| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284611
Identifier: 148284611
GI number: 148284611
Start: 1078504
End: 1078917
Strand: Direct
Name: 148284611
Synonym: OTBS_1096
Alternate gene names: NA
Gene position: 1078504-1078917 (Clockwise)
Preceding gene: 148284602
Following gene: 148284618
Centisome position: 50.7
GC content: 30.19
Gene sequence:
>414_bases GTGAATAAAATGCGATATATTGAATTCAAAAGTACATGCATGAAAAAGTTAAATAATCTTTCAATTGAGAGGAAGAAAGC ACAGCAACTTGTTAAGTTCGCAAAAATAAACTTACAAAATATACAAAAAAAGAATGAGGAATATAATAAGAAATTTTTGG CTGAATTAGTCACTGACATGACGCAAGGATATAATGATGATCAAAAAATTAAACGTATGGAGAGTAAGATAGAAAAGTAC TCAAGTAAGTTTAAATCTTTAATGCAGAAGGATCAATCTGGAAGTAGAAGTAAGGATTTAGATTATGTAACTAATGAAAT ATCAGAATGTGCAATGAAAGTTCGTTTAGCATTTGAGGAGCAAGTAGTAAAGTACTGCGGAGAAGAAAATCTTATCAATG ACTGGGACATGTGA
Upstream 100 bases:
>100_bases TCAGACTTTCTATTATCCTAAATTAGCGTTAAGCTATATTATCATCTCTTTACTTTTTCTGAGGTTCTGTTATTAATATA GTAAATCTTCAAAATATTGG
Downstream 100 bases:
>100_bases GTAGACATCTTTATAAGAGATGAATGAATTACAGGATGTCTTTTTTGTGATAGGTAAGCTTATATGTATCAATAAAGTGT CTTCTTAAATTAAGAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MNKMRYIEFKSTCMKKLNNLSIERKKAQQLVKFAKINLQNIQKKNEEYNKKFLAELVTDMTQGYNDDQKIKRMESKIEKY SSKFKSLMQKDQSGSRSKDLDYVTNEISECAMKVRLAFEEQVVKYCGEENLINDWDM
Sequences:
>Translated_137_residues MNKMRYIEFKSTCMKKLNNLSIERKKAQQLVKFAKINLQNIQKKNEEYNKKFLAELVTDMTQGYNDDQKIKRMESKIEKY SSKFKSLMQKDQSGSRSKDLDYVTNEISECAMKVRLAFEEQVVKYCGEENLINDWDM >Mature_137_residues MNKMRYIEFKSTCMKKLNNLSIERKKAQQLVKFAKINLQNIQKKNEEYNKKFLAELVTDMTQGYNDDQKIKRMESKIEKY SSKFKSLMQKDQSGSRSKDLDYVTNEISECAMKVRLAFEEQVVKYCGEENLINDWDM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16320; Mature: 16320
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKMRYIEFKSTCMKKLNNLSIERKKAQQLVKFAKINLQNIQKKNEEYNKKFLAELVTDM CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQGYNDDQKIKRMESKIEKYSSKFKSLMQKDQSGSRSKDLDYVTNEISECAMKVRLAFEE HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QVVKYCGEENLINDWDM HHHHHCCCCCCCCCCCC >Mature Secondary Structure MNKMRYIEFKSTCMKKLNNLSIERKKAQQLVKFAKINLQNIQKKNEEYNKKFLAELVTDM CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQGYNDDQKIKRMESKIEKYSSKFKSLMQKDQSGSRSKDLDYVTNEISECAMKVRLAFEE HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QVVKYCGEENLINDWDM HHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA