| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284243
Identifier: 148284243
GI number: 148284243
Start: 389801
End: 391729
Strand: Direct
Name: 148284243
Synonym: OTBS_0409
Alternate gene names: NA
Gene position: 389801-391729 (Clockwise)
Preceding gene: 148284242
Following gene: 148284244
Centisome position: 18.33
GC content: 28.36
Gene sequence:
>1929_bases ATGATATATAAAATCTTCAGAACTTTACTACAATTAGTATTATTAGTAATATTTATTAATCCCTCAAATGCAGAGTGGCA AAATTTAGATGATAGCACAATAGAAATCAAAGCATACAATCTAGATATAGCAATCGATAAAGATGGATCAGAGGAACATG CTGTTTATATGCATGCCAAAATTCTTAAAGAGCAAGGTCGTATGGTTTTTGCTAGCTATCGGTTACCATATTTATATAGA GAAAATATTGATACAATAAAAATATTAAAAGCTCAAACAATCTTAAATGGTAAAAAATATAATGTTTCTGCTGATTCTAT AGAAGATAAACCATTAGCTGCTACAGGTCTTGATAATGATATCTATAGACAGATATCATTAACTTTTCCTAAACTAGAAA TTGGAACAGAAATATTTCTAAAGTATAAGGTTACTTCTAAGTCTCCACTTGAAGGAGTCTATAGCGATATTTTAGGATTA TTACCATATGGCTATCATAAAAAAATGCAAATCAATATTAATTCGAAATTACCATTGGATACTAAAATTAATGATCCATA TTGCAAACTACGTGTTAATGCAAGTACTACAAAAATTAATAATGATGAACATACCAGTTCTATTAAAATAACATTACTGA AGCCATTGACTAACATGTTAAAAAATGAACCAAAATGTTCTGTTCTAAATGAACAATATAATACTTGGGTTTCTGTATCT ACTATTAGCAAATGGGAAAAATTAGGAGATAAATTAAGTAGGGATTACTTTAAAGTTATTAATCAACCACTGCCAAAACT ATTTGCTGCTATTGCTGAAGATGCAAAACAATATTCAAATTATACTGAACAAATTGATTTTGTTACTTCATCATTTAATG AAAAAATACAATATATTCCAGGCTGGCGTTCAACTAACGGCAAATTCATTCCTAGAGACTTAATTAAAGTTATGAACTTT GAAAAAGGAGATTGTAGAGACTTTATCGTTAGTATAGCTGCTATACTAAAAAATATAGGATATAAGGTGTATCCAGCTTT AATACGTGCAGGAGAAATCTTTACTGCTCCAGTATTACATCTTCCTAATTTTTGTAGTTTTGATTATATAATACTTAAAG TGATTGATAAAAATGACAAGATATACTGGATTGATCCTTGCAATAGTTTAAGCATGGCTAATGGAATATTCCCTAATATT GCTAATAGAATGGCATTAGTACTTGATCCAGAAAGATCAAGTTATGAACAAGTCTCAAGTATTGATCCAAAACATTCCCA AAGAATTCATAACAGTACTCTAGAAATAGAAGGTAATATAACTAATTGGAAAGGATCAATAAGTTATATAGGAGAAAACT CAGCTATTTTACTGCACAATAAATTGCTTTATATGTCTCAGCAACAAATTAAAGAATTATTTTTTAATGATATAAGTGGC ATTTATTTAGAAGAGCATAATAAGAAAAATATAACTTTACCAAGCGTTAATTTGAAGCTGCCAAGAATAGTTAAAGATGG AACTATTGAGTATGAATATAACACTGATTGCCAAATAAAGAAAACTAATGCAGGGCCTGTTTTATTTGCTTCTATAGGAT ATAACTCAGTTTTTAACAATATAATCAGTGTTGCTCCAAAACAAGTAGGTGATCTTTTTATAGGTGCACCTCATACAAAT TATAACAATCTTGTAATTAAGAATCTAAAACTTAAAAATATTGATTATCTTAACTACGTAATCGATACTCCATGGATTTA TGTTAAAAGATCATGCAAGCATCAAGGTGATGATACAGAAATCATATCTAAGATAGTTATACGACAGTCTTTAATACCAA ATAATGATTTAAAAAGTGATGTATATAAAAAGCTGAAGGATGATATTGAACAACACTTTAATAAAACTGCAATAGTTTTA ACTGAGTAA
Upstream 100 bases:
>100_bases ATTAAACAAAACTTTGAATCAACAGCAATAGTTTTTGATGATTCTAAAATGATGAAATAAAGATATACCATACTCTATAA AGTAGCTATTAAGGTAACTT
Downstream 100 bases:
>100_bases ATTATCAAAAAAACAAGCAAAGAAAGGAATATCTATTATAATAGTTCAATTTTTTATTACATTTAAAGTAAGAAAAATTG AATAAATTAATTGACATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSTIEIKAYNLDIAIDKDGSEEHAVYMHAKILKEQGRMVFASYRLPYLYR ENIDTIKILKAQTILNGKKYNVSADSIEDKPLAATGLDNDIYRQISLTFPKLEIGTEIFLKYKVTSKSPLEGVYSDILGL LPYGYHKKMQININSKLPLDTKINDPYCKLRVNASTTKINNDEHTSSIKITLLKPLTNMLKNEPKCSVLNEQYNTWVSVS TISKWEKLGDKLSRDYFKVINQPLPKLFAAIAEDAKQYSNYTEQIDFVTSSFNEKIQYIPGWRSTNGKFIPRDLIKVMNF EKGDCRDFIVSIAAILKNIGYKVYPALIRAGEIFTAPVLHLPNFCSFDYIILKVIDKNDKIYWIDPCNSLSMANGIFPNI ANRMALVLDPERSSYEQVSSIDPKHSQRIHNSTLEIEGNITNWKGSISYIGENSAILLHNKLLYMSQQQIKELFFNDISG IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNNIISVAPKQVGDLFIGAPHTN YNNLVIKNLKLKNIDYLNYVIDTPWIYVKRSCKHQGDDTEIISKIVIRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVL TE
Sequences:
>Translated_642_residues MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSTIEIKAYNLDIAIDKDGSEEHAVYMHAKILKEQGRMVFASYRLPYLYR ENIDTIKILKAQTILNGKKYNVSADSIEDKPLAATGLDNDIYRQISLTFPKLEIGTEIFLKYKVTSKSPLEGVYSDILGL LPYGYHKKMQININSKLPLDTKINDPYCKLRVNASTTKINNDEHTSSIKITLLKPLTNMLKNEPKCSVLNEQYNTWVSVS TISKWEKLGDKLSRDYFKVINQPLPKLFAAIAEDAKQYSNYTEQIDFVTSSFNEKIQYIPGWRSTNGKFIPRDLIKVMNF EKGDCRDFIVSIAAILKNIGYKVYPALIRAGEIFTAPVLHLPNFCSFDYIILKVIDKNDKIYWIDPCNSLSMANGIFPNI ANRMALVLDPERSSYEQVSSIDPKHSQRIHNSTLEIEGNITNWKGSISYIGENSAILLHNKLLYMSQQQIKELFFNDISG IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNNIISVAPKQVGDLFIGAPHTN YNNLVIKNLKLKNIDYLNYVIDTPWIYVKRSCKHQGDDTEIISKIVIRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVL TE >Mature_642_residues MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSTIEIKAYNLDIAIDKDGSEEHAVYMHAKILKEQGRMVFASYRLPYLYR ENIDTIKILKAQTILNGKKYNVSADSIEDKPLAATGLDNDIYRQISLTFPKLEIGTEIFLKYKVTSKSPLEGVYSDILGL LPYGYHKKMQININSKLPLDTKINDPYCKLRVNASTTKINNDEHTSSIKITLLKPLTNMLKNEPKCSVLNEQYNTWVSVS TISKWEKLGDKLSRDYFKVINQPLPKLFAAIAEDAKQYSNYTEQIDFVTSSFNEKIQYIPGWRSTNGKFIPRDLIKVMNF EKGDCRDFIVSIAAILKNIGYKVYPALIRAGEIFTAPVLHLPNFCSFDYIILKVIDKNDKIYWIDPCNSLSMANGIFPNI ANRMALVLDPERSSYEQVSSIDPKHSQRIHNSTLEIEGNITNWKGSISYIGENSAILLHNKLLYMSQQQIKELFFNDISG IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNNIISVAPKQVGDLFIGAPHTN YNNLVIKNLKLKNIDYLNYVIDTPWIYVKRSCKHQGDDTEIISKIVIRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVL TE
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73511; Mature: 73511
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSTIEIKAYNLDIAIDKDGSEEHAVYMHAK CHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEHHHH ILKEQGRMVFASYRLPYLYRENIDTIKILKAQTILNGKKYNVSADSIEDKPLAATGLDND HHHHCCCEEEEECCCCCHHHCCCCEEEEEEEHHHCCCCEEECCCCCCCCCCCEECCCCHH IYRQISLTFPKLEIGTEIFLKYKVTSKSPLEGVYSDILGLLPYGYHKKMQININSKLPLD HHHEEEEECCCEECCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC TKINDPYCKLRVNASTTKINNDEHTSSIKITLLKPLTNMLKNEPKCSVLNEQYNTWVSVS CCCCCCEEEEEEECCEEECCCCCCCCEEEEEEEHHHHHHHCCCCCCEECCCCCCCEEEEH TISKWEKLGDKLSRDYFKVINQPLPKLFAAIAEDAKQYSNYTEQIDFVTSSFNEKIQYIP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECC GWRSTNGKFIPRDLIKVMNFEKGDCRDFIVSIAAILKNIGYKVYPALIRAGEIFTAPVLH CEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCEEECHHHH LPNFCSFDYIILKVIDKNDKIYWIDPCNSLSMANGIFPNIANRMALVLDPERSSYEQVSS CCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCHHCCEEEEECCCCCCHHHHHC IDPKHSQRIHNSTLEIEGNITNWKGSISYIGENSAILLHNKLLYMSQQQIKELFFNDISG CCCHHHHHHCCCEEEEECCEECCCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHCCCC IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNN EEEECCCCCCEEECCCCCCCCCEEECCEEEEEECCCEEEEECCCCCEEEEECCHHHHHHH IISVAPKQVGDLFIGAPHTNYNNLVIKNLKLKNIDYLNYVIDTPWIYVKRSCKHQGDDTE HHHHCCHHHCCEEEECCCCCCCCEEEEEEEECCCEEEEEEECCCEEEEEHHCCCCCCCHH IISKIVIRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVLTE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC >Mature Secondary Structure MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSTIEIKAYNLDIAIDKDGSEEHAVYMHAK CHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEHHHH ILKEQGRMVFASYRLPYLYRENIDTIKILKAQTILNGKKYNVSADSIEDKPLAATGLDND HHHHCCCEEEEECCCCCHHHCCCCEEEEEEEHHHCCCCEEECCCCCCCCCCCEECCCCHH IYRQISLTFPKLEIGTEIFLKYKVTSKSPLEGVYSDILGLLPYGYHKKMQININSKLPLD HHHEEEEECCCEECCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC TKINDPYCKLRVNASTTKINNDEHTSSIKITLLKPLTNMLKNEPKCSVLNEQYNTWVSVS CCCCCCEEEEEEECCEEECCCCCCCCEEEEEEEHHHHHHHCCCCCCEECCCCCCCEEEEH TISKWEKLGDKLSRDYFKVINQPLPKLFAAIAEDAKQYSNYTEQIDFVTSSFNEKIQYIP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECC GWRSTNGKFIPRDLIKVMNFEKGDCRDFIVSIAAILKNIGYKVYPALIRAGEIFTAPVLH CEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCEEECHHHH LPNFCSFDYIILKVIDKNDKIYWIDPCNSLSMANGIFPNIANRMALVLDPERSSYEQVSS CCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCHHCCEEEEECCCCCCHHHHHC IDPKHSQRIHNSTLEIEGNITNWKGSISYIGENSAILLHNKLLYMSQQQIKELFFNDISG CCCHHHHHHCCCEEEEECCEECCCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHCCCC IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNN EEEECCCCCCEEECCCCCCCCCEEECCEEEEEECCCEEEEECCCCCEEEEECCHHHHHHH IISVAPKQVGDLFIGAPHTNYNNLVIKNLKLKNIDYLNYVIDTPWIYVKRSCKHQGDDTE HHHHCCHHHCCEEEECCCCCCCCEEEEEEEECCCEEEEEEECCCEEEEEHHCCCCCCCHH IISKIVIRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVLTE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA