Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is 148284242

Identifier: 148284242

GI number: 148284242

Start: 387862

End: 389760

Strand: Direct

Name: 148284242

Synonym: OTBS_0408

Alternate gene names: NA

Gene position: 387862-389760 (Clockwise)

Preceding gene: 148284240

Following gene: 148284243

Centisome position: 18.23

GC content: 28.86

Gene sequence:

>1899_bases
ATGTTATATAGGGTATTATTACTACAATTAATGGTTTTAATTGTAACAATCAATCCAATACATGCAAGATGGAAGTATTA
TAATGACAGTAATTTAGAAATAATACACTTCGAACAAAATATCATAGTTAATAGCGATGGTTCAAGTGAAGAGATAATAG
AGCAGCAGGTAAAAATCCTCAATGAGGTTGGTCGTAAATTTTTTACTAATTATATGATAGAATATGATAGTGTACATTCT
CAAATAGATATAATAATTGCTAAAACAATCTTCGAAGGAAAAGAATATAATGTAGATCTTAAAACAATTAAGAGCATACC
TTTAGCTAGTAGCAGTCAGGGTTTTCATCAACAGCAGCAAATTTTAATAAATTTTGCTAAAGTTGAAATTGGATCAGAAA
TACATTTAACATATACGAGAAAAAATCAGACAAATGCTGAAAATTATTATAGTAACTTATTTGAATTTGGTACTAATAGT
TGGCAACAAAAAGCACATATAAAAATTAATTCTGTATTACCTTTATATATTAAAATTAATGATCCTCATAATGCTTTGGA
AGTAAAAACAAGCTCTAAAGATAAGTTTCATTCTGCTGAAATAACTTTAATTAAGCCATTAACTACTGAGTTAACAAACG
AACCTGAAAACTCATTATTAAGCAATCAGTTTAAAACGTGGGTATCTATTGCATCTACTAACACATGGGAAGATGTAGCA
AGCAAATTTACTGATGATTATTATAAAATACTAAATCAAAAATTACCGAAGTTGTTTAAAACTATTGCTAATAAAGCACA
AAAACATACAAAATCTGAAGATCAAATTAATTCTGTTACTTCAGATTTAATTCATGCAGTTCAATATCATGGAGATTATA
GATCCATTAGATATGGTAAATCTGTACCCTGGAGCTTAGAACAAACAGCTAATACTCAATTAGGCGATTGTAAAGATTTC
TCAATTAGTACAGCAGCAATTTTACAAAACATAGGTTACAAAGTACAGCCAGCTTTTGTTAATAGAGGAATACAAGCTTT
TGAAACTAAATTATGGCTTCCTTCTGTAGAACATTATAATCATGCAATACTTAGAGCAATAGATAAAGATGGCAAGTTAT
ATTGGATTGATCCTACGAATTTTGTGAGTATGGCTGATGGAATTTTTCCTGATATTGCTAATAGAATGTCACTAGTATTA
GATCCAGAAAACCCTAGCTGTGATCATATACCAAATATTAATCCAAATCATTCTCAGTTGATAATAGAAGAGTCAATCTC
AAGAGCTGAAAACAATTCAGCTTACTGGAAAGGTAAATTAATACTTCTAGGAGAGCAAGCGTATTCAATAACTGGAGCAG
AATTGAAAATGTCGCAACAGCAGATAAAAGATTTGATTTTTAACTGGGCAAGTGGCTCTTTTTTAGAAGAGCACGATAAG
ATCAAAATTATCTTACCAGATCTAACATCAAAAACAGTGAAAGATTTAACTTTTGAGTATGAATATAACAAGCCTAATTC
CATATTTAAATCTAACATGGGTTCAGTATTAGTACCACTGAATTATTTATCTCATATTTCTAATGCAGAGCCAGAGCAGA
TTGGCGATCTTTTTTTAGGTTCTCCATGCACTTTTATTCATCGAACTGTAATAAAAGATGTTAAAATAGAAAATATTAAT
GTCTTTAATTTTGAAATTGATACTCCATGGGTTTACATTCAAAGAGCATGTCAATATCAAGGCAATGATACAGATATTAC
AGTTAAAATGATAATTCATAAATCTTTAGTATCAAATAAAGATCTAAAAAGTGATATATACAAAAAATTAAAAGACGCTA
TTAAACAAAACTTTGAATCAACAGCAATAGTTTTTGATGATTCTAAAATGATGAAATAA

Upstream 100 bases:

>100_bases
TCTATAGTATAAATCTTAATATAATTCAAGAAAGCTATTATAGCTAGAAAAACGTCAGTTAGTTTACACAAGTACATTTA
TATTTATTTTAGAATTAAAT

Downstream 100 bases:

>100_bases
AGATATACCATACTCTATAAAGTAGCTATTAAGGTAACTTATGATATATAAAATCTTCAGAACTTTACTACAATTAGTAT
TATTAGTAATATTTATTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MLYRVLLLQLMVLIVTINPIHARWKYYNDSNLEIIHFEQNIIVNSDGSSEEIIEQQVKILNEVGRKFFTNYMIEYDSVHS
QIDIIIAKTIFEGKEYNVDLKTIKSIPLASSSQGFHQQQQILINFAKVEIGSEIHLTYTRKNQTNAENYYSNLFEFGTNS
WQQKAHIKINSVLPLYIKINDPHNALEVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQFKTWVSIASTNTWEDVA
SKFTDDYYKILNQKLPKLFKTIANKAQKHTKSEDQINSVTSDLIHAVQYHGDYRSIRYGKSVPWSLEQTANTQLGDCKDF
SISTAAILQNIGYKVQPAFVNRGIQAFETKLWLPSVEHYNHAILRAIDKDGKLYWIDPTNFVSMADGIFPDIANRMSLVL
DPENPSCDHIPNINPNHSQLIIEESISRAENNSAYWKGKLILLGEQAYSITGAELKMSQQQIKDLIFNWASGSFLEEHDK
IKIILPDLTSKTVKDLTFEYEYNKPNSIFKSNMGSVLVPLNYLSHISNAEPEQIGDLFLGSPCTFIHRTVIKDVKIENIN
VFNFEIDTPWVYIQRACQYQGNDTDITVKMIIHKSLVSNKDLKSDIYKKLKDAIKQNFESTAIVFDDSKMMK

Sequences:

>Translated_632_residues
MLYRVLLLQLMVLIVTINPIHARWKYYNDSNLEIIHFEQNIIVNSDGSSEEIIEQQVKILNEVGRKFFTNYMIEYDSVHS
QIDIIIAKTIFEGKEYNVDLKTIKSIPLASSSQGFHQQQQILINFAKVEIGSEIHLTYTRKNQTNAENYYSNLFEFGTNS
WQQKAHIKINSVLPLYIKINDPHNALEVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQFKTWVSIASTNTWEDVA
SKFTDDYYKILNQKLPKLFKTIANKAQKHTKSEDQINSVTSDLIHAVQYHGDYRSIRYGKSVPWSLEQTANTQLGDCKDF
SISTAAILQNIGYKVQPAFVNRGIQAFETKLWLPSVEHYNHAILRAIDKDGKLYWIDPTNFVSMADGIFPDIANRMSLVL
DPENPSCDHIPNINPNHSQLIIEESISRAENNSAYWKGKLILLGEQAYSITGAELKMSQQQIKDLIFNWASGSFLEEHDK
IKIILPDLTSKTVKDLTFEYEYNKPNSIFKSNMGSVLVPLNYLSHISNAEPEQIGDLFLGSPCTFIHRTVIKDVKIENIN
VFNFEIDTPWVYIQRACQYQGNDTDITVKMIIHKSLVSNKDLKSDIYKKLKDAIKQNFESTAIVFDDSKMMK
>Mature_632_residues
MLYRVLLLQLMVLIVTINPIHARWKYYNDSNLEIIHFEQNIIVNSDGSSEEIIEQQVKILNEVGRKFFTNYMIEYDSVHS
QIDIIIAKTIFEGKEYNVDLKTIKSIPLASSSQGFHQQQQILINFAKVEIGSEIHLTYTRKNQTNAENYYSNLFEFGTNS
WQQKAHIKINSVLPLYIKINDPHNALEVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQFKTWVSIASTNTWEDVA
SKFTDDYYKILNQKLPKLFKTIANKAQKHTKSEDQINSVTSDLIHAVQYHGDYRSIRYGKSVPWSLEQTANTQLGDCKDF
SISTAAILQNIGYKVQPAFVNRGIQAFETKLWLPSVEHYNHAILRAIDKDGKLYWIDPTNFVSMADGIFPDIANRMSLVL
DPENPSCDHIPNINPNHSQLIIEESISRAENNSAYWKGKLILLGEQAYSITGAELKMSQQQIKDLIFNWASGSFLEEHDK
IKIILPDLTSKTVKDLTFEYEYNKPNSIFKSNMGSVLVPLNYLSHISNAEPEQIGDLFLGSPCTFIHRTVIKDVKIENIN
VFNFEIDTPWVYIQRACQYQGNDTDITVKMIIHKSLVSNKDLKSDIYKKLKDAIKQNFESTAIVFDDSKMMK

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72507; Mature: 72507

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYRVLLLQLMVLIVTINPIHARWKYYNDSNLEIIHFEQNIIVNSDGSSEEIIEQQVKIL
CHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECEEEEECCCCHHHHHHHHHHHH
NEVGRKFFTNYMIEYDSVHSQIDIIIAKTIFEGKEYNVDLKTIKSIPLASSSQGFHQQQQ
HHHHHHHHHHHHEEECCCCCCEEEEEEEEHCCCCCCCEEHHHHCCCCCCCCCCCHHHHHH
ILINFAKVEIGSEIHLTYTRKNQTNAENYYSNLFEFGTNSWQQKAHIKINSVLPLYIKIN
HHHEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEEEEC
DPHNALEVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQFKTWVSIASTNTWEDVA
CCCCEEEEECCCCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHHHHEEEECCCCHHHHH
SKFTDDYYKILNQKLPKLFKTIANKAQKHTKSEDQINSVTSDLIHAVQYHGDYRSIRYGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC
SVPWSLEQTANTQLGDCKDFSISTAAILQNIGYKVQPAFVNRGIQAFETKLWLPSVEHYN
CCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHCCHHHHHHHHCCCCHHHHC
HAILRAIDKDGKLYWIDPTNFVSMADGIFPDIANRMSLVLDPENPSCDHIPNINPNHSQL
HHHHHEECCCCCEEEECCCCHHHHHCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCEE
IIEESISRAENNSAYWKGKLILLGEQAYSITGAELKMSQQQIKDLIFNWASGSFLEEHDK
EEHHHHHHCCCCCCEEEEEEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
IKIILPDLTSKTVKDLTFEYEYNKPNSIFKSNMGSVLVPLNYLSHISNAEPEQIGDLFLG
EEEEECCCCCHHHHHEEEEEECCCCCHHHHCCCCCEEEEHHHHHHCCCCCHHHHHHHHCC
SPCTFIHRTVIKDVKIENINVFNFEIDTPWVYIQRACQYQGNDTDITVKMIIHKSLVSNK
CCHHHHHHHHHHHCEECEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEHHHHHCCC
DLKSDIYKKLKDAIKQNFESTAIVFDDSKMMK
CHHHHHHHHHHHHHHCCCCCEEEEECCHHCCC
>Mature Secondary Structure
MLYRVLLLQLMVLIVTINPIHARWKYYNDSNLEIIHFEQNIIVNSDGSSEEIIEQQVKIL
CHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECEEEEECCCCHHHHHHHHHHHH
NEVGRKFFTNYMIEYDSVHSQIDIIIAKTIFEGKEYNVDLKTIKSIPLASSSQGFHQQQQ
HHHHHHHHHHHHEEECCCCCCEEEEEEEEHCCCCCCCEEHHHHCCCCCCCCCCCHHHHHH
ILINFAKVEIGSEIHLTYTRKNQTNAENYYSNLFEFGTNSWQQKAHIKINSVLPLYIKIN
HHHEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEEEEC
DPHNALEVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQFKTWVSIASTNTWEDVA
CCCCEEEEECCCCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHHHHEEEECCCCHHHHH
SKFTDDYYKILNQKLPKLFKTIANKAQKHTKSEDQINSVTSDLIHAVQYHGDYRSIRYGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC
SVPWSLEQTANTQLGDCKDFSISTAAILQNIGYKVQPAFVNRGIQAFETKLWLPSVEHYN
CCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHCCHHHHHHHHCCCCHHHHC
HAILRAIDKDGKLYWIDPTNFVSMADGIFPDIANRMSLVLDPENPSCDHIPNINPNHSQL
HHHHHEECCCCCEEEECCCCHHHHHCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCEE
IIEESISRAENNSAYWKGKLILLGEQAYSITGAELKMSQQQIKDLIFNWASGSFLEEHDK
EEHHHHHHCCCCCCEEEEEEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
IKIILPDLTSKTVKDLTFEYEYNKPNSIFKSNMGSVLVPLNYLSHISNAEPEQIGDLFLG
EEEEECCCCCHHHHHEEEEEECCCCCHHHHCCCCCEEEEHHHHHHCCCCCHHHHHHHHCC
SPCTFIHRTVIKDVKIENINVFNFEIDTPWVYIQRACQYQGNDTDITVKMIIHKSLVSNK
CCHHHHHHHHHHHCEECEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEHHHHHCCC
DLKSDIYKKLKDAIKQNFESTAIVFDDSKMMK
CHHHHHHHHHHHHHHCCCCCEEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA