Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

Click here to switch to the map view.

The map label for this gene is ypwA [H]

Identifier: 148261153

GI number: 148261153

Start: 2385571

End: 2387085

Strand: Reverse

Name: ypwA [H]

Synonym: Acry_2162

Alternate gene names: 148261153

Gene position: 2387085-2385571 (Counterclockwise)

Preceding gene: 148261154

Following gene: 148261150

Centisome position: 70.43

GC content: 73.27

Gene sequence:

>1515_bases
GTGAACGATCTGGGCACCGACATCCCGGCAACCGCGTATCGGCGACTGGTGTCGCGGTTCGAGCGGCTGGCGATCATCGA
CGAGGCCAGCGCGATGCTGGGCTGGGACCAGGCGGCGGTGATGCCGGAAGGCGGCGCCGCGGCGCGGGGCGACCAGCTGG
CGACGCTCGCCGGCGTCGCCCATGGGATGCTGGCGGCGCCGGAGGTCGAGGAGGATCTCGCCGCCGCCGAAATCGCGCCG
CCCGCCGATCCGGTCGAGCGGCGCAATCTCGCGCTGATGCGGCGGGCGTATCGGCGGGCGACGGCGGTGCCGGCCGATCT
GGTCGAGGCCGTGGCCCGCGAAAGCGCGGCCTGCGAGACGGTGTGGCGCGGGGCGCGGCGGGATGCCGATTTCGCCGCCG
TCCGCCCGAGGCTGGAGGTGCTGCTCGGGCTGATCCGCGAACAGGCGGCGGCACTCGGCGCGACGCTCGGCCTCTCGCCC
TACGATGCGCTGATCGATTCCTACCAGCCGGGAATCACCGCGGCCGAAATCGACCCGGTGTTCGACCGCTACGAGGCGTT
CCTGCGGGACCATCTCGCCACCGTCGAGGCGCGGCAGGCGGGGCGGATGGCTGGCCTGCCGGGCACGCCGCCCTTCGCCG
AGGCGGCGCAGGAGGCGCTGTGCCGCCGCCTCGCCGAGCGCGTCGGGCTCGATTTCCGGGGTGCGCGGCTGGACCGCTCG
CTGCACCCGTTCTGCGGCGGCACGCCGACCGACATCCGGATCACCACGCGGTATGACGAGGCGGATTTCGCCTCCGCCCT
GATGGGCGTGCTGCATGAATCCGGCCACGGGCTGTACGAGGCCGGATTGCCGCGCGCGCGCGCGCGCCAGCCCGTCGGCG
CGGCGGCCGGCATGGCGGTGCATGAAAGCCAGTCGCTGATCGTGGAATTGCAGGCGGCGCGATCCGATCCGTTCCTGCGC
TGGCTCGGCCCGCAACTCGCCGCCGCCTTCGGCCAGCCGCCGGCGGATTTCGCGCCGGACCGGCTGGCGGCGCGGCTGCG
GCGGGTCGAGCGGAGTTTCATCCGCGTCGAGGCGGACGAGGTGACCTACCCGGCGCATGTGATTCTCCGCTTCCGGCTGG
AGGCGGCGATGGTGGCCGGCGACCTCGCGGTTGCCGACCTGCCGGCGGCCTGGAACGACGGGATGCGCGCGCTGCTCGGC
ATCGTGCCGCCGGACGACGCCAGGGGCTGCCTGCAGGACATTCACTGGTACGCGGGGCTGTTCGGCTATTTTCCGTCCTA
CACGCTTGGCGCGATGGCCGCGGCGCAGCTGATGCAGGCGGCGCGGCGGGCGCGGCCGGACATCGACGCCGCCCTGGCGG
AGGGCGATTTTGCCCCGCTGCGGGACTGGCTGCGCGCCAATGTCCACGGTCACGGCGCGCGCTATGGGTTCAACGAACTG
TTGGTCGAGGCGACCGGCAAGCCGCTCGACCCCGCTTCGTTCGAGGCGCATCTGCGGGCGCGTTACCTGGCCTGA

Upstream 100 bases:

>100_bases
CGAACAATTCCGAGCAATACGCGCTCACCTGGTTCGGCCTCGCGCTGGTCGTCGTGCTCGAATATATCTTCTACGTGCGA
AAAGTGATTCTGGAGACCGC

Downstream 100 bases:

>100_bases
GGCCGCCCGCCGCCGGGCGGGTCAGGCGGCGACGCGCTTGAGGCCGGCCTTGAGCGAACGGCGGGAGGTCGCGAGATGAA
CCGCCATGGCAAGCTCGGCC

Product: carboxypeptidase Taq

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MNDLGTDIPATAYRRLVSRFERLAIIDEASAMLGWDQAAVMPEGGAAARGDQLATLAGVAHGMLAAPEVEEDLAAAEIAP
PADPVERRNLALMRRAYRRATAVPADLVEAVARESAACETVWRGARRDADFAAVRPRLEVLLGLIREQAAALGATLGLSP
YDALIDSYQPGITAAEIDPVFDRYEAFLRDHLATVEARQAGRMAGLPGTPPFAEAAQEALCRRLAERVGLDFRGARLDRS
LHPFCGGTPTDIRITTRYDEADFASALMGVLHESGHGLYEAGLPRARARQPVGAAAGMAVHESQSLIVELQAARSDPFLR
WLGPQLAAAFGQPPADFAPDRLAARLRRVERSFIRVEADEVTYPAHVILRFRLEAAMVAGDLAVADLPAAWNDGMRALLG
IVPPDDARGCLQDIHWYAGLFGYFPSYTLGAMAAAQLMQAARRARPDIDAALAEGDFAPLRDWLRANVHGHGARYGFNEL
LVEATGKPLDPASFEAHLRARYLA

Sequences:

>Translated_504_residues
MNDLGTDIPATAYRRLVSRFERLAIIDEASAMLGWDQAAVMPEGGAAARGDQLATLAGVAHGMLAAPEVEEDLAAAEIAP
PADPVERRNLALMRRAYRRATAVPADLVEAVARESAACETVWRGARRDADFAAVRPRLEVLLGLIREQAAALGATLGLSP
YDALIDSYQPGITAAEIDPVFDRYEAFLRDHLATVEARQAGRMAGLPGTPPFAEAAQEALCRRLAERVGLDFRGARLDRS
LHPFCGGTPTDIRITTRYDEADFASALMGVLHESGHGLYEAGLPRARARQPVGAAAGMAVHESQSLIVELQAARSDPFLR
WLGPQLAAAFGQPPADFAPDRLAARLRRVERSFIRVEADEVTYPAHVILRFRLEAAMVAGDLAVADLPAAWNDGMRALLG
IVPPDDARGCLQDIHWYAGLFGYFPSYTLGAMAAAQLMQAARRARPDIDAALAEGDFAPLRDWLRANVHGHGARYGFNEL
LVEATGKPLDPASFEAHLRARYLA
>Mature_504_residues
MNDLGTDIPATAYRRLVSRFERLAIIDEASAMLGWDQAAVMPEGGAAARGDQLATLAGVAHGMLAAPEVEEDLAAAEIAP
PADPVERRNLALMRRAYRRATAVPADLVEAVARESAACETVWRGARRDADFAAVRPRLEVLLGLIREQAAALGATLGLSP
YDALIDSYQPGITAAEIDPVFDRYEAFLRDHLATVEARQAGRMAGLPGTPPFAEAAQEALCRRLAERVGLDFRGARLDRS
LHPFCGGTPTDIRITTRYDEADFASALMGVLHESGHGLYEAGLPRARARQPVGAAAGMAVHESQSLIVELQAARSDPFLR
WLGPQLAAAFGQPPADFAPDRLAARLRRVERSFIRVEADEVTYPAHVILRFRLEAAMVAGDLAVADLPAAWNDGMRALLG
IVPPDDARGCLQDIHWYAGLFGYFPSYTLGAMAAAQLMQAARRARPDIDAALAEGDFAPLRDWLRANVHGHGARYGFNEL
LVEATGKPLDPASFEAHLRARYLA

Specific function: Unknown

COG id: COG2317

COG function: function code E; Zn-dependent carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001333 [H]

Pfam domain/function: PF02074 Peptidase_M32 [H]

EC number: NA

Molecular weight: Translated: 54433; Mature: 54433

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLGTDIPATAYRRLVSRFERLAIIDEASAMLGWDQAAVMPEGGAAARGDQLATLAGVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHH
HGMLAAPEVEEDLAAAEIAPPADPVERRNLALMRRAYRRATAVPADLVEAVARESAACET
HHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VWRGARRDADFAAVRPRLEVLLGLIREQAAALGATLGLSPYDALIDSYQPGITAAEIDPV
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH
FDRYEAFLRDHLATVEARQAGRMAGLPGTPPFAEAAQEALCRRLAERVGLDFRGARLDRS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
LHPFCGGTPTDIRITTRYDEADFASALMGVLHESGHGLYEAGLPRARARQPVGAAAGMAV
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCHHHCCHH
HESQSLIVELQAARSDPFLRWLGPQLAAAFGQPPADFAPDRLAARLRRVERSFIRVEADE
CCCCHHEEEEEHHCCCCHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECCCC
VTYPAHVILRFRLEAAMVAGDLAVADLPAAWNDGMRALLGIVPPDDARGCLQDIHWYAGL
CCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
FGYFPSYTLGAMAAAQLMQAARRARPDIDAALAEGDFAPLRDWLRANVHGHGARYGFNEL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHH
LVEATGKPLDPASFEAHLRARYLA
HHHHCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNDLGTDIPATAYRRLVSRFERLAIIDEASAMLGWDQAAVMPEGGAAARGDQLATLAGVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHH
HGMLAAPEVEEDLAAAEIAPPADPVERRNLALMRRAYRRATAVPADLVEAVARESAACET
HHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VWRGARRDADFAAVRPRLEVLLGLIREQAAALGATLGLSPYDALIDSYQPGITAAEIDPV
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH
FDRYEAFLRDHLATVEARQAGRMAGLPGTPPFAEAAQEALCRRLAERVGLDFRGARLDRS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
LHPFCGGTPTDIRITTRYDEADFASALMGVLHESGHGLYEAGLPRARARQPVGAAAGMAV
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCHHHCCHH
HESQSLIVELQAARSDPFLRWLGPQLAAAFGQPPADFAPDRLAARLRRVERSFIRVEADE
CCCCHHEEEEEHHCCCCHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECCCC
VTYPAHVILRFRLEAAMVAGDLAVADLPAAWNDGMRALLGIVPPDDARGCLQDIHWYAGL
CCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
FGYFPSYTLGAMAAAQLMQAARRARPDIDAALAEGDFAPLRDWLRANVHGHGARYGFNEL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHH
LVEATGKPLDPASFEAHLRARYLA
HHHHCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]