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The map label for this gene is recA [H]

Identifier: 148284218

GI number: 148284218

Start: 362733

End: 363803

Strand: Direct

Name: recA [H]

Synonym: OTBS_0380

Alternate gene names: 148284218

Gene position: 362733-363803 (Clockwise)

Preceding gene: 148284217

Following gene: 148284219

Centisome position: 17.05

GC content: 34.64

Gene sequence:

>1071_bases
ATGTATAAAGAACACACATTAGATGATGTACTCAGTATAATTAATAAAACTCATGGCAAAGGCTCAATCATGAGATGCAA
TCAACGACCTATAGGCAAAGCACAAGTTATCTCCAGTGGATCGGTATGCATAGATACAGCCTTAGGAATAGGAGGATTCC
CTAAAGGAAGAGTCAGCGAAATCTATGGACCTGAAGCTTCAGGAAAAACAACAGTAGCACTTCATGCTGTAGCTGAGTGT
CAAAAAGGAGGAGAGAGTTGCGTTTATATTGATGCCGAGCATGCATTAGATCTACAATACGCTCAAAGATTGGGTGTAAA
TATTAATAGTCTAATTATATCACAGCCTGATACTGGCGAACAAGCTTTAGAAATTGCTGATACATTAGTTAGATCAGGAG
CAGTTGGATTAATAGTTGTAGATAGCGTTGCTGCTTTAGTACCAAAAGCAGAACTAGAAGGAGAAATAGGAGACCACAAT
ATAGGGCTACAAGCTAGATTAATGAGCCAAGCCTTACGAAAGCTCGTTGCCTCAGTCTCAAAAACTAATTGTACCATCAT
TTTCATCAATCAAATTAGAATGAAAATCGGTATTATGTTTGGCAGCCCAGAAACTACAACTGGAGGAAACGCTTTAAAGT
TTTATGCATCCATTAGAATGGAAATCAGAAAAGTTAGTCCTATTAAAGATAAAGAAGAAGTTATTGGTTATCAAACAAAA
GTTAAAATTGTTAAAAATAAACTTGCTCCACCTTTTAAAGTGGTTGATTTTGATATCATATATGGATTAGGCATTTCAAA
AGAAGGAGAACTAATAGATTTAGGAGTTAAGTTAGGTATTATTGAAAAAGCAGGCGCATGGTTTTCTTATAAAGATCATA
AAATTGGCCAAGGTAGAGAAAACGCTAAACAATATCTTAGAGAACATCCTTCAATTGCTCTAGAACTTGAACAACAAATC
AGACAAAAATCTGATATTATACAAAATAGCCTAGTTATCACTAATGAAAATGAACATGAAGCTAATCTAGATAATATATC
TATAGTAACAGAAGAAAAGACGAAGTGTTAA

Upstream 100 bases:

>100_bases
CAATAATTAAATACCAAGAAAATAATTTTAATAATTCAATAAATACTATTATAATTCTACTAACACTAAAATTTATTATT
TTTAAAAATCAGGAAATATC

Downstream 100 bases:

>100_bases
ATTTTACTAACCAACACGTACTTATTACAGGAGCATCAGGTAGCATAGGAAGAGCATGTAGTCAGTTATTTCATCAACTA
GGAGCTACAGTAATAATTTC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MYKEHTLDDVLSIINKTHGKGSIMRCNQRPIGKAQVISSGSVCIDTALGIGGFPKGRVSEIYGPEASGKTTVALHAVAEC
QKGGESCVYIDAEHALDLQYAQRLGVNINSLIISQPDTGEQALEIADTLVRSGAVGLIVVDSVAALVPKAELEGEIGDHN
IGLQARLMSQALRKLVASVSKTNCTIIFINQIRMKIGIMFGSPETTTGGNALKFYASIRMEIRKVSPIKDKEEVIGYQTK
VKIVKNKLAPPFKVVDFDIIYGLGISKEGELIDLGVKLGIIEKAGAWFSYKDHKIGQGRENAKQYLREHPSIALELEQQI
RQKSDIIQNSLVITNENEHEANLDNISIVTEEKTKC

Sequences:

>Translated_356_residues
MYKEHTLDDVLSIINKTHGKGSIMRCNQRPIGKAQVISSGSVCIDTALGIGGFPKGRVSEIYGPEASGKTTVALHAVAEC
QKGGESCVYIDAEHALDLQYAQRLGVNINSLIISQPDTGEQALEIADTLVRSGAVGLIVVDSVAALVPKAELEGEIGDHN
IGLQARLMSQALRKLVASVSKTNCTIIFINQIRMKIGIMFGSPETTTGGNALKFYASIRMEIRKVSPIKDKEEVIGYQTK
VKIVKNKLAPPFKVVDFDIIYGLGISKEGELIDLGVKLGIIEKAGAWFSYKDHKIGQGRENAKQYLREHPSIALELEQQI
RQKSDIIQNSLVITNENEHEANLDNISIVTEEKTKC
>Mature_356_residues
MYKEHTLDDVLSIINKTHGKGSIMRCNQRPIGKAQVISSGSVCIDTALGIGGFPKGRVSEIYGPEASGKTTVALHAVAEC
QKGGESCVYIDAEHALDLQYAQRLGVNINSLIISQPDTGEQALEIADTLVRSGAVGLIVVDSVAALVPKAELEGEIGDHN
IGLQARLMSQALRKLVASVSKTNCTIIFINQIRMKIGIMFGSPETTTGGNALKFYASIRMEIRKVSPIKDKEEVIGYQTK
VKIVKNKLAPPFKVVDFDIIYGLGISKEGELIDLGVKLGIIEKAGAWFSYKDHKIGQGRENAKQYLREHPSIALELEQQI
RQKSDIIQNSLVITNENEHEANLDNISIVTEEKTKC

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=335, Percent_Identity=57.6119402985075, Blast_Score=405, Evalue=1e-114,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38810; Mature: 38810

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKEHTLDDVLSIINKTHGKGSIMRCNQRPIGKAQVISSGSVCIDTALGIGGFPKGRVSE
CCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEECCCCEEEEECCCCCCCCCCCHHH
IYGPEASGKTTVALHAVAECQKGGESCVYIDAEHALDLQYAQRLGVNINSLIISQPDTGE
HCCCCCCCCEEEEHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHCCCCHHEEEECCCCCH
QALEIADTLVRSGAVGLIVVDSVAALVPKAELEGEIGDHNIGLQARLMSQALRKLVASVS
HHHHHHHHHHHCCCCEEEEECHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
KTNCTIIFINQIRMKIGIMFGSPETTTGGNALKFYASIRMEIRKVSPIKDKEEVIGYQTK
CCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHCCCCCCHHHHHCHHHH
VKIVKNKLAPPFKVVDFDIIYGLGISKEGELIDLGVKLGIIEKAGAWFSYKDHKIGQGRE
HHHHHHCCCCCEEEEEEEEEEECCCCCCCCEEEECEEEEEEECCCCEECCCCCCCCCCHH
NAKQYLREHPSIALELEQQIRQKSDIIQNSLVITNENEHEANLDNISIVTEEKTKC
HHHHHHHHCCCEEEHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MYKEHTLDDVLSIINKTHGKGSIMRCNQRPIGKAQVISSGSVCIDTALGIGGFPKGRVSE
CCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEECCCCEEEEECCCCCCCCCCCHHH
IYGPEASGKTTVALHAVAECQKGGESCVYIDAEHALDLQYAQRLGVNINSLIISQPDTGE
HCCCCCCCCEEEEHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHCCCCHHEEEECCCCCH
QALEIADTLVRSGAVGLIVVDSVAALVPKAELEGEIGDHNIGLQARLMSQALRKLVASVS
HHHHHHHHHHHCCCCEEEEECHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
KTNCTIIFINQIRMKIGIMFGSPETTTGGNALKFYASIRMEIRKVSPIKDKEEVIGYQTK
CCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHCCCCCCHHHHHCHHHH
VKIVKNKLAPPFKVVDFDIIYGLGISKEGELIDLGVKLGIIEKAGAWFSYKDHKIGQGRE
HHHHHHCCCCCEEEEEEEEEEECCCCCCCCEEEECEEEEEEECCCCEECCCCCCCCCCHH
NAKQYLREHPSIALELEQQIRQKSDIIQNSLVITNENEHEANLDNISIVTEEKTKC
HHHHHHHHCCCEEEHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA