| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
Click here to switch to the map view.
The map label for this gene is 148284618
Identifier: 148284618
GI number: 148284618
Start: 1089656
End: 1090357
Strand: Direct
Name: 148284618
Synonym: OTBS_1108
Alternate gene names: NA
Gene position: 1089656-1090357 (Clockwise)
Preceding gene: 148284611
Following gene: 148284619
Centisome position: 51.23
GC content: 33.33
Gene sequence:
>702_bases ATGTCTGAAGTGTTTTTTAATGGACCAGCTGGTAGAATTGAGGGAGAATATGTTCAATCGGATGATTCAAAAGCTCCAGT AGCTTTAGTGTTACACCCTCATTTACCACCAGACTTTTTTCAAGGCAACATGAATCATGATGTTATAATCTGCTTACACA CTCTTTTAGTAAAAAATGGGTTTTCAGCATTGAAGATTAACTTTAGAGGTATAGGCAAATCTCAAGGCGCTTTTGATAAT GGAGTTGGTGAATTAATGGATGCAGCTACTGCTTTAGATTGGCTGCAATTACATAATCCTTCAAGTATAGATTACTTGGT AGCAGGTTTTTCATTTGGAGCTTGGATATGTATGCAATTAATTATGCGAAGGCCAGAAGTAAATAATTTTATTGCAGTAT CACCTCCTACTAATAAATTTGATTTTTCATTTTTATCTCCTTGCCCAATACCTGGTTTGATAGTTCAGGGAGAGCAAGAT AGTATAGTACCAGAAGAATCTGTACTAGAATTAGTTAACAAGTTATCAAGGCAAAAGAATATTGATGTTGAATATAAATC TTTGAGTGGTGCTGATCACTTTTTTCGAGGAAAGCTAGATGAGCTAGCTAATGTAGTAGATGAGTATATTAAACAAAATA ATAGATTATCTACAGGTAAAAAAAACACATCTAAGAAGCATCAAAATAAGTTATTACTATAA
Upstream 100 bases:
>100_bases TTGAAATATTTTTTATCATATGCTTTAGTATAGCTTAATTAGATTTTTTATTATCTAATACATTACTATTTTAGTCAACT ATTATTAAGTACAAAATATT
Downstream 100 bases:
>100_bases ACTTAAAGTCATGATAAGATGAATTATATGGCGGATAGAGTGGGATTCGAACCCACGGTACAATTTCTTGTAGCGCCGGT TTTCAAGACCGGTTCCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNGFSALKINFRGIGKSQGAFDN GVGELMDAATALDWLQLHNPSSIDYLVAGFSFGAWICMQLIMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQD SIVPEESVLELVNKLSRQKNIDVEYKSLSGADHFFRGKLDELANVVDEYIKQNNRLSTGKKNTSKKHQNKLLL
Sequences:
>Translated_233_residues MSEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNGFSALKINFRGIGKSQGAFDN GVGELMDAATALDWLQLHNPSSIDYLVAGFSFGAWICMQLIMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQD SIVPEESVLELVNKLSRQKNIDVEYKSLSGADHFFRGKLDELANVVDEYIKQNNRLSTGKKNTSKKHQNKLLL >Mature_232_residues SEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNGFSALKINFRGIGKSQGAFDNG VGELMDAATALDWLQLHNPSSIDYLVAGFSFGAWICMQLIMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQDS IVPEESVLELVNKLSRQKNIDVEYKSLSGADHFFRGKLDELANVVDEYIKQNNRLSTGKKNTSKKHQNKLLL
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 25902; Mature: 25771
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNG CCCEEECCCCCCCCCCEECCCCCCCCEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHCC FSALKINFRGIGKSQGAFDNGVGELMDAATALDWLQLHNPSSIDYLVAGFSFGAWICMQL CCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH IMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQDSIVPEESVLELVNKLSRQKN HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCC IDVEYKSLSGADHFFRGKLDELANVVDEYIKQNNRLSTGKKNTSKKHQNKLLL CCEEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure SEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNG CCEEECCCCCCCCCCEECCCCCCCCEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHCC FSALKINFRGIGKSQGAFDNGVGELMDAATALDWLQLHNPSSIDYLVAGFSFGAWICMQL CCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH IMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQDSIVPEESVLELVNKLSRQKN HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCC IDVEYKSLSGADHFFRGKLDELANVVDEYIKQNNRLSTGKKNTSKKHQNKLLL CCEEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]