| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is rhp4
Identifier: 148285136
GI number: 148285136
Start: 2032135
End: 2032665
Strand: Direct
Name: rhp4
Synonym: OTBS_2098
Alternate gene names: NA
Gene position: 2032135-2032665 (Clockwise)
Preceding gene: 148285134
Following gene: 148285138
Centisome position: 95.54
GC content: 27.5
Gene sequence:
>531_bases GTGATTATGTATAGAAGATATTTTGAACAGTTATCAGACCTTGGAAAGAAAACAATCGATTTTTTATTCAAGACAGAAAA AACAAATAAGTCTTTAATTGTTATTGGAGAAACTGATGACCAAAATTTTAATATTACTCAGGTAGCTCGTTTTTATGAAA GTAAAGGTAATGGACAAGTTAATGATCATCATTTTAGTAATAGAATATATTCAGTAGAATATGTAAATTATGATCATCCA AGGTCATATAATACGGTGTATTTAGTAAAAGATTTTAGTCATAATCATAAGGATGAACTTACATCTGAGATGGCTGCACA TCAGAATAAATCTCTTGGCATGATTAAAAAGACAGAGTTAGAACGTGCTAAAGTTTTAATTATTGTATCTAATGATTTAA ATGAGGATGCCAAAAATGAATTACAAGAGTTTGCTGAAGATCAAAAACTAAACAATTATTATGAACAAACTCACATTTTA AATCTTGATCAATTTGAAGAGTTTTTATCAGGTGATTTAGGTGTTGAATAA
Upstream 100 bases:
>100_bases TCAATGTACAGAAGAGGTTAGAAAAAATATTAGTTAAGGATAATTCTTGAAAATATAGATAGTATAAAGTATAATAATAT GACTTAATCTTAAATGAGAG
Downstream 100 bases:
>100_bases TCAATTATAGCGCTATATGGAAGTCATGTTTTGACTTCCTACTTTTTTTAAACCTCAGCAAAGCAAAATTATAATTTCAT CAGCAAAAGTATCAGCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MIMYRRYFEQLSDLGKKTIDFLFKTEKTNKSLIVIGETDDQNFNITQVARFYESKGNGQVNDHHFSNRIYSVEYVNYDHP RSYNTVYLVKDFSHNHKDELTSEMAAHQNKSLGMIKKTELERAKVLIIVSNDLNEDAKNELQEFAEDQKLNNYYEQTHIL NLDQFEEFLSGDLGVE
Sequences:
>Translated_176_residues MIMYRRYFEQLSDLGKKTIDFLFKTEKTNKSLIVIGETDDQNFNITQVARFYESKGNGQVNDHHFSNRIYSVEYVNYDHP RSYNTVYLVKDFSHNHKDELTSEMAAHQNKSLGMIKKTELERAKVLIIVSNDLNEDAKNELQEFAEDQKLNNYYEQTHIL NLDQFEEFLSGDLGVE >Mature_176_residues MIMYRRYFEQLSDLGKKTIDFLFKTEKTNKSLIVIGETDDQNFNITQVARFYESKGNGQVNDHHFSNRIYSVEYVNYDHP RSYNTVYLVKDFSHNHKDELTSEMAAHQNKSLGMIKKTELERAKVLIIVSNDLNEDAKNELQEFAEDQKLNNYYEQTHIL NLDQFEEFLSGDLGVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20732; Mature: 20732
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMYRRYFEQLSDLGKKTIDFLFKTEKTNKSLIVIGETDDQNFNITQVARFYESKGNGQV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCC NDHHFSNRIYSVEYVNYDHPRSYNTVYLVKDFSHNHKDELTSEMAAHQNKSLGMIKKTEL CCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHCCC ERAKVLIIVSNDLNEDAKNELQEFAEDQKLNNYYEQTHILNLDQFEEFLSGDLGVE CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MIMYRRYFEQLSDLGKKTIDFLFKTEKTNKSLIVIGETDDQNFNITQVARFYESKGNGQV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCC NDHHFSNRIYSVEYVNYDHPRSYNTVYLVKDFSHNHKDELTSEMAAHQNKSLGMIKKTEL CCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHCCC ERAKVLIIVSNDLNEDAKNELQEFAEDQKLNNYYEQTHILNLDQFEEFLSGDLGVE CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA