| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is tchB
Identifier: 148284637
GI number: 148284637
Start: 1130439
End: 1130840
Strand: Direct
Name: tchB
Synonym: OTBS_1151
Alternate gene names: NA
Gene position: 1130439-1130840 (Clockwise)
Preceding gene: 148284636
Following gene: 148284638
Centisome position: 53.15
GC content: 31.09
Gene sequence:
>402_bases ATGAGTATTAGAATTTTGAGGTTTATGATAGGGTTTATTGCTTTAGTCAAGTTTAGTGATGTATATGCGGTAGAATATGA GTTAGAAGTTGATAATTTGCTGAAGCTTGAGATTTCTGATAGTGGGCCAACAAGAATTAATCTTAAAGATGAAAAAATCA ATGATATTTTTATGTATCCTCAAAATGCAGCCGAAGTTGTAGTTCATGAGTCTGGATGTTTGTTTATTGCTCCACGAGAA GAAGAAAAGAAGCTTTATTTAACAGTAATAGGAGAACACAAAACAATTCAAGATTTAATGTTAACTTTTACTCCAAAAAC TCCAAGCCATGTAACGCTTATTAATGCTGCTACAGAAGAAGCTGAAAAGGATAATTCAAAAGGAAAAATAAAATTAGCTT AA
Upstream 100 bases:
>100_bases GTAAACATATAGCTGTCGATAAGACTTACCTTTTGACTTACAAGCGAAGTCCTAATTACCTTTTGTTGTTAACTGGCGTT AAAGAGAATGGAATAAAAAA
Downstream 100 bases:
>100_bases AATGCTAGTTTTTACTTTAAAGCTTGTTAAGCTCAGCATCAAGCATATTAAAACTGCTTCAAAGTAAAATTTCATTATGG AGATATTATTGAAAACAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYPQNAAEVVVHESGCLFIAPRE EEKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAATEEAEKDNSKGKIKLA
Sequences:
>Translated_133_residues MSIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYPQNAAEVVVHESGCLFIAPRE EEKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAATEEAEKDNSKGKIKLA >Mature_132_residues SIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYPQNAAEVVVHESGCLFIAPREE EKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAATEEAEKDNSKGKIKLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15087; Mature: 14955
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYP CCEEHHHHHHHHHHHHEECCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEC QNAAEVVVHESGCLFIAPREEEKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAATEE CCCEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCH AEKDNSKGKIKLA HCCCCCCCEEEEC >Mature Secondary Structure SIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYP CEEHHHHHHHHHHHHEECCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEC QNAAEVVVHESGCLFIAPREEEKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAATEE CCCEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCH AEKDNSKGKIKLA HCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA