Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is 148284618

Identifier: 148284618

GI number: 148284618

Start: 1089656

End: 1090357

Strand: Direct

Name: 148284618

Synonym: OTBS_1108

Alternate gene names: NA

Gene position: 1089656-1090357 (Clockwise)

Preceding gene: 148284611

Following gene: 148284619

Centisome position: 51.23

GC content: 33.33

Gene sequence:

>702_bases
ATGTCTGAAGTGTTTTTTAATGGACCAGCTGGTAGAATTGAGGGAGAATATGTTCAATCGGATGATTCAAAAGCTCCAGT
AGCTTTAGTGTTACACCCTCATTTACCACCAGACTTTTTTCAAGGCAACATGAATCATGATGTTATAATCTGCTTACACA
CTCTTTTAGTAAAAAATGGGTTTTCAGCATTGAAGATTAACTTTAGAGGTATAGGCAAATCTCAAGGCGCTTTTGATAAT
GGAGTTGGTGAATTAATGGATGCAGCTACTGCTTTAGATTGGCTGCAATTACATAATCCTTCAAGTATAGATTACTTGGT
AGCAGGTTTTTCATTTGGAGCTTGGATATGTATGCAATTAATTATGCGAAGGCCAGAAGTAAATAATTTTATTGCAGTAT
CACCTCCTACTAATAAATTTGATTTTTCATTTTTATCTCCTTGCCCAATACCTGGTTTGATAGTTCAGGGAGAGCAAGAT
AGTATAGTACCAGAAGAATCTGTACTAGAATTAGTTAACAAGTTATCAAGGCAAAAGAATATTGATGTTGAATATAAATC
TTTGAGTGGTGCTGATCACTTTTTTCGAGGAAAGCTAGATGAGCTAGCTAATGTAGTAGATGAGTATATTAAACAAAATA
ATAGATTATCTACAGGTAAAAAAAACACATCTAAGAAGCATCAAAATAAGTTATTACTATAA

Upstream 100 bases:

>100_bases
TTGAAATATTTTTTATCATATGCTTTAGTATAGCTTAATTAGATTTTTTATTATCTAATACATTACTATTTTAGTCAACT
ATTATTAAGTACAAAATATT

Downstream 100 bases:

>100_bases
ACTTAAAGTCATGATAAGATGAATTATATGGCGGATAGAGTGGGATTCGAACCCACGGTACAATTTCTTGTAGCGCCGGT
TTTCAAGACCGGTTCCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNGFSALKINFRGIGKSQGAFDN
GVGELMDAATALDWLQLHNPSSIDYLVAGFSFGAWICMQLIMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQD
SIVPEESVLELVNKLSRQKNIDVEYKSLSGADHFFRGKLDELANVVDEYIKQNNRLSTGKKNTSKKHQNKLLL

Sequences:

>Translated_233_residues
MSEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNGFSALKINFRGIGKSQGAFDN
GVGELMDAATALDWLQLHNPSSIDYLVAGFSFGAWICMQLIMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQD
SIVPEESVLELVNKLSRQKNIDVEYKSLSGADHFFRGKLDELANVVDEYIKQNNRLSTGKKNTSKKHQNKLLL
>Mature_232_residues
SEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNGFSALKINFRGIGKSQGAFDNG
VGELMDAATALDWLQLHNPSSIDYLVAGFSFGAWICMQLIMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQDS
IVPEESVLELVNKLSRQKNIDVEYKSLSGADHFFRGKLDELANVVDEYIKQNNRLSTGKKNTSKKHQNKLLL

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 25902; Mature: 25771

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNG
CCCEEECCCCCCCCCCEECCCCCCCCEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHCC
FSALKINFRGIGKSQGAFDNGVGELMDAATALDWLQLHNPSSIDYLVAGFSFGAWICMQL
CCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH
IMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQDSIVPEESVLELVNKLSRQKN
HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCC
IDVEYKSLSGADHFFRGKLDELANVVDEYIKQNNRLSTGKKNTSKKHQNKLLL
CCEEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
SEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNG
CCEEECCCCCCCCCCEECCCCCCCCEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHCC
FSALKINFRGIGKSQGAFDNGVGELMDAATALDWLQLHNPSSIDYLVAGFSFGAWICMQL
CCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH
IMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQDSIVPEESVLELVNKLSRQKN
HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCC
IDVEYKSLSGADHFFRGKLDELANVVDEYIKQNNRLSTGKKNTSKKHQNKLLL
CCEEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]