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The map label for this gene is codA [C]

Identifier: 148284933

GI number: 148284933

Start: 1668457

End: 1668924

Strand: Direct

Name: codA [C]

Synonym: OTBS_1716

Alternate gene names: 148284933

Gene position: 1668457-1668924 (Clockwise)

Preceding gene: 148284932

Following gene: 148284934

Centisome position: 78.44

GC content: 31.84

Gene sequence:

>468_bases
ATGTTTATGTTACAAGCAATAGAGCAGGCTTCACAGGCTTTTAACTTAGGTGAAGTACCTGTAGGAGTAGTTATAGTTAA
TCGAGCAACAAAAACTGTATTAACTAGAGCTTATAATAAAGTTGAAACTACATTAAATCCTACTTTTCATGCTGAAATTA
TTGCAATTAATAAAGCTTGCAGTTTGTTAAGCTGCAAATACTTACATGGTTATGATATTTATGTTAGCCTAGAACCATGC
GCAATGTGCGCTGCTGCGTTATCTCATGTTAGAATTGATCGTATATTTTTTGGAGCATATGATGAAAAGTTTGGTGCTAT
AGAAAACGGTGTACGGCTCTTTTATAATACAACGGTATATTATAAACCAGAAATATATGGTGGTATTATGGAGTTGCAAT
CTAAGGAATTATTACAAAAGTTTTTTAGTAATCTCAGAGTAAAGAATGAAACAAAGTGTATAATGTAA

Upstream 100 bases:

>100_bases
CCTGCTGGCTATGAACAGTGTGTAATGTATCAAGAGAAAATTTGATATATATGTGACTCTTTAATTATTTATTAGGGAAA
AATATTATCATATTATAGCT

Downstream 100 bases:

>100_bases
ATGTTAAAAATTGCAAAAATTGGAGTATTATAGTTTATAGTTTATAGTTTATAGTTTATTAAACATCATACATAAAAATG
AATAAGCTAGATATTAGCAC

Product: cytosine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MFMLQAIEQASQAFNLGEVPVGVVIVNRATKTVLTRAYNKVETTLNPTFHAEIIAINKACSLLSCKYLHGYDIYVSLEPC
AMCAAALSHVRIDRIFFGAYDEKFGAIENGVRLFYNTTVYYKPEIYGGIMELQSKELLQKFFSNLRVKNETKCIM

Sequences:

>Translated_155_residues
MFMLQAIEQASQAFNLGEVPVGVVIVNRATKTVLTRAYNKVETTLNPTFHAEIIAINKACSLLSCKYLHGYDIYVSLEPC
AMCAAALSHVRIDRIFFGAYDEKFGAIENGVRLFYNTTVYYKPEIYGGIMELQSKELLQKFFSNLRVKNETKCIM
>Mature_155_residues
MFMLQAIEQASQAFNLGEVPVGVVIVNRATKTVLTRAYNKVETTLNPTFHAEIIAINKACSLLSCKYLHGYDIYVSLEPC
AMCAAALSHVRIDRIFFGAYDEKFGAIENGVRLFYNTTVYYKPEIYGGIMELQSKELLQKFFSNLRVKNETKCIM

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=145, Percent_Identity=35.1724137931034, Blast_Score=94, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17541138, Length=154, Percent_Identity=33.7662337662338, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17555996, Length=115, Percent_Identity=33.0434782608696, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17554608, Length=115, Percent_Identity=35.6521739130435, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322425, Length=118, Percent_Identity=31.3559322033898, Blast_Score=65, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21355527, Length=151, Percent_Identity=31.7880794701987, Blast_Score=73, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 17538; Mature: 17538

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMLQAIEQASQAFNLGEVPVGVVIVNRATKTVLTRAYNKVETTLNPTFHAEIIAINKAC
CHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHH
SLLSCKYLHGYDIYVSLEPCAMCAAALSHVRIDRIFFGAYDEKFGAIENGVRLFYNTTVY
HHHEEHEECCEEEEEEECHHHHHHHHHHHHHHHHEEECCCCCCCCHHHCCEEEEEEEEEE
YKPEIYGGIMELQSKELLQKFFSNLRVKNETKCIM
ECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFMLQAIEQASQAFNLGEVPVGVVIVNRATKTVLTRAYNKVETTLNPTFHAEIIAINKAC
CHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHH
SLLSCKYLHGYDIYVSLEPCAMCAAALSHVRIDRIFFGAYDEKFGAIENGVRLFYNTTVY
HHHEEHEECCEEEEEEECHHHHHHHHHHHHHHHHEEECCCCCCCCHHHCCEEEEEEEEEE
YKPEIYGGIMELQSKELLQKFFSNLRVKNETKCIM
ECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA