Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is rhp6

Identifier: 148285134

GI number: 148285134

Start: 2030581

End: 2030841

Strand: Direct

Name: rhp6

Synonym: OTBS_2095

Alternate gene names: NA

Gene position: 2030581-2030841 (Clockwise)

Preceding gene: 148285132

Following gene: 148285136

Centisome position: 95.46

GC content: 31.42

Gene sequence:

>261_bases
ATGACTAATATCCTTAAAGCATATAATTTTGTCCAAGGAAATTATTATTATAATATAATTGCTGGTAATATAGGATCAAT
TTTTGCTACAGGTGGCATAATGTCAGTTTTCAAGGAAGGTATTAGAGGAGAGTTGGGAGTTGGCATTGCAGTAGACTTAT
ATGGTATATATTATACAGACATTGAATTTGGTGGCACCTATAATAATAGCGATAATTCACTTCCTTTTTATATACGTTCT
GGATTTCGTTTGCATTGTTGA

Upstream 100 bases:

>100_bases
TATCACATAATCATAATTGTACATTATGTCTTATAAACCTTTTTCATTATGCTTTTCATGCTTCCACTTATCCTAATCTG
GCGTTATAAGGCTAGGGTTT

Downstream 100 bases:

>100_bases
ATGAAATGAGTTCAGTAGTTAGTAATGATTAGCTCATTAACGAAATTTCGCTGTTCATTGATTGAGTATGTGACTGGAAT
ATGAGTGATGAAAAAGTCTT

Product: putative ompA-like autotransporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MTNILKAYNFVQGNYYYNIIAGNIGSIFATGGIMSVFKEGIRGELGVGIAVDLYGIYYTDIEFGGTYNNSDNSLPFYIRS
GFRLHC

Sequences:

>Translated_86_residues
MTNILKAYNFVQGNYYYNIIAGNIGSIFATGGIMSVFKEGIRGELGVGIAVDLYGIYYTDIEFGGTYNNSDNSLPFYIRS
GFRLHC
>Mature_85_residues
TNILKAYNFVQGNYYYNIIAGNIGSIFATGGIMSVFKEGIRGELGVGIAVDLYGIYYTDIEFGGTYNNSDNSLPFYIRSG
FRLHC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9541; Mature: 9410

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNILKAYNFVQGNYYYNIIAGNIGSIFATGGIMSVFKEGIRGELGVGIAVDLYGIYYTD
CCCCHHHEEEECCCEEEEEEECCCCCEEECCCHHHHHHHCCCCCCCCEEEEEEEEEEEEE
IEFGGTYNNSDNSLPFYIRSGFRLHC
EEECCCCCCCCCCCEEEEECCEEECC
>Mature Secondary Structure 
TNILKAYNFVQGNYYYNIIAGNIGSIFATGGIMSVFKEGIRGELGVGIAVDLYGIYYTD
CCCHHHEEEECCCEEEEEEECCCCCEEECCCHHHHHHHCCCCCCCCEEEEEEEEEEEEE
IEFGGTYNNSDNSLPFYIRSGFRLHC
EEECCCCCCCCCCCEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA