Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is 148284243

Identifier: 148284243

GI number: 148284243

Start: 389801

End: 391729

Strand: Direct

Name: 148284243

Synonym: OTBS_0409

Alternate gene names: NA

Gene position: 389801-391729 (Clockwise)

Preceding gene: 148284242

Following gene: 148284244

Centisome position: 18.33

GC content: 28.36

Gene sequence:

>1929_bases
ATGATATATAAAATCTTCAGAACTTTACTACAATTAGTATTATTAGTAATATTTATTAATCCCTCAAATGCAGAGTGGCA
AAATTTAGATGATAGCACAATAGAAATCAAAGCATACAATCTAGATATAGCAATCGATAAAGATGGATCAGAGGAACATG
CTGTTTATATGCATGCCAAAATTCTTAAAGAGCAAGGTCGTATGGTTTTTGCTAGCTATCGGTTACCATATTTATATAGA
GAAAATATTGATACAATAAAAATATTAAAAGCTCAAACAATCTTAAATGGTAAAAAATATAATGTTTCTGCTGATTCTAT
AGAAGATAAACCATTAGCTGCTACAGGTCTTGATAATGATATCTATAGACAGATATCATTAACTTTTCCTAAACTAGAAA
TTGGAACAGAAATATTTCTAAAGTATAAGGTTACTTCTAAGTCTCCACTTGAAGGAGTCTATAGCGATATTTTAGGATTA
TTACCATATGGCTATCATAAAAAAATGCAAATCAATATTAATTCGAAATTACCATTGGATACTAAAATTAATGATCCATA
TTGCAAACTACGTGTTAATGCAAGTACTACAAAAATTAATAATGATGAACATACCAGTTCTATTAAAATAACATTACTGA
AGCCATTGACTAACATGTTAAAAAATGAACCAAAATGTTCTGTTCTAAATGAACAATATAATACTTGGGTTTCTGTATCT
ACTATTAGCAAATGGGAAAAATTAGGAGATAAATTAAGTAGGGATTACTTTAAAGTTATTAATCAACCACTGCCAAAACT
ATTTGCTGCTATTGCTGAAGATGCAAAACAATATTCAAATTATACTGAACAAATTGATTTTGTTACTTCATCATTTAATG
AAAAAATACAATATATTCCAGGCTGGCGTTCAACTAACGGCAAATTCATTCCTAGAGACTTAATTAAAGTTATGAACTTT
GAAAAAGGAGATTGTAGAGACTTTATCGTTAGTATAGCTGCTATACTAAAAAATATAGGATATAAGGTGTATCCAGCTTT
AATACGTGCAGGAGAAATCTTTACTGCTCCAGTATTACATCTTCCTAATTTTTGTAGTTTTGATTATATAATACTTAAAG
TGATTGATAAAAATGACAAGATATACTGGATTGATCCTTGCAATAGTTTAAGCATGGCTAATGGAATATTCCCTAATATT
GCTAATAGAATGGCATTAGTACTTGATCCAGAAAGATCAAGTTATGAACAAGTCTCAAGTATTGATCCAAAACATTCCCA
AAGAATTCATAACAGTACTCTAGAAATAGAAGGTAATATAACTAATTGGAAAGGATCAATAAGTTATATAGGAGAAAACT
CAGCTATTTTACTGCACAATAAATTGCTTTATATGTCTCAGCAACAAATTAAAGAATTATTTTTTAATGATATAAGTGGC
ATTTATTTAGAAGAGCATAATAAGAAAAATATAACTTTACCAAGCGTTAATTTGAAGCTGCCAAGAATAGTTAAAGATGG
AACTATTGAGTATGAATATAACACTGATTGCCAAATAAAGAAAACTAATGCAGGGCCTGTTTTATTTGCTTCTATAGGAT
ATAACTCAGTTTTTAACAATATAATCAGTGTTGCTCCAAAACAAGTAGGTGATCTTTTTATAGGTGCACCTCATACAAAT
TATAACAATCTTGTAATTAAGAATCTAAAACTTAAAAATATTGATTATCTTAACTACGTAATCGATACTCCATGGATTTA
TGTTAAAAGATCATGCAAGCATCAAGGTGATGATACAGAAATCATATCTAAGATAGTTATACGACAGTCTTTAATACCAA
ATAATGATTTAAAAAGTGATGTATATAAAAAGCTGAAGGATGATATTGAACAACACTTTAATAAAACTGCAATAGTTTTA
ACTGAGTAA

Upstream 100 bases:

>100_bases
ATTAAACAAAACTTTGAATCAACAGCAATAGTTTTTGATGATTCTAAAATGATGAAATAAAGATATACCATACTCTATAA
AGTAGCTATTAAGGTAACTT

Downstream 100 bases:

>100_bases
ATTATCAAAAAAACAAGCAAAGAAAGGAATATCTATTATAATAGTTCAATTTTTTATTACATTTAAAGTAAGAAAAATTG
AATAAATTAATTGACATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSTIEIKAYNLDIAIDKDGSEEHAVYMHAKILKEQGRMVFASYRLPYLYR
ENIDTIKILKAQTILNGKKYNVSADSIEDKPLAATGLDNDIYRQISLTFPKLEIGTEIFLKYKVTSKSPLEGVYSDILGL
LPYGYHKKMQININSKLPLDTKINDPYCKLRVNASTTKINNDEHTSSIKITLLKPLTNMLKNEPKCSVLNEQYNTWVSVS
TISKWEKLGDKLSRDYFKVINQPLPKLFAAIAEDAKQYSNYTEQIDFVTSSFNEKIQYIPGWRSTNGKFIPRDLIKVMNF
EKGDCRDFIVSIAAILKNIGYKVYPALIRAGEIFTAPVLHLPNFCSFDYIILKVIDKNDKIYWIDPCNSLSMANGIFPNI
ANRMALVLDPERSSYEQVSSIDPKHSQRIHNSTLEIEGNITNWKGSISYIGENSAILLHNKLLYMSQQQIKELFFNDISG
IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNNIISVAPKQVGDLFIGAPHTN
YNNLVIKNLKLKNIDYLNYVIDTPWIYVKRSCKHQGDDTEIISKIVIRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVL
TE

Sequences:

>Translated_642_residues
MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSTIEIKAYNLDIAIDKDGSEEHAVYMHAKILKEQGRMVFASYRLPYLYR
ENIDTIKILKAQTILNGKKYNVSADSIEDKPLAATGLDNDIYRQISLTFPKLEIGTEIFLKYKVTSKSPLEGVYSDILGL
LPYGYHKKMQININSKLPLDTKINDPYCKLRVNASTTKINNDEHTSSIKITLLKPLTNMLKNEPKCSVLNEQYNTWVSVS
TISKWEKLGDKLSRDYFKVINQPLPKLFAAIAEDAKQYSNYTEQIDFVTSSFNEKIQYIPGWRSTNGKFIPRDLIKVMNF
EKGDCRDFIVSIAAILKNIGYKVYPALIRAGEIFTAPVLHLPNFCSFDYIILKVIDKNDKIYWIDPCNSLSMANGIFPNI
ANRMALVLDPERSSYEQVSSIDPKHSQRIHNSTLEIEGNITNWKGSISYIGENSAILLHNKLLYMSQQQIKELFFNDISG
IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNNIISVAPKQVGDLFIGAPHTN
YNNLVIKNLKLKNIDYLNYVIDTPWIYVKRSCKHQGDDTEIISKIVIRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVL
TE
>Mature_642_residues
MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSTIEIKAYNLDIAIDKDGSEEHAVYMHAKILKEQGRMVFASYRLPYLYR
ENIDTIKILKAQTILNGKKYNVSADSIEDKPLAATGLDNDIYRQISLTFPKLEIGTEIFLKYKVTSKSPLEGVYSDILGL
LPYGYHKKMQININSKLPLDTKINDPYCKLRVNASTTKINNDEHTSSIKITLLKPLTNMLKNEPKCSVLNEQYNTWVSVS
TISKWEKLGDKLSRDYFKVINQPLPKLFAAIAEDAKQYSNYTEQIDFVTSSFNEKIQYIPGWRSTNGKFIPRDLIKVMNF
EKGDCRDFIVSIAAILKNIGYKVYPALIRAGEIFTAPVLHLPNFCSFDYIILKVIDKNDKIYWIDPCNSLSMANGIFPNI
ANRMALVLDPERSSYEQVSSIDPKHSQRIHNSTLEIEGNITNWKGSISYIGENSAILLHNKLLYMSQQQIKELFFNDISG
IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNNIISVAPKQVGDLFIGAPHTN
YNNLVIKNLKLKNIDYLNYVIDTPWIYVKRSCKHQGDDTEIISKIVIRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVL
TE

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73511; Mature: 73511

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSTIEIKAYNLDIAIDKDGSEEHAVYMHAK
CHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEHHHH
ILKEQGRMVFASYRLPYLYRENIDTIKILKAQTILNGKKYNVSADSIEDKPLAATGLDND
HHHHCCCEEEEECCCCCHHHCCCCEEEEEEEHHHCCCCEEECCCCCCCCCCCEECCCCHH
IYRQISLTFPKLEIGTEIFLKYKVTSKSPLEGVYSDILGLLPYGYHKKMQININSKLPLD
HHHEEEEECCCEECCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
TKINDPYCKLRVNASTTKINNDEHTSSIKITLLKPLTNMLKNEPKCSVLNEQYNTWVSVS
CCCCCCEEEEEEECCEEECCCCCCCCEEEEEEEHHHHHHHCCCCCCEECCCCCCCEEEEH
TISKWEKLGDKLSRDYFKVINQPLPKLFAAIAEDAKQYSNYTEQIDFVTSSFNEKIQYIP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECC
GWRSTNGKFIPRDLIKVMNFEKGDCRDFIVSIAAILKNIGYKVYPALIRAGEIFTAPVLH
CEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCEEECHHHH
LPNFCSFDYIILKVIDKNDKIYWIDPCNSLSMANGIFPNIANRMALVLDPERSSYEQVSS
CCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCHHCCEEEEECCCCCCHHHHHC
IDPKHSQRIHNSTLEIEGNITNWKGSISYIGENSAILLHNKLLYMSQQQIKELFFNDISG
CCCHHHHHHCCCEEEEECCEECCCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHCCCC
IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNN
EEEECCCCCCEEECCCCCCCCCEEECCEEEEEECCCEEEEECCCCCEEEEECCHHHHHHH
IISVAPKQVGDLFIGAPHTNYNNLVIKNLKLKNIDYLNYVIDTPWIYVKRSCKHQGDDTE
HHHHCCHHHCCEEEECCCCCCCCEEEEEEEECCCEEEEEEECCCEEEEEHHCCCCCCCHH
IISKIVIRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVLTE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure
MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSTIEIKAYNLDIAIDKDGSEEHAVYMHAK
CHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEHHHH
ILKEQGRMVFASYRLPYLYRENIDTIKILKAQTILNGKKYNVSADSIEDKPLAATGLDND
HHHHCCCEEEEECCCCCHHHCCCCEEEEEEEHHHCCCCEEECCCCCCCCCCCEECCCCHH
IYRQISLTFPKLEIGTEIFLKYKVTSKSPLEGVYSDILGLLPYGYHKKMQININSKLPLD
HHHEEEEECCCEECCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
TKINDPYCKLRVNASTTKINNDEHTSSIKITLLKPLTNMLKNEPKCSVLNEQYNTWVSVS
CCCCCCEEEEEEECCEEECCCCCCCCEEEEEEEHHHHHHHCCCCCCEECCCCCCCEEEEH
TISKWEKLGDKLSRDYFKVINQPLPKLFAAIAEDAKQYSNYTEQIDFVTSSFNEKIQYIP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECC
GWRSTNGKFIPRDLIKVMNFEKGDCRDFIVSIAAILKNIGYKVYPALIRAGEIFTAPVLH
CEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCEEECHHHH
LPNFCSFDYIILKVIDKNDKIYWIDPCNSLSMANGIFPNIANRMALVLDPERSSYEQVSS
CCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCHHCCEEEEECCCCCCHHHHHC
IDPKHSQRIHNSTLEIEGNITNWKGSISYIGENSAILLHNKLLYMSQQQIKELFFNDISG
CCCHHHHHHCCCEEEEECCEECCCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHCCCC
IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNN
EEEECCCCCCEEECCCCCCCCCEEECCEEEEEECCCEEEEECCCCCEEEEECCHHHHHHH
IISVAPKQVGDLFIGAPHTNYNNLVIKNLKLKNIDYLNYVIDTPWIYVKRSCKHQGDDTE
HHHHCCHHHCCEEEECCCCCCCCEEEEEEEECCCEEEEEEECCCEEEEEHHCCCCCCCHH
IISKIVIRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVLTE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA