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The map label for this gene is panD

Identifier: 148269028

GI number: 148269028

Start: 2770592

End: 2770975

Strand: Reverse

Name: panD

Synonym: SaurJH9_2619

Alternate gene names: 148269028

Gene position: 2770975-2770592 (Counterclockwise)

Preceding gene: 148269029

Following gene: 148269027

Centisome position: 95.33

GC content: 32.81

Gene sequence:

>384_bases
GTGATAAGAACAATGATGAATGCTAAAATTCATAGAGCAAGAGTGACTGAGTCAAATTTAAATTATGTAGGTAGTATTAC
GATTGATTCAGATATTTTGGAAGCGGTAGACATCTTGCCAAATGAAAAAGTAGCCATCGTGAATAATAATAATGGTGCAC
GTTTTGAAACATACGTAATAGCTGGTGAAAGAGGTAGTGGTAAAATTTGTTTGAACGGTGCAGCATCAAGACTTGTTGAA
GTAGGCGATGTAGTCATAATCATGACTTATGCACAGTTAAATGAAGAAGAAATTAAAAACCATGCTCCTAAAGTAGCAGT
AATGAATGAAGACAATGTCATTATTGAAATGATTCATGAAAAAGAAAATACGATAGTGTTATAA

Upstream 100 bases:

>100_bases
GTAGAACAACACGAAATAACTGGACGCATATTTATCTCGTTAGCTGTCAAATTTTCAAAAGCGCGTTTAATAGATAATAT
AATAATTGGAGCTGAATAAA

Downstream 100 bases:

>100_bases
AATAGTATAAGTTAGAAACCTCTAGTAGATAACAATGTAGTTATCCATTAGGGGTTTTTATTTTTATGCCAATTGGGTTA
GCGTAATAGAAGTAAAGGTA

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MIRTMMNAKIHRARVTESNLNYVGSITIDSDILEAVDILPNEKVAIVNNNNGARFETYVIAGERGSGKICLNGAASRLVE
VGDVVIIMTYAQLNEEEIKNHAPKVAVMNEDNVIIEMIHEKENTIVL

Sequences:

>Translated_127_residues
MIRTMMNAKIHRARVTESNLNYVGSITIDSDILEAVDILPNEKVAIVNNNNGARFETYVIAGERGSGKICLNGAASRLVE
VGDVVIIMTYAQLNEEEIKNHAPKVAVMNEDNVIIEMIHEKENTIVL
>Mature_127_residues
MIRTMMNAKIHRARVTESNLNYVGSITIDSDILEAVDILPNEKVAIVNNNNGARFETYVIAGERGSGKICLNGAASRLVE
VGDVVIIMTYAQLNEEEIKNHAPKVAVMNEDNVIIEMIHEKENTIVL

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=112, Percent_Identity=49.1071428571429, Blast_Score=114, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_STAA2 (A6U4X7)

Other databases:

- EMBL:   CP000736
- RefSeq:   YP_001317782.1
- ProteinModelPortal:   A6U4X7
- SMR:   A6U4X7
- STRING:   A6U4X7
- EnsemblBacteria:   EBSTAT00000015673
- GeneID:   5315756
- GenomeReviews:   CP000736_GR
- KEGG:   sah:SaurJH1_2673
- eggNOG:   COG0853
- GeneTree:   EBGT00050000024603
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- ProtClustDB:   PRK05449
- BioCyc:   SAUR359787:SAURJH1_2673-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 14050; Mature: 14050

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTMMNAKIHRARVTESNLNYVGSITIDSDILEAVDILPNEKVAIVNNNNGARFETYVI
CCCCCCCCEEEEEEECCCCCCEEEEEEECHHHHHHHHCCCCCEEEEEECCCCCEEEEEEE
AGERGSGKICLNGAASRLVEVGDVVIIMTYAQLNEEEIKNHAPKVAVMNEDNVIIEMIHE
ECCCCCCEEEECCCHHHHEECCCEEEEEEECCCCHHHHHCCCCEEEEEECCCEEEEEEEC
KENTIVL
CCCEEEC
>Mature Secondary Structure
MIRTMMNAKIHRARVTESNLNYVGSITIDSDILEAVDILPNEKVAIVNNNNGARFETYVI
CCCCCCCCEEEEEEECCCCCCEEEEEEECHHHHHHHHCCCCCEEEEEECCCCCEEEEEEE
AGERGSGKICLNGAASRLVEVGDVVIIMTYAQLNEEEIKNHAPKVAVMNEDNVIIEMIHE
ECCCCCCEEEECCCHHHHEECCCEEEEEEECCCCHHHHHCCCCEEEEEECCCEEEEEEEC
KENTIVL
CCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA