| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148285177
Identifier: 148285177
GI number: 148285177
Start: 2122474
End: 2122896
Strand: Direct
Name: 148285177
Synonym: OTBS_2175
Alternate gene names: NA
Gene position: 2122474-2122896 (Clockwise)
Preceding gene: 148285175
Following gene: NA
Centisome position: 99.78
GC content: 24.82
Gene sequence:
>423_bases ATGACCTACATATCTGAAATATATCTACTATTAGCAAGTAATATTTTTGCCTCTAATTTTATTTTTAGCATTGAATCAGA ATATGTTTTTAGTGCCATGAGACATTTTGGCAACTATCAATTACATTTAGTAGTAATATCTATTATAGCTTCATTGTTTT GTGTTGGTAGCATAAATTATTTTTTAGGCGAACTATGCTATAAAATATATCTTTACTATCAAAATCCTAATCTAATTGCA AGATATAATAAATTATTTACAAGATTTAATGAGCATTGGAAACTAATAATATTATTAACTCTTGCTCCAATAATAGGAAA CACAATAATTTTTATAGCTGGTTTTCTACATAACTCTTATGCTAAAAATATTAGCGCATTTATAACAATAAAAACGCTCT ATTATTTGTTACCAATATTCTAG
Upstream 100 bases:
>100_bases AAAACTAGAAATATTTTTATAATCGAAAGTAAGAATAATTATTTTATCATTTTAATATATAAGTGTATAATGATTTAAAA ATATATCTGCATCGTTATCA
Downstream 100 bases:
>100_bases TTATCTAACCTAGGATCAATATAAGTGGTAGATAAAATATAGAGAAGAGATATAGTATTACAGACCTGTAATGTTTTCTA TAATGAACATTGCATGTTTC
Product: hypotheticaal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTYISEIYLLLASNIFASNFIFSIESEYVFSAMRHFGNYQLHLVVISIIASLFCVGSINYFLGELCYKIYLYYQNPNLIA RYNKLFTRFNEHWKLIILLTLAPIIGNTIIFIAGFLHNSYAKNISAFITIKTLYYLLPIF
Sequences:
>Translated_140_residues MTYISEIYLLLASNIFASNFIFSIESEYVFSAMRHFGNYQLHLVVISIIASLFCVGSINYFLGELCYKIYLYYQNPNLIA RYNKLFTRFNEHWKLIILLTLAPIIGNTIIFIAGFLHNSYAKNISAFITIKTLYYLLPIF >Mature_139_residues TYISEIYLLLASNIFASNFIFSIESEYVFSAMRHFGNYQLHLVVISIIASLFCVGSINYFLGELCYKIYLYYQNPNLIAR YNKLFTRFNEHWKLIILLTLAPIIGNTIIFIAGFLHNSYAKNISAFITIKTLYYLLPIF
Specific function: Unknown
COG id: COG1238
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16340; Mature: 16208
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYISEIYLLLASNIFASNFIFSIESEYVFSAMRHFGNYQLHLVVISIIASLFCVGSINY CCHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FLGELCYKIYLYYQNPNLIARYNKLFTRFNEHWKLIILLTLAPIIGNTIIFIAGFLHNSY HHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH AKNISAFITIKTLYYLLPIF HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TYISEIYLLLASNIFASNFIFSIESEYVFSAMRHFGNYQLHLVVISIIASLFCVGSINY CHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FLGELCYKIYLYYQNPNLIARYNKLFTRFNEHWKLIILLTLAPIIGNTIIFIAGFLHNSY HHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH AKNISAFITIKTLYYLLPIF HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA