| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
Click here to switch to the map view.
The map label for this gene is hkp42
Identifier: 148285110
GI number: 148285110
Start: 1985015
End: 1985842
Strand: Direct
Name: hkp42
Synonym: OTBS_2053
Alternate gene names: NA
Gene position: 1985015-1985842 (Clockwise)
Preceding gene: 148285109
Following gene: 148285111
Centisome position: 93.32
GC content: 28.74
Gene sequence:
>828_bases ATGCCTATAGAATACGAAGGTCAAAATAAAATCAATAAATTAACTGAAAAATTATCTACAGAAGGAATTAATAGCACAAC AATAAAACAGATAGATTCTGAAATGCAAAAACTATACTGCCAGCTAGAGGAATCTGAGCAAGTAAGCATAAATTGCATAG AGTGGATACAATATTTTAGGCTAATAGTAAATAACTACGACAGAAAAAAAGTAAATATAATAACTTCTCTAAATGGAATG ATTTTTTTATTTAGACAATACATAGCATCAACAAATGTAAGGATTGAAACATTTAACATAGAATTGCTAATAAATAATAC CGTTATCAGAATGAGGAAACATTTTGAAAATGAGAATATAAAGCTAAATGTTCAAAATGACATAAAGACGGTTCTGATTG GAGATAGTTTTAGAATAAAAGCAGTAATAAGTCAGTTAATTGGTAGTGCTATTATAAATAGTAGTAAGCATAGCAAGATT ACTATTAACATCAATCAGTATTCAGAAATATTACAATTTACAGTACAAAACATAGTACTAAGCCCTTCTAAAGAAAAATT AGAAAGAATAAATTCCGAACTAGAGAATTTGAATTTGGTAACATATCAAGAACTAGGAGAAGGATTAGCATTTATTAAAC ATCTTATACATCAGCTAAAAGGAAGGCTAAGAGCAAAAGAGGAAAATAATTACATAACTTTTGCATTTGAAGTGCCAATA ACTAGTTTTAACTCTTCTTTTGGCGAATGTTATGAAAAACCAATGGATGGTACAAATTCCTCCAATACCAATTACGCTAG TGAATGGAGAAAGGGAGAATATCGATGA
Upstream 100 bases:
>100_bases GATAATATTCCGATAGAGATTAAAAGCATATAAACAACTAAATTTATCTTTTTAATCTCTAGCATAACAGTTTTAACACT TAAAACAGCAGGGTAATTCT
Downstream 100 bases:
>100_bases ATATATGGAGATAATAACAAAGTTAAGAAAAGCGAAGTATCAGGTCGAGGTAGCTGAATCATTGAAAGAATATTGTGTGA ATCTGATACAGAATATCAAA
Product: putative signal transduction histidine kinase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MPIEYEGQNKINKLTEKLSTEGINSTTIKQIDSEMQKLYCQLEESEQVSINCIEWIQYFRLIVNNYDRKKVNIITSLNGM IFLFRQYIASTNVRIETFNIELLINNTVIRMRKHFENENIKLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKHSKI TININQYSEILQFTVQNIVLSPSKEKLERINSELENLNLVTYQELGEGLAFIKHLIHQLKGRLRAKEENNYITFAFEVPI TSFNSSFGECYEKPMDGTNSSNTNYASEWRKGEYR
Sequences:
>Translated_275_residues MPIEYEGQNKINKLTEKLSTEGINSTTIKQIDSEMQKLYCQLEESEQVSINCIEWIQYFRLIVNNYDRKKVNIITSLNGM IFLFRQYIASTNVRIETFNIELLINNTVIRMRKHFENENIKLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKHSKI TININQYSEILQFTVQNIVLSPSKEKLERINSELENLNLVTYQELGEGLAFIKHLIHQLKGRLRAKEENNYITFAFEVPI TSFNSSFGECYEKPMDGTNSSNTNYASEWRKGEYR >Mature_274_residues PIEYEGQNKINKLTEKLSTEGINSTTIKQIDSEMQKLYCQLEESEQVSINCIEWIQYFRLIVNNYDRKKVNIITSLNGMI FLFRQYIASTNVRIETFNIELLINNTVIRMRKHFENENIKLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKHSKIT ININQYSEILQFTVQNIVLSPSKEKLERINSELENLNLVTYQELGEGLAFIKHLIHQLKGRLRAKEENNYITFAFEVPIT SFNSSFGECYEKPMDGTNSSNTNYASEWRKGEYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31955; Mature: 31824
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIEYEGQNKINKLTEKLSTEGINSTTIKQIDSEMQKLYCQLEESEQVSINCIEWIQYFR CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH LIVNNYDRKKVNIITSLNGMIFLFRQYIASTNVRIETFNIELLINNTVIRMRKHFENENI HHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHCCCCCE KLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKHSKITININQYSEILQFTVQNIVL EEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHC SPSKEKLERINSELENLNLVTYQELGEGLAFIKHLIHQLKGRLRAKEENNYITFAFEVPI CCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC TSFNSSFGECYEKPMDGTNSSNTNYASEWRKGEYR CCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC >Mature Secondary Structure PIEYEGQNKINKLTEKLSTEGINSTTIKQIDSEMQKLYCQLEESEQVSINCIEWIQYFR CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH LIVNNYDRKKVNIITSLNGMIFLFRQYIASTNVRIETFNIELLINNTVIRMRKHFENENI HHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHCCCCCE KLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKHSKITININQYSEILQFTVQNIVL EEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHC SPSKEKLERINSELENLNLVTYQELGEGLAFIKHLIHQLKGRLRAKEENNYITFAFEVPI CCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC TSFNSSFGECYEKPMDGTNSSNTNYASEWRKGEYR CCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA