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The map label for this gene is ank1C1 [C]

Identifier: 148284042

GI number: 148284042

Start: 95039

End: 95590

Strand: Direct

Name: ank1C1 [C]

Synonym: OTBS_0098

Alternate gene names: 148284042

Gene position: 95039-95590 (Clockwise)

Preceding gene: 148284036

Following gene: 148284045

Centisome position: 4.47

GC content: 32.43

Gene sequence:

>552_bases
ATGTCTGAATCTAAGGCTAAATATGCTTTACATCGCGCTATTAAAGATGGTGATATTGAAAAAGTGAAGCATCTTATTAA
TAATGATAGTACACTTGTCAATTCAAAATATAAAGACAGTATTACAGCTTTATCTGTTGCTTTAAAATATAAGAATCTAC
CTATTGCTAAGATTTTGCTGAACAATGGAGCTGACATCAATGCAAAAAATAATAGTGGACACACGGCTTTACATACAGCG
TTGCATATGTCTATTATTCCGAATGGTAGTAATTATAATGGTAAAAATATTGCAGATTCTGTCGGGATTTTAACACAGCA
TGAGACTAATAACCACAGTGTAAATGACGATATAAATGCAATTATCAAGTTTTTAGTAAAGAATGGCGCTAATACAAATG
TAAAAGACAATGTTGATCAAACTCCATTACATTGTACAGCAAATTCTTTTATTAACAACCTAGATATTGTACAGCTTCTA
CTTGATCACGATGCTGATCCCAATATGCAGAATGTGCATGGCCTAACTCCTTTACATCTTGTTGTTGTGTGA

Upstream 100 bases:

>100_bases
AATTCATGAATAATTATTTATCGTTCTATGCTTTGCTGCTAAGTAAAGCTGTACTGAAGATTATATTACAATAGTGATAG
TATAATTTTGGGAGTAAAAT

Downstream 100 bases:

>100_bases
GTAGACCTAACCAATTGCTTAATTAGGCCCCTCCTCAGAACCGGACTTGCAGAATTACCGCATCCGGCTCTCAAAAATAA
GATAAGCATTATGCCTTATT

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSESKAKYALHRAIKDGDIEKVKHLINNDSTLVNSKYKDSITALSVALKYKNLPIAKILLNNGADINAKNNSGHTALHTA
LHMSIIPNGSNYNGKNIADSVGILTQHETNNHSVNDDINAIIKFLVKNGANTNVKDNVDQTPLHCTANSFINNLDIVQLL
LDHDADPNMQNVHGLTPLHLVVV

Sequences:

>Translated_183_residues
MSESKAKYALHRAIKDGDIEKVKHLINNDSTLVNSKYKDSITALSVALKYKNLPIAKILLNNGADINAKNNSGHTALHTA
LHMSIIPNGSNYNGKNIADSVGILTQHETNNHSVNDDINAIIKFLVKNGANTNVKDNVDQTPLHCTANSFINNLDIVQLL
LDHDADPNMQNVHGLTPLHLVVV
>Mature_182_residues
SESKAKYALHRAIKDGDIEKVKHLINNDSTLVNSKYKDSITALSVALKYKNLPIAKILLNNGADINAKNNSGHTALHTAL
HMSIIPNGSNYNGKNIADSVGILTQHETNNHSVNDDINAIIKFLVKNGANTNVKDNVDQTPLHCTANSFINNLDIVQLLL
DHDADPNMQNVHGLTPLHLVVV

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI70780357, Length=147, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=4e-16,
Organism=Homo sapiens, GI70780359, Length=147, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=5e-16,
Organism=Homo sapiens, GI70780353, Length=147, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=5e-16,
Organism=Homo sapiens, GI215598574, Length=147, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=6e-16,
Organism=Homo sapiens, GI70780355, Length=147, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=6e-16,
Organism=Homo sapiens, GI32967601, Length=184, Percent_Identity=31.5217391304348, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI13376842, Length=181, Percent_Identity=31.4917127071823, Blast_Score=68, Evalue=4e-12,
Organism=Homo sapiens, GI52426735, Length=179, Percent_Identity=29.0502793296089, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI87239981, Length=174, Percent_Identity=31.0344827586207, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI52426737, Length=179, Percent_Identity=29.0502793296089, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI188595682, Length=179, Percent_Identity=29.0502793296089, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI68131557, Length=186, Percent_Identity=27.4193548387097, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI4506217, Length=173, Percent_Identity=28.9017341040462, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI24233530, Length=184, Percent_Identity=29.8913043478261, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71981414, Length=181, Percent_Identity=32.5966850828729, Blast_Score=82, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71981411, Length=180, Percent_Identity=32.2222222222222, Blast_Score=81, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71981389, Length=180, Percent_Identity=32.2222222222222, Blast_Score=80, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI25145251, Length=180, Percent_Identity=32.2222222222222, Blast_Score=79, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17542700, Length=180, Percent_Identity=32.2222222222222, Blast_Score=79, Evalue=9e-16,
Organism=Drosophila melanogaster, GI161082096, Length=180, Percent_Identity=30.5555555555556, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI161082081, Length=180, Percent_Identity=30.5555555555556, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI161082106, Length=180, Percent_Identity=30.5555555555556, Blast_Score=77, Evalue=5e-15,
Organism=Drosophila melanogaster, GI161082110, Length=180, Percent_Identity=30.5555555555556, Blast_Score=77, Evalue=5e-15,
Organism=Drosophila melanogaster, GI161082085, Length=180, Percent_Identity=30.5555555555556, Blast_Score=77, Evalue=6e-15,
Organism=Drosophila melanogaster, GI161082099, Length=180, Percent_Identity=30.5555555555556, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI161082089, Length=180, Percent_Identity=30.5555555555556, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI161082092, Length=175, Percent_Identity=32, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24650843, Length=176, Percent_Identity=28.9772727272727, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281359521, Length=184, Percent_Identity=28.804347826087, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281359519, Length=184, Percent_Identity=28.804347826087, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28558752, Length=184, Percent_Identity=28.804347826087, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28558750, Length=184, Percent_Identity=28.804347826087, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28558756, Length=184, Percent_Identity=28.804347826087, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28558754, Length=184, Percent_Identity=28.804347826087, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 19954; Mature: 19823

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESKAKYALHRAIKDGDIEKVKHLINNDSTLVNSKYKDSITALSVALKYKNLPIAKILL
CCCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEEE
NNGADINAKNNSGHTALHTALHMSIIPNGSNYNGKNIADSVGILTQHETNNHSVNDDINA
CCCCCCCCCCCCCCHHHHHEEEEEEECCCCCCCCCCHHHHHCEEEECCCCCCCCCHHHHH
IIKFLVKNGANTNVKDNVDQTPLHCTANSFINNLDIVQLLLDHDADPNMQNVHGLTPLHL
HHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCEEE
VVV
EEC
>Mature Secondary Structure 
SESKAKYALHRAIKDGDIEKVKHLINNDSTLVNSKYKDSITALSVALKYKNLPIAKILL
CCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEEE
NNGADINAKNNSGHTALHTALHMSIIPNGSNYNGKNIADSVGILTQHETNNHSVNDDINA
CCCCCCCCCCCCCCHHHHHEEEEEEECCCCCCCCCCHHHHHCEEEECCCCCCCCCHHHHH
IIKFLVKNGANTNVKDNVDQTPLHCTANSFINNLDIVQLLLDHDADPNMQNVHGLTPLHL
HHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCEEE
VVV
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA