Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is p34 [H]

Identifier: 148284932

GI number: 148284932

Start: 1667484

End: 1668401

Strand: Direct

Name: p34 [H]

Synonym: OTBS_1715

Alternate gene names: 148284932

Gene position: 1667484-1668401 (Clockwise)

Preceding gene: 148284930

Following gene: 148284933

Centisome position: 78.39

GC content: 28.87

Gene sequence:

>918_bases
ATGAAACATAAAGCAGTTCCTACTTATCTTCAACACTCAAAACTAATAAAAAGCGCAATTCTGCTATCTATTGCAACTGC
AAGTGTCATTTTAACAATTAAAATATATGGTTGGATTACTACTAGTTCTGTAGCATTATTTGCATCTTTACTAGATTCTA
TGTTAGATATTTCTTCGTCATTAATAAATATGGTAGCAGTTCGTATAATGCTCTTACCTCCTGATGATAATCACCGTTTT
GGTCATAATAAAGTACAAGACTTAGCTATTTTTTCTCAATCTATATTCTTTTTTTGTTCTGCTATTTTTACTTTATTTTC
AGCTATTAACAAACTATTTAATTTTCATGAAGTGAGTCATCATAATGTTGGCATTAATGTTATGATTGTATCATCTGTTT
GCATATTTATGCTAGTTTGTTATCAGAACTATGTGTATAAGAAAACTCAGTCTTATATTGTAGCAGTTGATAAATTGCAT
AATTTTGTTGATTTATTAACTAACTTATCAGTTATTATATCATTAAAAGTTAGTGTAAATTTTTGGTTTATTGATTTAGT
ATTTGCTATTCTGATTAGCGTATATTTACTATATGGGTGTATCAAACTGTTTAGAAAAGCGCTTAAAAATCTTCTTGATC
AAGAATTTGATAAAACAGAAAAGCAAAAAATTTTGAATATTATTCGTCAAAATACACAAGTTTTAGGGGTACATGAGCTT
AAGACTAGATATGCTGGTAATAAGCCATTTATACAATGTCACTTAGAGGTTGATGGAAATATGACTTTACTTCAGGCTCA
TGAAATTGCTGACGATATTAGTGCTAAAATTGAAGAAGAGTTTCCTGGTTGCGAAGTATTAATTCATCAAGATCCTGCTG
GCTATGAACAGTGTGTAATGTATCAAGAGAAAATTTGA

Upstream 100 bases:

>100_bases
AGTACATAAAGATTATTATATTCCACTGTTGACTAATTTACGCTACATACTACTATAAATAGTACATATTAATGACACTA
AAATTAAATACATTCAAAAT

Downstream 100 bases:

>100_bases
TATATATGTGACTCTTTAATTATTTATTAGGGAAAAATATTATCATATTATAGCTATGTTTATGTTACAAGCAATAGAGC
AGGCTTCACAGGCTTTTAAC

Product: p34 protein/ cation transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKHKAVPTYLQHSKLIKSAILLSIATASVILTIKIYGWITTSSVALFASLLDSMLDISSSLINMVAVRIMLLPPDDNHRF
GHNKVQDLAIFSQSIFFFCSAIFTLFSAINKLFNFHEVSHHNVGINVMIVSSVCIFMLVCYQNYVYKKTQSYIVAVDKLH
NFVDLLTNLSVIISLKVSVNFWFIDLVFAILISVYLLYGCIKLFRKALKNLLDQEFDKTEKQKILNIIRQNTQVLGVHEL
KTRYAGNKPFIQCHLEVDGNMTLLQAHEIADDISAKIEEEFPGCEVLIHQDPAGYEQCVMYQEKI

Sequences:

>Translated_305_residues
MKHKAVPTYLQHSKLIKSAILLSIATASVILTIKIYGWITTSSVALFASLLDSMLDISSSLINMVAVRIMLLPPDDNHRF
GHNKVQDLAIFSQSIFFFCSAIFTLFSAINKLFNFHEVSHHNVGINVMIVSSVCIFMLVCYQNYVYKKTQSYIVAVDKLH
NFVDLLTNLSVIISLKVSVNFWFIDLVFAILISVYLLYGCIKLFRKALKNLLDQEFDKTEKQKILNIIRQNTQVLGVHEL
KTRYAGNKPFIQCHLEVDGNMTLLQAHEIADDISAKIEEEFPGCEVLIHQDPAGYEQCVMYQEKI
>Mature_305_residues
MKHKAVPTYLQHSKLIKSAILLSIATASVILTIKIYGWITTSSVALFASLLDSMLDISSSLINMVAVRIMLLPPDDNHRF
GHNKVQDLAIFSQSIFFFCSAIFTLFSAINKLFNFHEVSHHNVGINVMIVSSVCIFMLVCYQNYVYKKTQSYIVAVDKLH
NFVDLLTNLSVIISLKVSVNFWFIDLVFAILISVYLLYGCIKLFRKALKNLLDQEFDKTEKQKILNIIRQNTQVLGVHEL
KTRYAGNKPFIQCHLEVDGNMTLLQAHEIADDISAKIEEEFPGCEVLIHQDPAGYEQCVMYQEKI

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=282, Percent_Identity=39.0070921985816, Blast_Score=224, Evalue=4e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 34716; Mature: 34716

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKAVPTYLQHSKLIKSAILLSIATASVILTIKIYGWITTSSVALFASLLDSMLDISSS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHH
LINMVAVRIMLLPPDDNHRFGHNKVQDLAIFSQSIFFFCSAIFTLFSAINKLFNFHEVSH
HHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HNVGINVMIVSSVCIFMLVCYQNYVYKKTQSYIVAVDKLHNFVDLLTNLSVIISLKVSVN
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEEEEH
FWFIDLVFAILISVYLLYGCIKLFRKALKNLLDQEFDKTEKQKILNIIRQNTQVLGVHEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEHHHH
KTRYAGNKPFIQCHLEVDGNMTLLQAHEIADDISAKIEEEFPGCEVLIHQDPAGYEQCVM
HHHHCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH
YQEKI
HHHCC
>Mature Secondary Structure
MKHKAVPTYLQHSKLIKSAILLSIATASVILTIKIYGWITTSSVALFASLLDSMLDISSS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHH
LINMVAVRIMLLPPDDNHRFGHNKVQDLAIFSQSIFFFCSAIFTLFSAINKLFNFHEVSH
HHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HNVGINVMIVSSVCIFMLVCYQNYVYKKTQSYIVAVDKLHNFVDLLTNLSVIISLKVSVN
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEEEEH
FWFIDLVFAILISVYLLYGCIKLFRKALKNLLDQEFDKTEKQKILNIIRQNTQVLGVHEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEHHHH
KTRYAGNKPFIQCHLEVDGNMTLLQAHEIADDISAKIEEEFPGCEVLIHQDPAGYEQCVM
HHHHCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH
YQEKI
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2124682 [H]