| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148261154
Identifier: 148261154
GI number: 148261154
Start: 2387082
End: 2387798
Strand: Reverse
Name: 148261154
Synonym: Acry_2163
Alternate gene names: NA
Gene position: 2387798-2387082 (Counterclockwise)
Preceding gene: 148261155
Following gene: 148261153
Centisome position: 70.45
GC content: 68.2
Gene sequence:
>717_bases ATGACCGATCAGGCCTTGCCGCGCTCGCGCTGGCGGCGCCTGATCGGGATGGGGGCGATCAGCCTGTTCATGCTGGTCGC CCTGATCGCCCTCGGCGTCTGGCAGGTCCACCGGTGGCACTACAAGGACCGGATCCAGCGCGAGATTCATGCCGCCCAGC TACGGCCGCCGGTTCCGCTCTCCGCAAAACCCTCGCCTTATGAAAAGGTGGCGCTGACCGGGACCTGGGTTTCCGGCAAG GCGGCGTTCTATGGCGACCAGATCCGCAATTCGCCGACCGGCCCGCTGCGGGGCGGTCAACTGATCGTGCCGTTCCGCCG CGCGGACGGCGGCGTGGTGCTGGTCGATCTCGGCTGGGTGCGGGGACGGGTGCCGAAGCCGGTGCCCTTGCCCGCGGGGC CGGCGGTGGTTTCGGGCTATGTCCAGGCGCCGCAGAAATTCGGGCCGTTCGCCCCAAGCCCCGATCTGGCCCGGCTGATT TTCTACAAGCTCGATCCGCGGGCGATCGGGGCCGCTCTCGGGTTTGCGGATGCCGCGCCGTTCACCCTGGTGATGCTGGG GCCGAAGCCGGTCGCGGGCGGGCCGATCCCGGCGCCGAGCCTGCCGACGCCGCCGAACAATTCCGAGCAATACGCGCTCA CCTGGTTCGGCCTCGCGCTGGTCGTCGTGCTCGAATATATCTTCTACGTGCGAAAAGTGATTCTGGAGACCGCGTGA
Upstream 100 bases:
>100_bases GCCGCCGCCTGGTACTGGCACTTCGTCGACGTGGTGTGGCTGTTCCTGTTCGTCTGCATCTACTACTTCGGCCGCAGCGC CATCACCGCCGCCTGACCGC
Downstream 100 bases:
>100_bases ACGATCTGGGCACCGACATCCCGGCAACCGCGTATCGGCGACTGGTGTCGCGGTTCGAGCGGCTGGCGATCATCGACGAG GCCAGCGCGATGCTGGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTDQALPRSRWRRLIGMGAISLFMLVALIALGVWQVHRWHYKDRIQREIHAAQLRPPVPLSAKPSPYEKVALTGTWVSGK AAFYGDQIRNSPTGPLRGGQLIVPFRRADGGVVLVDLGWVRGRVPKPVPLPAGPAVVSGYVQAPQKFGPFAPSPDLARLI FYKLDPRAIGAALGFADAAPFTLVMLGPKPVAGGPIPAPSLPTPPNNSEQYALTWFGLALVVVLEYIFYVRKVILETA
Sequences:
>Translated_238_residues MTDQALPRSRWRRLIGMGAISLFMLVALIALGVWQVHRWHYKDRIQREIHAAQLRPPVPLSAKPSPYEKVALTGTWVSGK AAFYGDQIRNSPTGPLRGGQLIVPFRRADGGVVLVDLGWVRGRVPKPVPLPAGPAVVSGYVQAPQKFGPFAPSPDLARLI FYKLDPRAIGAALGFADAAPFTLVMLGPKPVAGGPIPAPSLPTPPNNSEQYALTWFGLALVVVLEYIFYVRKVILETA >Mature_237_residues TDQALPRSRWRRLIGMGAISLFMLVALIALGVWQVHRWHYKDRIQREIHAAQLRPPVPLSAKPSPYEKVALTGTWVSGKA AFYGDQIRNSPTGPLRGGQLIVPFRRADGGVVLVDLGWVRGRVPKPVPLPAGPAVVSGYVQAPQKFGPFAPSPDLARLIF YKLDPRAIGAALGFADAAPFTLVMLGPKPVAGGPIPAPSLPTPPNNSEQYALTWFGLALVVVLEYIFYVRKVILETA
Specific function: Unknown
COG id: COG3346
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SURF1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002994 [H]
Pfam domain/function: PF02104 SURF1 [H]
EC number: NA
Molecular weight: Translated: 25873; Mature: 25742
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: PS50895 SURF1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQALPRSRWRRLIGMGAISLFMLVALIALGVWQVHRWHYKDRIQREIHAAQLRPPVPL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SAKPSPYEKVALTGTWVSGKAAFYGDQIRNSPTGPLRGGQLIVPFRRADGGVVLVDLGWV CCCCCCCCEEEEEEEEECCCHHEECHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEECHH RGRVPKPVPLPAGPAVVSGYVQAPQKFGPFAPSPDLARLIFYKLDPRAIGAALGFADAAP CCCCCCCCCCCCCHHHHHHHHHCHHHCCCCCCCCHHHHEEHEECCCHHHHHHHCCCCCCC FTLVMLGPKPVAGGPIPAPSLPTPPNNSEQYALTWFGLALVVVLEYIFYVRKVILETA EEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDQALPRSRWRRLIGMGAISLFMLVALIALGVWQVHRWHYKDRIQREIHAAQLRPPVPL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SAKPSPYEKVALTGTWVSGKAAFYGDQIRNSPTGPLRGGQLIVPFRRADGGVVLVDLGWV CCCCCCCCEEEEEEEEECCCHHEECHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEECHH RGRVPKPVPLPAGPAVVSGYVQAPQKFGPFAPSPDLARLIFYKLDPRAIGAALGFADAAP CCCCCCCCCCCCCHHHHHHHHHCHHHCCCCCCCCHHHHEEHEECCCHHHHHHHCCCCCCC FTLVMLGPKPVAGGPIPAPSLPTPPNNSEQYALTWFGLALVVVLEYIFYVRKVILETA EEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]