| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148285109
Identifier: 148285109
GI number: 148285109
Start: 1983421
End: 1984470
Strand: Direct
Name: 148285109
Synonym: OTBS_2052
Alternate gene names: NA
Gene position: 1983421-1984470 (Clockwise)
Preceding gene: 148285108
Following gene: 148285110
Centisome position: 93.25
GC content: 29.24
Gene sequence:
>1050_bases ATGAAGGATACTGTTATGTATAGGCAAATATTAAATAATATACATAAAAGGCAGTTTAATAGTGATTTTGCTCTTGCTGG TGGAAGATATAAGAATACATCTAGGACTGAAGAACAAAAAGCTTTCGATTCCTTAGCTAAGATTCTAGCGGTTTATAACA AGAAGGTATGCGTAGCCATAGCTGTAGCAGGGACTTTTTTTGACAAAAGATATTATGTTACTTATAACGCTAATACTGGC AGTGAAAGTGAATGTGATAAATTTTTACTGAATACTAAAAAAATAATTACGTCGTGTATAAATAATCAAGAAGATAGCCT ATCAGATGAATTAGTTAAATCAGTTCTCAATGATAACAAATTAAAAAACAAACTTGTGAATTCTGTATTTAAGCTTAATA CTGGATATATTGGACAATCTAAACAGCTTATATTTGGCATCATGAGAAATGTAGAAACGCATTACAAGCAAGCTAAGCTT GCTACAACAACAGTAGATGATCGACATGAGCATTATAATTTTCTTTGTGAAGCATATAGTCAGATAAAAGATTTTCTCAA TAGTAATGAAGTTTTAGGTAAAAATTATCGTTTAATTAATCAAGTTAAATCATCACTGTCAGAATTTTATAAAATAAACC TTAATATAAAAAGGGTATGCAGCTATTTTAAAGACAATGGTGATTTCATTAAAAATTTAATAATAATTCAGAATCACTCT ACTCCTAATAATCAAATACACGCTGAAATGATTTTGTTAGAACATATCCACAGTGATTATCATGAATCATATAATAGCGA AGCATATATTGGAATATCAAAATTATCTTGTATGCCTTGTAGTAAAGTTATTAAGCTTTATAATGAGAGTGCAAATAATC TTGATGTTCAATACCATGGTACACATGGGAAAGTGTATGAAAACTGGAATTATCCAAACAAAATATGTTCCATTGTATCA GAAGAGAACTTTGTTAGTGAATTAGAAAATTGCGAATCATTATTTCTCCCACTAGGAAGAGATGATGCTACTACTAGTGA TTCTAACTAA
Upstream 100 bases:
>100_bases AACGCTATATCAGAAGACTTACCTGTAGATTATTTTATGCAGAAACTATATATATCAGTTGAAGAAGATGCATATCTTCT AGGGCAAAATACCACTAATA
Downstream 100 bases:
>100_bases TTAGAAGAATAGCAAAAACAAGATTTGCAATAAACTATTATTTGCTTTAGGAGTTAGCTAAGAATAAGGGAAAAAAACTG ATAATAATCACCGTTTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKDTVMYRQILNNIHKRQFNSDFALAGGRYKNTSRTEEQKAFDSLAKILAVYNKKVCVAIAVAGTFFDKRYYVTYNANTG SESECDKFLLNTKKIITSCINNQEDSLSDELVKSVLNDNKLKNKLVNSVFKLNTGYIGQSKQLIFGIMRNVETHYKQAKL ATTTVDDRHEHYNFLCEAYSQIKDFLNSNEVLGKNYRLINQVKSSLSEFYKINLNIKRVCSYFKDNGDFIKNLIIIQNHS TPNNQIHAEMILLEHIHSDYHESYNSEAYIGISKLSCMPCSKVIKLYNESANNLDVQYHGTHGKVYENWNYPNKICSIVS EENFVSELENCESLFLPLGRDDATTSDSN
Sequences:
>Translated_349_residues MKDTVMYRQILNNIHKRQFNSDFALAGGRYKNTSRTEEQKAFDSLAKILAVYNKKVCVAIAVAGTFFDKRYYVTYNANTG SESECDKFLLNTKKIITSCINNQEDSLSDELVKSVLNDNKLKNKLVNSVFKLNTGYIGQSKQLIFGIMRNVETHYKQAKL ATTTVDDRHEHYNFLCEAYSQIKDFLNSNEVLGKNYRLINQVKSSLSEFYKINLNIKRVCSYFKDNGDFIKNLIIIQNHS TPNNQIHAEMILLEHIHSDYHESYNSEAYIGISKLSCMPCSKVIKLYNESANNLDVQYHGTHGKVYENWNYPNKICSIVS EENFVSELENCESLFLPLGRDDATTSDSN >Mature_349_residues MKDTVMYRQILNNIHKRQFNSDFALAGGRYKNTSRTEEQKAFDSLAKILAVYNKKVCVAIAVAGTFFDKRYYVTYNANTG SESECDKFLLNTKKIITSCINNQEDSLSDELVKSVLNDNKLKNKLVNSVFKLNTGYIGQSKQLIFGIMRNVETHYKQAKL ATTTVDDRHEHYNFLCEAYSQIKDFLNSNEVLGKNYRLINQVKSSLSEFYKINLNIKRVCSYFKDNGDFIKNLIIIQNHS TPNNQIHAEMILLEHIHSDYHESYNSEAYIGISKLSCMPCSKVIKLYNESANNLDVQYHGTHGKVYENWNYPNKICSIVS EENFVSELENCESLFLPLGRDDATTSDSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40095; Mature: 40095
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDTVMYRQILNNIHKRQFNSDFALAGGRYKNTSRTEEQKAFDSLAKILAVYNKKVCVAI CCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE AVAGTFFDKRYYVTYNANTGSESECDKFLLNTKKIITSCINNQEDSLSDELVKSVLNDNK EEHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH LKNKLVNSVFKLNTGYIGQSKQLIFGIMRNVETHYKQAKLATTTVDDRHEHYNFLCEAYS HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QIKDFLNSNEVLGKNYRLINQVKSSLSEFYKINLNIKRVCSYFKDNGDFIKNLIIIQNHS HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCHHEEEEEEEECCC TPNNQIHAEMILLEHIHSDYHESYNSEAYIGISKLSCMPCSKVIKLYNESANNLDVQYHG CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCHHHHHHHHHCCCCCEEEEEEC THGKVYENWNYPNKICSIVSEENFVSELENCESLFLPLGRDDATTSDSN CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKDTVMYRQILNNIHKRQFNSDFALAGGRYKNTSRTEEQKAFDSLAKILAVYNKKVCVAI CCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE AVAGTFFDKRYYVTYNANTGSESECDKFLLNTKKIITSCINNQEDSLSDELVKSVLNDNK EEHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH LKNKLVNSVFKLNTGYIGQSKQLIFGIMRNVETHYKQAKLATTTVDDRHEHYNFLCEAYS HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QIKDFLNSNEVLGKNYRLINQVKSSLSEFYKINLNIKRVCSYFKDNGDFIKNLIIIQNHS HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCHHEEEEEEEECCC TPNNQIHAEMILLEHIHSDYHESYNSEAYIGISKLSCMPCSKVIKLYNESANNLDVQYHG CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCHHHHHHHHHCCCCCEEEEEEC THGKVYENWNYPNKICSIVSEENFVSELENCESLFLPLGRDDATTSDSN CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA