| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148261230
Identifier: 148261230
GI number: 148261230
Start: 2476217
End: 2476780
Strand: Reverse
Name: 148261230
Synonym: Acry_2243
Alternate gene names: NA
Gene position: 2476780-2476217 (Counterclockwise)
Preceding gene: 148261231
Following gene: 148261226
Centisome position: 73.08
GC content: 62.59
Gene sequence:
>564_bases ATGAAACTCAGCCATCTGGCCCTGGGCAGCGCGCTTGCCCTCGCCGCCTGCGGCGCGGCCTTCGCCGCGATGACGAACGA TTCGGTGATGGTCGGCGGCGCGCCGATGTATCCCACCCGGAACATCGTGCAGAATGCCGTGAACTCGAAGGACAACACGA CGCTGGTGGCCGCCGTGAAGGCCGCCGGCCTCGTGAAGGCGCTCGAGGGCAAGGGGCCGTTCACCGTTTTCGCGCCGACC AACGAGGCTTTCGACATGCTGCCGAAAGGTACGGTCGCCACGCTTCTCGAGCCGAAGAACAAGGCGGAACTCACCTCGAT CCTGCTTTATCACGTCGTCCCTGGTGACTTCACCTTCGACACCCTGCGCGCCGACATCGAAGGCCATGGCGGCATGGTGA AACTGCCGACCCTCGACAAGGGGCACGACCTCACCTTCCGGATGAACGGCCCGCACAATATCGAGGTCGTCGATGGCAAG GGCAATGTGGCGCAGATCGAGACATACGACGTCAATCAGTCGAACGGCGTCATTCAGGTGATCGACCGTGTTCTGATGCC CTGA
Upstream 100 bases:
>100_bases TGACCGAGGAAATCTTTCCGCAACTCATCCGTTTGAATGCCCGCTGCGTAACCGGGGCATGAGATCGCCGCCGGCGATCG AGCAGAGGAGATGACGGACC
Downstream 100 bases:
>100_bases ACCGGGTTTCCCGCGATCCGGCGGGGCCCCGCCCGGCCGGAATTCGAGCCAGCGGCATGCACGCCGCTGGCTCTTTTTTG ATGCGGAACGCATCCGGATG
Product: beta-Ig-H3/fasciclin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKLSHLALGSALALAACGAAFAAMTNDSVMVGGAPMYPTRNIVQNAVNSKDNTTLVAAVKAAGLVKALEGKGPFTVFAPT NEAFDMLPKGTVATLLEPKNKAELTSILLYHVVPGDFTFDTLRADIEGHGGMVKLPTLDKGHDLTFRMNGPHNIEVVDGK GNVAQIETYDVNQSNGVIQVIDRVLMP
Sequences:
>Translated_187_residues MKLSHLALGSALALAACGAAFAAMTNDSVMVGGAPMYPTRNIVQNAVNSKDNTTLVAAVKAAGLVKALEGKGPFTVFAPT NEAFDMLPKGTVATLLEPKNKAELTSILLYHVVPGDFTFDTLRADIEGHGGMVKLPTLDKGHDLTFRMNGPHNIEVVDGK GNVAQIETYDVNQSNGVIQVIDRVLMP >Mature_187_residues MKLSHLALGSALALAACGAAFAAMTNDSVMVGGAPMYPTRNIVQNAVNSKDNTTLVAAVKAAGLVKALEGKGPFTVFAPT NEAFDMLPKGTVATLLEPKNKAELTSILLYHVVPGDFTFDTLRADIEGHGGMVKLPTLDKGHDLTFRMNGPHNIEVVDGK GNVAQIETYDVNQSNGVIQVIDRVLMP
Specific function: Unknown
COG id: COG2335
COG function: function code M; Secreted and surface protein containing fasciclin-like repeats
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAS1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000782 [H]
Pfam domain/function: PF02469 Fasciclin [H]
EC number: NA
Molecular weight: Translated: 19731; Mature: 19731
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50213 FAS1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSHLALGSALALAACGAAFAAMTNDSVMVGGAPMYPTRNIVQNAVNSKDNTTLVAAVK CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEH AAGLVKALEGKGPFTVFAPTNEAFDMLPKGTVATLLEPKNKAELTSILLYHVVPGDFTFD HHHHHHHHCCCCCEEEECCCCHHHHHCCCCCEEEEECCCCHHHHHHEEEEEECCCCCCHH TLRADIEGHGGMVKLPTLDKGHDLTFRMNGPHNIEVVDGKGNVAQIETYDVNQSNGVIQV HEEEEECCCCCEEECCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCHHHH IDRVLMP HHHHHCC >Mature Secondary Structure MKLSHLALGSALALAACGAAFAAMTNDSVMVGGAPMYPTRNIVQNAVNSKDNTTLVAAVK CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEH AAGLVKALEGKGPFTVFAPTNEAFDMLPKGTVATLLEPKNKAELTSILLYHVVPGDFTFD HHHHHHHHCCCCCEEEECCCCHHHHHCCCCCEEEEECCCCHHHHHHEEEEEECCCCCCHH TLRADIEGHGGMVKLPTLDKGHDLTFRMNGPHNIEVVDGKGNVAQIETYDVNQSNGVIQV HEEEEECCCCCEEECCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCHHHH IDRVLMP HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]