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The map label for this gene is traN [H]

Identifier: 148284045

GI number: 148284045

Start: 107369

End: 107875

Strand: Direct

Name: traN [H]

Synonym: OTBS_0108

Alternate gene names: 148284045

Gene position: 107369-107875 (Clockwise)

Preceding gene: 148284042

Following gene: 148284046

Centisome position: 5.05

GC content: 35.11

Gene sequence:

>507_bases
ATGAGCAAGGACATTAAAACAAATCCCGTTTCTGTATTTTCAGGTAAACATCGAAAATGCAAAAAAGATGTATTTAGTTT
TTTGAATTGCTGCTCTTCAATGACTGGCTGGGGGCGTGATATAGGCTTATCGCAATGCAAATCTAAGGAACAAGAATTAG
CTCTATATAGAAAAAAAGGTTACTGCTATTACATTGGAACCTATTGTTCTTCAAGAATTCCGATATTGGGTATTTGCCTA
GCTAGAAAGTCTACTTATTGCTGCTTTCAGTCAAAACTTGCAAGAATTTTTCAGGAAGAAGCAAGAAAGCAGCTAAAAAT
AGACTTCGGTACACCTGAATGTCCAAAGTGTAGAGGCCTTACTGTTGAAGAGTTACAAAAAGTTGATTTCACTAAAATCA
ATATGGATGAACTATTTGGAGATATACTCACTAAGGCTCAAAACAGCATGAACAAAGACATTATTGCAGGAATCAAAGAT
AAAGTTCATCGTATGCAACAAACTTAG

Upstream 100 bases:

>100_bases
AACTACGTTAACCAGTTTCGAAAGAAGTCTATTGCATTAAATATGCGTGATTTTCTATAAGTAAAGGCATTGATATAAAG
TCAATAGGAACTAGCTTCAG

Downstream 100 bases:

>100_bases
TCTAAATGAGCAGATTATTAATGTTTATGATATTAATTAGTCATTTATCCACTGTTGATGCTTCACCAACAAGATTTTTA
TGGTACAATGATAAACATGG

Product: conjugative transfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICL
ARKSTYCCFQSKLARIFQEEARKQLKIDFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKD
KVHRMQQT

Sequences:

>Translated_168_residues
MSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICL
ARKSTYCCFQSKLARIFQEEARKQLKIDFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKD
KVHRMQQT
>Mature_167_residues
SKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLA
RKSTYCCFQSKLARIFQEEARKQLKIDFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDK
VHRMQQT

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 19224; Mature: 19092

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKG
CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCC
YCYYIGTYCSSRIPILGICLARKSTYCCFQSKLARIFQEEARKQLKIDFGTPECPKCRGL
CEEEEECHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC
TVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQT
CHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKG
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCC
YCYYIGTYCSSRIPILGICLARKSTYCCFQSKLARIFQEEARKQLKIDFGTPECPKCRGL
CEEEEECHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC
TVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQT
CHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]