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The map label for this gene is traB [C]

Identifier: 148284638

GI number: 148284638

Start: 1130952

End: 1131416

Strand: Direct

Name: traB [C]

Synonym: OTBS_1152

Alternate gene names: 148284638

Gene position: 1130952-1131416 (Clockwise)

Preceding gene: 148284637

Following gene: 148284639

Centisome position: 53.17

GC content: 36.13

Gene sequence:

>465_bases
TTGATAGGTGAAGATGGACGTTCTGGAATTAAAGGAATCGTGGTAGATAAATCGTCTAACATAGCAAGCATGGCTGCATT
AAATGGAGTATTTAGCAATATTGCTAAGTTTCTACAAGCTAAGGCTATTAAACCTGATATGCTACCAACTTTAAACCTAG
TAGCTGGAGGTCATCAACAACAAGAGTTTCAGATTGGAGATGCGCTTCAGTCTGGAGCTTACTCTGGAGCTAGTAATGCT
TTTGATAAGCTAGCTGATTTTGCTATAAAACAAGCTGATTCTATGAGCCCAGTCGTTCTTATTGCGTCAGGTAGAGTCAT
CGATGTTGTATTTAAAAAAGGTTTTGACTTACGTGAGCACAAGAAGAAGCCACATAATTTAACTTATTCACAATCAACTA
ACAATGAAAAAGTTAATTTGCATAATAAATTCGACCAATCACAAAAGTTAGAGGAGCATTTATAA

Upstream 100 bases:

>100_bases
TTACTTTAAAGCTTGTTAAGCTCAGCATCAAGCATATTAAAACTGCTTCAAAGTAAAATTTCATTATGGAGATATTATTG
AAAACAAGGCGGAAGGCTGG

Downstream 100 bases:

>100_bases
TGAAGTTTTTATTATTGCTATTGGGCTGTATGAGCCTAACAAGCTTCTTTTTCGAAAGTAATTTTGATTGTAAAATTCCT
AAAGGGCAAAAATGTAAGTC

Product: conjugative pilus assembly protein

Products: NA

Alternate protein names: Conjugative Transfer Protein TraB; Sex Pilus Assembly Protein; Conjugative Pilus Assembly Protein

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIGEDGRSGIKGIVVDKSSNIASMAALNGVFSNIAKFLQAKAIKPDMLPTLNLVAGGHQQQEFQIGDALQSGAYSGASNA
FDKLADFAIKQADSMSPVVLIASGRVIDVVFKKGFDLREHKKKPHNLTYSQSTNNEKVNLHNKFDQSQKLEEHL

Sequences:

>Translated_154_residues
MIGEDGRSGIKGIVVDKSSNIASMAALNGVFSNIAKFLQAKAIKPDMLPTLNLVAGGHQQQEFQIGDALQSGAYSGASNA
FDKLADFAIKQADSMSPVVLIASGRVIDVVFKKGFDLREHKKKPHNLTYSQSTNNEKVNLHNKFDQSQKLEEHL
>Mature_154_residues
MIGEDGRSGIKGIVVDKSSNIASMAALNGVFSNIAKFLQAKAIKPDMLPTLNLVAGGHQQQEFQIGDALQSGAYSGASNA
FDKLADFAIKQADSMSPVVLIASGRVIDVVFKKGFDLREHKKKPHNLTYSQSTNNEKVNLHNKFDQSQKLEEHL

Specific function: Involved In F Pilus Assembly. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16727; Mature: 16727

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGEDGRSGIKGIVVDKSSNIASMAALNGVFSNIAKFLQAKAIKPDMLPTLNLVAGGHQQ
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC
QEFQIGDALQSGAYSGASNAFDKLADFAIKQADSMSPVVLIASGRVIDVVFKKGFDLREH
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHCCCCHHHH
KKKPHNLTYSQSTNNEKVNLHNKFDQSQKLEEHL
CCCCCCCEECCCCCCCEEEECCHHCHHHHHHHCC
>Mature Secondary Structure
MIGEDGRSGIKGIVVDKSSNIASMAALNGVFSNIAKFLQAKAIKPDMLPTLNLVAGGHQQ
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC
QEFQIGDALQSGAYSGASNAFDKLADFAIKQADSMSPVVLIASGRVIDVVFKKGFDLREH
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHCCCCHHHH
KKKPHNLTYSQSTNNEKVNLHNKFDQSQKLEEHL
CCCCCCCEECCCCCCCEEEECCHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA