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The map label for this gene is ytfQ [H]

Identifier: 148261226

GI number: 148261226

Start: 2470665

End: 2471696

Strand: Reverse

Name: ytfQ [H]

Synonym: Acry_2239

Alternate gene names: 148261226

Gene position: 2471696-2470665 (Counterclockwise)

Preceding gene: 148261230

Following gene: 148261225

Centisome position: 72.93

GC content: 64.63

Gene sequence:

>1032_bases
ATGAAGACCAGAACGATATTGCTTGCGGCCACGTGCATCGGCGCTGCCATGCTGACGGTCGCATCCGCACAGGCGGCGAA
GCAGACTGCCGCGCAGATGATCCTGGGAACGTCGAAGGCGGTGTGTGTGAACCCGCACCCGAGCCACGCGAAGCTGTCGA
GCCTCGTGGTCGGCTTCTCCCAGTCGCAGGGCAACCAGAACCCGTTCCGCGCCGAAGAGACGCGGTCGCTGCGGGAAGCC
GCGCATCAGGTGCACGCGAAGCGCTACATCTACACCAACGCGCATTCCAACGAGGCGAAGCAGGTCGCCGATGTCGAGAG
CATGATCAACCAGGGCGCGCAGGCCCTGGTCATCGCGCCGCTCAACTCGACCGGGCTGCAGCCGGCCTTCGCCCAGGCGG
TCGCGAAACATATCCCGATCATCACGATCGACCGCGAGACGGCCGGAACCCATTGCTCCGACTTCCTGAGCTTCGTCGGG
TCGGATTTCTACAACCAGGGTGTGATCGACGGCCGCGAACTGGCCAAGGCGACGGGCGGGCACGCCGTGATCGCCGAGAT
CCAGGGCGCCTACGGCAATTCGGTGGAAACCGCGAGAACCAAGGGCTTCGCCGCCGCGATATCGAAATATCCCGGCATGA
AGGTCATCGCCGCGCAGACCGGCAACTGGTCGACGACCGACGCGCAGAAGGTGGTCAGCCAGATTCTGCTCGCGCATCCC
GATGTCAACGCGATCTACACGCAGAGCGACACGATGGCCTACGGCGCCATCACCGCCCTGCGCGACGCCGGCAAGAAGCC
GGGGCAGGTCAAGATCGTGACCATCGACGGCACCAAGCAGGGCGTGCAGGACATCGTCTCCGGCTGGATCTATGCCGATG
ACGAGACCAATCCGCGCTTCGGGCCGATCGCCATGCACGAGATCCAGAACTGGCTCGACGGCAAGCCGGTGCCGCAGAAG
ATCACGATCCGCGATCATCTCTACACGCCCGCCAATGCCAAGGCGGCGCTGGCCAGCGGCGTTCCCTACTGA

Upstream 100 bases:

>100_bases
GTAACAGCCCGCTTAGCATGAATATAGAACTAAGTTCCATTATACGGAACTACAACGGCCAACCGGCCCGATAACGCCGA
AGAGAGCGAATGGAGGGGAC

Downstream 100 bases:

>100_bases
CGCCCATGTCTGTGCCGGTTCTTGAAACGGTCGCCGTTTCAAGGCGTTTCGGTGCGGTGCGGGCGTTGGAGGGGGTGTCG
CTGACGCTCAATGCCGGCGA

Product: periplasmic binding protein/LacI transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKTRTILLAATCIGAAMLTVASAQAAKQTAAQMILGTSKAVCVNPHPSHAKLSSLVVGFSQSQGNQNPFRAEETRSLREA
AHQVHAKRYIYTNAHSNEAKQVADVESMINQGAQALVIAPLNSTGLQPAFAQAVAKHIPIITIDRETAGTHCSDFLSFVG
SDFYNQGVIDGRELAKATGGHAVIAEIQGAYGNSVETARTKGFAAAISKYPGMKVIAAQTGNWSTTDAQKVVSQILLAHP
DVNAIYTQSDTMAYGAITALRDAGKKPGQVKIVTIDGTKQGVQDIVSGWIYADDETNPRFGPIAMHEIQNWLDGKPVPQK
ITIRDHLYTPANAKAALASGVPY

Sequences:

>Translated_343_residues
MKTRTILLAATCIGAAMLTVASAQAAKQTAAQMILGTSKAVCVNPHPSHAKLSSLVVGFSQSQGNQNPFRAEETRSLREA
AHQVHAKRYIYTNAHSNEAKQVADVESMINQGAQALVIAPLNSTGLQPAFAQAVAKHIPIITIDRETAGTHCSDFLSFVG
SDFYNQGVIDGRELAKATGGHAVIAEIQGAYGNSVETARTKGFAAAISKYPGMKVIAAQTGNWSTTDAQKVVSQILLAHP
DVNAIYTQSDTMAYGAITALRDAGKKPGQVKIVTIDGTKQGVQDIVSGWIYADDETNPRFGPIAMHEIQNWLDGKPVPQK
ITIRDHLYTPANAKAALASGVPY
>Mature_343_residues
MKTRTILLAATCIGAAMLTVASAQAAKQTAAQMILGTSKAVCVNPHPSHAKLSSLVVGFSQSQGNQNPFRAEETRSLREA
AHQVHAKRYIYTNAHSNEAKQVADVESMINQGAQALVIAPLNSTGLQPAFAQAVAKHIPIITIDRETAGTHCSDFLSFVG
SDFYNQGVIDGRELAKATGGHAVIAEIQGAYGNSVETARTKGFAAAISKYPGMKVIAAQTGNWSTTDAQKVVSQILLAHP
DVNAIYTQSDTMAYGAITALRDAGKKPGQVKIVTIDGTKQGVQDIVSGWIYADDETNPRFGPIAMHEIQNWLDGKPVPQK
ITIRDHLYTPANAKAALASGVPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790674, Length=290, Percent_Identity=30.6896551724138, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1790192, Length=230, Percent_Identity=33.0434782608696, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1790526, Length=243, Percent_Identity=27.1604938271605, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36419; Mature: 36419

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRTILLAATCIGAAMLTVASAQAAKQTAAQMILGTSKAVCVNPHPSHAKLSSLVVGFS
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHEEHH
QSQGNQNPFRAEETRSLREAAHQVHAKRYIYTNAHSNEAKQVADVESMINQGAQALVIAP
HCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEE
LNSTGLQPAFAQAVAKHIPIITIDRETAGTHCSDFLSFVGSDFYNQGVIDGRELAKATGG
CCCCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCHHHCCCCCCHHHHHHHCCC
HAVIAEIQGAYGNSVETARTKGFAAAISKYPGMKVIAAQTGNWSTTDAQKVVSQILLAHP
CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
DVNAIYTQSDTMAYGAITALRDAGKKPGQVKIVTIDGTKQGVQDIVSGWIYADDETNPRF
CCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCEEECCCCCCCC
GPIAMHEIQNWLDGKPVPQKITIRDHLYTPANAKAALASGVPY
CCCHHHHHHHHHCCCCCCCEEEEHHCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MKTRTILLAATCIGAAMLTVASAQAAKQTAAQMILGTSKAVCVNPHPSHAKLSSLVVGFS
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHEEHH
QSQGNQNPFRAEETRSLREAAHQVHAKRYIYTNAHSNEAKQVADVESMINQGAQALVIAP
HCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEE
LNSTGLQPAFAQAVAKHIPIITIDRETAGTHCSDFLSFVGSDFYNQGVIDGRELAKATGG
CCCCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCHHHCCCCCCHHHHHHHCCC
HAVIAEIQGAYGNSVETARTKGFAAAISKYPGMKVIAAQTGNWSTTDAQKVVSQILLAHP
CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
DVNAIYTQSDTMAYGAITALRDAGKKPGQVKIVTIDGTKQGVQDIVSGWIYADDETNPRF
CCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCEEECCCCCCCC
GPIAMHEIQNWLDGKPVPQKITIRDHLYTPANAKAALASGVPY
CCCHHHHHHHHHCCCCCCCEEEEHHCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 9298646 [H]