTIDVGGGLSVDYEGTRSNKGCSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCCCCCCCC NYSLVEYATHIMLALKHLCQEAEIPEPDLISESGRALTAHHAVLISNITDVEIINKAPVL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHEEEECCCCCEEEECCCCCC PEISEDDSHVIRDIYDTYQAITDSSPTEIYNYAAHSLNEAHSLFKHGVISLQEKAKVEAF CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH YTNICMEIKDKLDEENPSEKALLMRINECMAAKIFCNISFFQSIPDAWAIGQIFPVAPIS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHCCCHHHHCCCCCCCCHH QLNRTLSMHSILQDLTCDSDGTIKQYPGSSCVTTTLMLPSYDINNPYNIGFFLVGAYQEI HHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCEEHEEEEHHHHHH LGNLHNLFGDTNSLDVKLSDDGQFELDDLVSGDTVTNVLNLAHFDTKKLIQSYEKQLIKS HHHHHHHCCCCCCEEEEECCCCCEEHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH ELPKEKALSYLNELRSIFSQLTYLDGNIAQ HCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNNNTLSDDNLYNIENWGEGYFRINSKGNIEISKKPGKPGVELQTIVDAADRAGLHLPLL CCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCHH IRCSDILHDRVHRIYQAFTQAREDTYYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLE HHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCCC AGSKPELMAVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQMGHKVFIVIEKKSELDIILK CCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEE ESARLQIKPTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQL CCCCEEEEECCCEEEEEEECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHH MHCHLGSQIANIHDIRHCMQEVARYYIELRQLNAPIGTIDVGGGLSVDYEGTRSNKGCSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCCCCCCCC NYSLVEYATHIMLALKHLCQEAEIPEPDLISESGRALTAHHAVLISNITDVEIINKAPVL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHEEEECCCCCEEEECCCCCC PEISEDDSHVIRDIYDTYQAITDSSPTEIYNYAAHSLNEAHSLFKHGVISLQEKAKVEAF CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH YTNICMEIKDKLDEENPSEKALLMRINECMAAKIFCNISFFQSIPDAWAIGQIFPVAPIS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHCCCHHHHCCCCCCCCHH QLNRTLSMHSILQDLTCDSDGTIKQYPGSSCVTTTLMLPSYDINNPYNIGFFLVGAYQEI HHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCEEHEEEEHHHHHH LGNLHNLFGDTNSLDVKLSDDGQFELDDLVSGDTVTNVLNLAHFDTKKLIQSYEKQLIKS HHHHHHHCCCCCCEEEEECCCCCEEHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH ELPKEKALSYLNELRSIFSQLTYLDGNIAQ HCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA