| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is p34 [H]
Identifier: 148284932
GI number: 148284932
Start: 1667484
End: 1668401
Strand: Direct
Name: p34 [H]
Synonym: OTBS_1715
Alternate gene names: 148284932
Gene position: 1667484-1668401 (Clockwise)
Preceding gene: 148284930
Following gene: 148284933
Centisome position: 78.39
GC content: 28.87
Gene sequence:
>918_bases ATGAAACATAAAGCAGTTCCTACTTATCTTCAACACTCAAAACTAATAAAAAGCGCAATTCTGCTATCTATTGCAACTGC AAGTGTCATTTTAACAATTAAAATATATGGTTGGATTACTACTAGTTCTGTAGCATTATTTGCATCTTTACTAGATTCTA TGTTAGATATTTCTTCGTCATTAATAAATATGGTAGCAGTTCGTATAATGCTCTTACCTCCTGATGATAATCACCGTTTT GGTCATAATAAAGTACAAGACTTAGCTATTTTTTCTCAATCTATATTCTTTTTTTGTTCTGCTATTTTTACTTTATTTTC AGCTATTAACAAACTATTTAATTTTCATGAAGTGAGTCATCATAATGTTGGCATTAATGTTATGATTGTATCATCTGTTT GCATATTTATGCTAGTTTGTTATCAGAACTATGTGTATAAGAAAACTCAGTCTTATATTGTAGCAGTTGATAAATTGCAT AATTTTGTTGATTTATTAACTAACTTATCAGTTATTATATCATTAAAAGTTAGTGTAAATTTTTGGTTTATTGATTTAGT ATTTGCTATTCTGATTAGCGTATATTTACTATATGGGTGTATCAAACTGTTTAGAAAAGCGCTTAAAAATCTTCTTGATC AAGAATTTGATAAAACAGAAAAGCAAAAAATTTTGAATATTATTCGTCAAAATACACAAGTTTTAGGGGTACATGAGCTT AAGACTAGATATGCTGGTAATAAGCCATTTATACAATGTCACTTAGAGGTTGATGGAAATATGACTTTACTTCAGGCTCA TGAAATTGCTGACGATATTAGTGCTAAAATTGAAGAAGAGTTTCCTGGTTGCGAAGTATTAATTCATCAAGATCCTGCTG GCTATGAACAGTGTGTAATGTATCAAGAGAAAATTTGA
Upstream 100 bases:
>100_bases AGTACATAAAGATTATTATATTCCACTGTTGACTAATTTACGCTACATACTACTATAAATAGTACATATTAATGACACTA AAATTAAATACATTCAAAAT
Downstream 100 bases:
>100_bases TATATATGTGACTCTTTAATTATTTATTAGGGAAAAATATTATCATATTATAGCTATGTTTATGTTACAAGCAATAGAGC AGGCTTCACAGGCTTTTAAC
Product: p34 protein/ cation transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKHKAVPTYLQHSKLIKSAILLSIATASVILTIKIYGWITTSSVALFASLLDSMLDISSSLINMVAVRIMLLPPDDNHRF GHNKVQDLAIFSQSIFFFCSAIFTLFSAINKLFNFHEVSHHNVGINVMIVSSVCIFMLVCYQNYVYKKTQSYIVAVDKLH NFVDLLTNLSVIISLKVSVNFWFIDLVFAILISVYLLYGCIKLFRKALKNLLDQEFDKTEKQKILNIIRQNTQVLGVHEL KTRYAGNKPFIQCHLEVDGNMTLLQAHEIADDISAKIEEEFPGCEVLIHQDPAGYEQCVMYQEKI
Sequences:
>Translated_305_residues MKHKAVPTYLQHSKLIKSAILLSIATASVILTIKIYGWITTSSVALFASLLDSMLDISSSLINMVAVRIMLLPPDDNHRF GHNKVQDLAIFSQSIFFFCSAIFTLFSAINKLFNFHEVSHHNVGINVMIVSSVCIFMLVCYQNYVYKKTQSYIVAVDKLH NFVDLLTNLSVIISLKVSVNFWFIDLVFAILISVYLLYGCIKLFRKALKNLLDQEFDKTEKQKILNIIRQNTQVLGVHEL KTRYAGNKPFIQCHLEVDGNMTLLQAHEIADDISAKIEEEFPGCEVLIHQDPAGYEQCVMYQEKI >Mature_305_residues MKHKAVPTYLQHSKLIKSAILLSIATASVILTIKIYGWITTSSVALFASLLDSMLDISSSLINMVAVRIMLLPPDDNHRF GHNKVQDLAIFSQSIFFFCSAIFTLFSAINKLFNFHEVSHHNVGINVMIVSSVCIFMLVCYQNYVYKKTQSYIVAVDKLH NFVDLLTNLSVIISLKVSVNFWFIDLVFAILISVYLLYGCIKLFRKALKNLLDQEFDKTEKQKILNIIRQNTQVLGVHEL KTRYAGNKPFIQCHLEVDGNMTLLQAHEIADDISAKIEEEFPGCEVLIHQDPAGYEQCVMYQEKI
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=282, Percent_Identity=39.0070921985816, Blast_Score=224, Evalue=4e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 34716; Mature: 34716
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHKAVPTYLQHSKLIKSAILLSIATASVILTIKIYGWITTSSVALFASLLDSMLDISSS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHH LINMVAVRIMLLPPDDNHRFGHNKVQDLAIFSQSIFFFCSAIFTLFSAINKLFNFHEVSH HHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HNVGINVMIVSSVCIFMLVCYQNYVYKKTQSYIVAVDKLHNFVDLLTNLSVIISLKVSVN CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEEEEH FWFIDLVFAILISVYLLYGCIKLFRKALKNLLDQEFDKTEKQKILNIIRQNTQVLGVHEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEHHHH KTRYAGNKPFIQCHLEVDGNMTLLQAHEIADDISAKIEEEFPGCEVLIHQDPAGYEQCVM HHHHCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH YQEKI HHHCC >Mature Secondary Structure MKHKAVPTYLQHSKLIKSAILLSIATASVILTIKIYGWITTSSVALFASLLDSMLDISSS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHH LINMVAVRIMLLPPDDNHRFGHNKVQDLAIFSQSIFFFCSAIFTLFSAINKLFNFHEVSH HHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HNVGINVMIVSSVCIFMLVCYQNYVYKKTQSYIVAVDKLHNFVDLLTNLSVIISLKVSVN CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEEEEH FWFIDLVFAILISVYLLYGCIKLFRKALKNLLDQEFDKTEKQKILNIIRQNTQVLGVHEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEHHHH KTRYAGNKPFIQCHLEVDGNMTLLQAHEIADDISAKIEEEFPGCEVLIHQDPAGYEQCVM HHHHCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH YQEKI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2124682 [H]