| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is rhp2
Identifier: 148284005
GI number: 148284005
Start: 10369
End: 12168
Strand: Direct
Name: rhp2
Synonym: OTBS_0009
Alternate gene names: NA
Gene position: 10369-12168 (Clockwise)
Preceding gene: 148284004
Following gene: 148284012
Centisome position: 0.49
GC content: 29.11
Gene sequence:
>1800_bases ATGCTTAAAGATAGAATTACAAAAAGTATATTAGCAACGAAGTTATTTAAAACATTAATAGCTTCTAATCAATCTAAATT TACAGAAGAAGATATTTTATTGTTAAGTGAAAATCTTATAAAAACCTTAAGCAGCATTTCTGAAAAAAATAGTATGGCAA GTATAGAAGAATACCAAAAATGTCTTTCTGATTTAGATGATCGAGACTTAAGCAAAGTATTGAAAGTATTACAGGATATT TTTGCAGGGGAGGAGCATAAAGAATTCAGAAAAATTATTGAGTTACCACTTTTAGATAGACTAACTACACAATTTAAAAT AGAACGTATACAAGAATTAAATAATCAACAAACAGGAAATTTTAATAAAAACTTAAGCAATAACAATATTGAGGAGCTGC TGCGTGATAAAAACATTGCTAAACAAGGAGATTTTTCTCCTAAAAGCCCTAAACAAGCTGGGGTTTCTGCAGGATATATT GCTACTGAAAAGTCTAGTGGTAATACTTTTCTTCTAAAGCAGTTTTATAAAAGCAATGCTAGTGCCAAAAAAATCTCAAG AAGTATTTTATGTTGTATAAATTCACAGAAATTAAACCAAGCTCAAAGTGATATGATAGATGCTATGCAAGAATTACTAG CATCACAGATGTATCAATTATTATTATATGATCGAGCTCCTAAAGAAGCGTTAACAATACCAGATAAATTGAATTCAGAT TCTCTTTATATACGATCTAAGTTTCTTAAGAACGCAGTAACACTTTCTGAGTTATCTGGTTTAAAAGATGTTACTTGGGT TGATCCAAGCGCTAGATGTCTAAAACAATTAGAAGGATTTGAAAAAGTAATTGCTGCTTGCCATGTATTAGGAGATATAG ATTATCATGCTGCTAATTTAATAGTACTTGATGGTAAAACTGTGGCTAAAATAGATCATGGCAGATCATTTATGGAATTT TATAAAGATTTTGCAAATATGGTTAACTCAACATATAAAAGATTTAAAAGCAGAGGTAAAAATTATGCTTTAGCAATTCA ATATGGTAATTTGTGCTTTGATATTGGCAAATATAATACTGCATTAAGACAAATGATAGATCAATTGAATGAAGAGCAGA TAGAGATTATAATAGGGCAAAAAGCTGCTGAGCTAAGAAAGTTAGGATTTAATCCAAATGACTTAATTGTACAAGCGGGC TTTGGAAGTGATATAGTTAATAGTACTGTCATAAGTGACTACAAAGATCTTGAAAATTTTTATAAAGAAAATCTGAAAAA AAGCCTTCAAAATATGAAAGAAATAGCTAAAGCAACAAATATAGTAGCCAAGTTTAGCAGTGTATCTCAAAAGTTTAAAG AAGGAGGATGGTTAGAAGCTTTTGCTACTTCTAGAATACAAGATCCAGTGTTATATGCACATAATACTAATATTGCAATT GATCAAAAAAGTGCCTTAGAATGGGCTATTACTAATAATTATGAGATTAAACATTATGACAGTAATATATACTCTAATTG GCAACAAGAATGGCTAAAAAGTAATTATGATAAATTGCAAAAAATAAACCAGTGTATTTTGACGCAAGAAAAAAAAATAG TTGAATTTAATGCTGCAGATCGTATTATAGAAAGCGAAAATCATCAAAAAAGTTTAAATAATAAAATTGATTTTTTATCA AGTAGTAAGGAAGTATTACTAAAGTCTAAAGTCAAGCATCAGTTTGATATTAACCAAAAAAAAGAACCTGCAGTATTTAA GCTCAAACCTAAAACTTCACAAGGAAGGAGCATGGTTTGA
Upstream 100 bases:
>100_bases ATAGCTTATTCGAAGGTTTATATATTCTCTTTTTTTCAGTAACTAAATTTAGAAAATTTAAATATATATGCAAAGATATA TTGATTAATGAGGGCTTTAA
Downstream 100 bases:
>100_bases CTATATAGTCTAACTCATCAAATGTATCAATTTATAGATTATCTTGTCTATTAACGTCAGTTTAGGATAAGAAAAAGTAT GAAAGGCATAATACAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 599; Mature: 599
Protein sequence:
>599_residues MLKDRITKSILATKLFKTLIASNQSKFTEEDILLLSENLIKTLSSISEKNSMASIEEYQKCLSDLDDRDLSKVLKVLQDI FAGEEHKEFRKIIELPLLDRLTTQFKIERIQELNNQQTGNFNKNLSNNNIEELLRDKNIAKQGDFSPKSPKQAGVSAGYI ATEKSSGNTFLLKQFYKSNASAKKISRSILCCINSQKLNQAQSDMIDAMQELLASQMYQLLLYDRAPKEALTIPDKLNSD SLYIRSKFLKNAVTLSELSGLKDVTWVDPSARCLKQLEGFEKVIAACHVLGDIDYHAANLIVLDGKTVAKIDHGRSFMEF YKDFANMVNSTYKRFKSRGKNYALAIQYGNLCFDIGKYNTALRQMIDQLNEEQIEIIIGQKAAELRKLGFNPNDLIVQAG FGSDIVNSTVISDYKDLENFYKENLKKSLQNMKEIAKATNIVAKFSSVSQKFKEGGWLEAFATSRIQDPVLYAHNTNIAI DQKSALEWAITNNYEIKHYDSNIYSNWQQEWLKSNYDKLQKINQCILTQEKKIVEFNAADRIIESENHQKSLNNKIDFLS SSKEVLLKSKVKHQFDINQKKEPAVFKLKPKTSQGRSMV
Sequences:
>Translated_599_residues MLKDRITKSILATKLFKTLIASNQSKFTEEDILLLSENLIKTLSSISEKNSMASIEEYQKCLSDLDDRDLSKVLKVLQDI FAGEEHKEFRKIIELPLLDRLTTQFKIERIQELNNQQTGNFNKNLSNNNIEELLRDKNIAKQGDFSPKSPKQAGVSAGYI ATEKSSGNTFLLKQFYKSNASAKKISRSILCCINSQKLNQAQSDMIDAMQELLASQMYQLLLYDRAPKEALTIPDKLNSD SLYIRSKFLKNAVTLSELSGLKDVTWVDPSARCLKQLEGFEKVIAACHVLGDIDYHAANLIVLDGKTVAKIDHGRSFMEF YKDFANMVNSTYKRFKSRGKNYALAIQYGNLCFDIGKYNTALRQMIDQLNEEQIEIIIGQKAAELRKLGFNPNDLIVQAG FGSDIVNSTVISDYKDLENFYKENLKKSLQNMKEIAKATNIVAKFSSVSQKFKEGGWLEAFATSRIQDPVLYAHNTNIAI DQKSALEWAITNNYEIKHYDSNIYSNWQQEWLKSNYDKLQKINQCILTQEKKIVEFNAADRIIESENHQKSLNNKIDFLS SSKEVLLKSKVKHQFDINQKKEPAVFKLKPKTSQGRSMV >Mature_599_residues MLKDRITKSILATKLFKTLIASNQSKFTEEDILLLSENLIKTLSSISEKNSMASIEEYQKCLSDLDDRDLSKVLKVLQDI FAGEEHKEFRKIIELPLLDRLTTQFKIERIQELNNQQTGNFNKNLSNNNIEELLRDKNIAKQGDFSPKSPKQAGVSAGYI ATEKSSGNTFLLKQFYKSNASAKKISRSILCCINSQKLNQAQSDMIDAMQELLASQMYQLLLYDRAPKEALTIPDKLNSD SLYIRSKFLKNAVTLSELSGLKDVTWVDPSARCLKQLEGFEKVIAACHVLGDIDYHAANLIVLDGKTVAKIDHGRSFMEF YKDFANMVNSTYKRFKSRGKNYALAIQYGNLCFDIGKYNTALRQMIDQLNEEQIEIIIGQKAAELRKLGFNPNDLIVQAG FGSDIVNSTVISDYKDLENFYKENLKKSLQNMKEIAKATNIVAKFSSVSQKFKEGGWLEAFATSRIQDPVLYAHNTNIAI DQKSALEWAITNNYEIKHYDSNIYSNWQQEWLKSNYDKLQKINQCILTQEKKIVEFNAADRIIESENHQKSLNNKIDFLS SSKEVLLKSKVKHQFDINQKKEPAVFKLKPKTSQGRSMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68323; Mature: 68323
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKDRITKSILATKLFKTLIASNQSKFTEEDILLLSENLIKTLSSISEKNSMASIEEYQK CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLSDLDDRDLSKVLKVLQDIFAGEEHKEFRKIIELPLLDRLTTQFKIERIQELNNQQTGN HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FNKNLSNNNIEELLRDKNIAKQGDFSPKSPKQAGVSAGYIATEKSSGNTFLLKQFYKSNA CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHCCC SAKKISRSILCCINSQKLNQAQSDMIDAMQELLASQMYQLLLYDRAPKEALTIPDKLNSD HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SLYIRSKFLKNAVTLSELSGLKDVTWVDPSARCLKQLEGFEKVIAACHVLGDIDYHAANL CHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IVLDGKTVAKIDHGRSFMEFYKDFANMVNSTYKRFKSRGKNYALAIQYGNLCFDIGKYNT EEECCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEHHHHHH ALRQMIDQLNEEQIEIIIGQKAAELRKLGFNPNDLIVQAGFGSDIVNSTVISDYKDLENF HHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH YKENLKKSLQNMKEIAKATNIVAKFSSVSQKFKEGGWLEAFATSRIQDPVLYAHNTNIAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCEEE DQKSALEWAITNNYEIKHYDSNIYSNWQQEWLKSNYDKLQKINQCILTQEKKIVEFNAAD ECCCCEEEEECCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHEEECHHH RIIESENHQKSLNNKIDFLSSSKEVLLKSKVKHQFDINQKKEPAVFKLKPKTSQGRSMV HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MLKDRITKSILATKLFKTLIASNQSKFTEEDILLLSENLIKTLSSISEKNSMASIEEYQK CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLSDLDDRDLSKVLKVLQDIFAGEEHKEFRKIIELPLLDRLTTQFKIERIQELNNQQTGN HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FNKNLSNNNIEELLRDKNIAKQGDFSPKSPKQAGVSAGYIATEKSSGNTFLLKQFYKSNA CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHCCC SAKKISRSILCCINSQKLNQAQSDMIDAMQELLASQMYQLLLYDRAPKEALTIPDKLNSD HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SLYIRSKFLKNAVTLSELSGLKDVTWVDPSARCLKQLEGFEKVIAACHVLGDIDYHAANL CHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IVLDGKTVAKIDHGRSFMEFYKDFANMVNSTYKRFKSRGKNYALAIQYGNLCFDIGKYNT EEECCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEHHHHHH ALRQMIDQLNEEQIEIIIGQKAAELRKLGFNPNDLIVQAGFGSDIVNSTVISDYKDLENF HHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH YKENLKKSLQNMKEIAKATNIVAKFSSVSQKFKEGGWLEAFATSRIQDPVLYAHNTNIAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCEEE DQKSALEWAITNNYEIKHYDSNIYSNWQQEWLKSNYDKLQKINQCILTQEKKIVEFNAAD ECCCCEEEEECCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHEEECHHH RIIESENHQKSLNNKIDFLSSSKEVLLKSKVKHQFDINQKKEPAVFKLKPKTSQGRSMV HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]