| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284748
Identifier: 148284748
GI number: 148284748
Start: 1335617
End: 1336312
Strand: Direct
Name: 148284748
Synonym: OTBS_1372
Alternate gene names: NA
Gene position: 1335617-1336312 (Clockwise)
Preceding gene: 148284747
Following gene: 148284749
Centisome position: 62.79
GC content: 28.74
Gene sequence:
>696_bases ATGGAAGACTTTTTAAATATTACAGAAGCTAATATAGAAAAGCAGAATTTTTGCGTAGAAACTGATGAAATTTTTTATAA AGGTAGAGCTATGAATAACATTTGTCATAGCGTGTTTACTAGCACTACAAAAGAAATTAGCATAGAAAAAACTTTTTACT CTTATCGAGAATGTAAAAGAAGTTATAATGAACTGGACTGCAGTAATGCAACAAGCTTTCTAGGTGAAATTATAGAATAT AGTTCGAAGTTATGGATTCAATTTAAAAAAGATATACCTATTTTTTTTGAAAATATATGTAACCCAGGTGAAATCAAAGT TTGTATTGATGGCAGAGTACTAGATAACGATGCTGAACAAATCAACAATACAGATAATAGTGATTTATGGAAGATAAGTA TACCAACTGTAATTATTTTAACATTAACATTAGGAGTAGTAACATTTTTGATTAAAAAAAAGTATAGAAGCAGCAATACT ACAAATAAAAGTGATGCTGATGTTGAATCAGAAACGCCTTGCCTTGATAAATCTCATATAAAAGAAGCAACTAAGCAAGT TAGCAATGACTCTAATGATAATATCATTCCAGCTGTTGATAACATTCAAGTATGTAATACTTTGAATGCTGGTTTGGAAG CTCAAGAAGAACATACTATACAAGGAAAATTATCTTATTATGAGAGCGATATATAA
Upstream 100 bases:
>100_bases AACTTAAAAAATAATTTACTAATCATTGATTTTATCGTAATACTTGCAAGAAGTTTATAGTTTATAAAATACATTAATTA TAAAAGAAGGTAATTATTTT
Downstream 100 bases:
>100_bases CACAAGTTTGATATAATGAGAATATCAGCGAAGAGTGAGACACAGCTAAGATTTTAAAAATTATTATCTATATTAAGTGC GTTATAAACGCCAGATTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MEDFLNITEANIEKQNFCVETDEIFYKGRAMNNICHSVFTSTTKEISIEKTFYSYRECKRSYNELDCSNATSFLGEIIEY SSKLWIQFKKDIPIFFENICNPGEIKVCIDGRVLDNDAEQINNTDNSDLWKISIPTVIILTLTLGVVTFLIKKKYRSSNT TNKSDADVESETPCLDKSHIKEATKQVSNDSNDNIIPAVDNIQVCNTLNAGLEAQEEHTIQGKLSYYESDI
Sequences:
>Translated_231_residues MEDFLNITEANIEKQNFCVETDEIFYKGRAMNNICHSVFTSTTKEISIEKTFYSYRECKRSYNELDCSNATSFLGEIIEY SSKLWIQFKKDIPIFFENICNPGEIKVCIDGRVLDNDAEQINNTDNSDLWKISIPTVIILTLTLGVVTFLIKKKYRSSNT TNKSDADVESETPCLDKSHIKEATKQVSNDSNDNIIPAVDNIQVCNTLNAGLEAQEEHTIQGKLSYYESDI >Mature_231_residues MEDFLNITEANIEKQNFCVETDEIFYKGRAMNNICHSVFTSTTKEISIEKTFYSYRECKRSYNELDCSNATSFLGEIIEY SSKLWIQFKKDIPIFFENICNPGEIKVCIDGRVLDNDAEQINNTDNSDLWKISIPTVIILTLTLGVVTFLIKKKYRSSNT TNKSDADVESETPCLDKSHIKEATKQVSNDSNDNIIPAVDNIQVCNTLNAGLEAQEEHTIQGKLSYYESDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26304; Mature: 26304
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDFLNITEANIEKQNFCVETDEIFYKGRAMNNICHSVFTSTTKEISIEKTFYSYRECKR CCCHHHHHHHCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHH SYNELDCSNATSFLGEIIEYSSKLWIQFKKDIPIFFENICNPGEIKVCIDGRVLDNDAEQ HHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCEEEEECCEEECCCHHH INNTDNSDLWKISIPTVIILTLTLGVVTFLIKKKYRSSNTTNKSDADVESETPCLDKSHI CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH KEATKQVSNDSNDNIIPAVDNIQVCNTLNAGLEAQEEHTIQGKLSYYESDI HHHHHHHCCCCCCCEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MEDFLNITEANIEKQNFCVETDEIFYKGRAMNNICHSVFTSTTKEISIEKTFYSYRECKR CCCHHHHHHHCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHH SYNELDCSNATSFLGEIIEYSSKLWIQFKKDIPIFFENICNPGEIKVCIDGRVLDNDAEQ HHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCEEEEECCEEECCCHHH INNTDNSDLWKISIPTVIILTLTLGVVTFLIKKKYRSSNTTNKSDADVESETPCLDKSHI CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH KEATKQVSNDSNDNIIPAVDNIQVCNTLNAGLEAQEEHTIQGKLSYYESDI HHHHHHHCCCCCCCEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA