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The map label for this gene is yrbE [C]

Identifier: 148284291

GI number: 148284291

Start: 471837

End: 472742

Strand: Direct

Name: yrbE [C]

Synonym: OTBS_0495

Alternate gene names: 148284291

Gene position: 471837-472742 (Clockwise)

Preceding gene: 148284290

Following gene: 148284292

Centisome position: 22.18

GC content: 30.35

Gene sequence:

>906_bases
TTGATTTGGTTATTTCAAAAATTATATATACCGAAGAAATCAGAGTGCTGTTGCTTTTTTCAAACTTCACTTATATCATT
TACAATAAACTTAATATTACATCTTAAACATAAAATGATGAATATAATTTTAGCTTTAAAGGTAATTGGGCAAAGAACTA
TTAAAATATTTTATAATATAATTCTATTTCAAAATTTTCTCTTTGCATCAATAAAAGGAATTTTTACTCTTCCTTATTAT
TTCAATATTACAATACAAGCAATAATTAACATTGGCTTCTATTCTCTGCCAATAGTCGCAGCAACATCACTCTGTTCTGG
AGCGGTATTAGCACTACAAACATATGAAGGAGTAGTGCGTTCGTCAGCTATACATGCCATCCCCATGATAATAGTAACAT
CAATTACCAGAGAATTAGGGCCTGTAATAGTAGGACTTATTGTAGCAGGAAGAATTGGTGCTTCTATAGTAGCAGAAATA
GGCACTATGAGAGTAACGGAACAAATAGATGCATTATTTACACTAGCTACTGATCCAATAAAATATCTAGTTACTCCTAG
ATTAGTAGCGACAACATTGTCTTTACCATTTCTTGTGCTTACTAGTGATGTTATTGGAGTATTTGGTGGATATCTAGTTT
CAGTATATAGACTTAACTTCAATAGCTACGAGTATATTCAAAGCACAATTCATCACTTAACATCAACCGATGTAATTTCT
GGATTAATTAAAGCAATTGTATTTGGTATGATTATTGGAATAACAAGCTGCTTTCATGGCTACTATTCTGACAAAGGAGC
AAAAGGAGTAGGAATTGCTACAACTTATGGAGTAGTTCATTCATCTATATTAATACTATTAAGTAACTATATAATGACAG
AATTATTACTTTCTCAATATATATAA

Upstream 100 bases:

>100_bases
ATCTAAGACCGAATCTTTTACGTCTATTTCAATATTTATCAGCAATAATTTTGAACTACGTTAACCAGTTTCGAAAGAGG
TCTATTAATAAAGTTCTCAA

Downstream 100 bases:

>100_bases
TATAAAACAATACTGTAAAAAAAGCTGCATGAGTATAATAATTAAAAACCTTTGCAAGGCGTTCAAATCGAAAATAGTAC
TAAATAAAATAAATCTTGAA

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MIWLFQKLYIPKKSECCCFFQTSLISFTINLILHLKHKMMNIILALKVIGQRTIKIFYNIILFQNFLFASIKGIFTLPYY
FNITIQAIINIGFYSLPIVAATSLCSGAVLALQTYEGVVRSSAIHAIPMIIVTSITRELGPVIVGLIVAGRIGASIVAEI
GTMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIGVFGGYLVSVYRLNFNSYEYIQSTIHHLTSTDVIS
GLIKAIVFGMIIGITSCFHGYYSDKGAKGVGIATTYGVVHSSILILLSNYIMTELLLSQYI

Sequences:

>Translated_301_residues
MIWLFQKLYIPKKSECCCFFQTSLISFTINLILHLKHKMMNIILALKVIGQRTIKIFYNIILFQNFLFASIKGIFTLPYY
FNITIQAIINIGFYSLPIVAATSLCSGAVLALQTYEGVVRSSAIHAIPMIIVTSITRELGPVIVGLIVAGRIGASIVAEI
GTMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIGVFGGYLVSVYRLNFNSYEYIQSTIHHLTSTDVIS
GLIKAIVFGMIIGITSCFHGYYSDKGAKGVGIATTYGVVHSSILILLSNYIMTELLLSQYI
>Mature_301_residues
MIWLFQKLYIPKKSECCCFFQTSLISFTINLILHLKHKMMNIILALKVIGQRTIKIFYNIILFQNFLFASIKGIFTLPYY
FNITIQAIINIGFYSLPIVAATSLCSGAVLALQTYEGVVRSSAIHAIPMIIVTSITRELGPVIVGLIVAGRIGASIVAEI
GTMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIGVFGGYLVSVYRLNFNSYEYIQSTIHHLTSTDVIS
GLIKAIVFGMIIGITSCFHGYYSDKGAKGVGIATTYGVVHSSILILLSNYIMTELLLSQYI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=258, Percent_Identity=31.7829457364341, Blast_Score=137, Evalue=9e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 33219; Mature: 33219

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWLFQKLYIPKKSECCCFFQTSLISFTINLILHLKHKMMNIILALKVIGQRTIKIFYNI
CEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILFQNFLFASIKGIFTLPYYFNITIQAIINIGFYSLPIVAATSLCSGAVLALQTYEGVVR
HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SSAIHAIPMIIVTSITRELGPVIVGLIVAGRIGASIVAEIGTMRVTEQIDALFTLATDPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KYLVTPRLVATTLSLPFLVLTSDVIGVFGGYLVSVYRLNFNSYEYIQSTIHHLTSTDVIS
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GLIKAIVFGMIIGITSCFHGYYSDKGAKGVGIATTYGVVHSSILILLSNYIMTELLLSQY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
I
C
>Mature Secondary Structure
MIWLFQKLYIPKKSECCCFFQTSLISFTINLILHLKHKMMNIILALKVIGQRTIKIFYNI
CEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILFQNFLFASIKGIFTLPYYFNITIQAIINIGFYSLPIVAATSLCSGAVLALQTYEGVVR
HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SSAIHAIPMIIVTSITRELGPVIVGLIVAGRIGASIVAEIGTMRVTEQIDALFTLATDPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KYLVTPRLVATTLSLPFLVLTSDVIGVFGGYLVSVYRLNFNSYEYIQSTIHHLTSTDVIS
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GLIKAIVFGMIIGITSCFHGYYSDKGAKGVGIATTYGVVHSSILILLSNYIMTELLLSQY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA