| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is ypwA [H]
Identifier: 148261153
GI number: 148261153
Start: 2385571
End: 2387085
Strand: Reverse
Name: ypwA [H]
Synonym: Acry_2162
Alternate gene names: 148261153
Gene position: 2387085-2385571 (Counterclockwise)
Preceding gene: 148261154
Following gene: 148261150
Centisome position: 70.43
GC content: 73.27
Gene sequence:
>1515_bases GTGAACGATCTGGGCACCGACATCCCGGCAACCGCGTATCGGCGACTGGTGTCGCGGTTCGAGCGGCTGGCGATCATCGA CGAGGCCAGCGCGATGCTGGGCTGGGACCAGGCGGCGGTGATGCCGGAAGGCGGCGCCGCGGCGCGGGGCGACCAGCTGG CGACGCTCGCCGGCGTCGCCCATGGGATGCTGGCGGCGCCGGAGGTCGAGGAGGATCTCGCCGCCGCCGAAATCGCGCCG CCCGCCGATCCGGTCGAGCGGCGCAATCTCGCGCTGATGCGGCGGGCGTATCGGCGGGCGACGGCGGTGCCGGCCGATCT GGTCGAGGCCGTGGCCCGCGAAAGCGCGGCCTGCGAGACGGTGTGGCGCGGGGCGCGGCGGGATGCCGATTTCGCCGCCG TCCGCCCGAGGCTGGAGGTGCTGCTCGGGCTGATCCGCGAACAGGCGGCGGCACTCGGCGCGACGCTCGGCCTCTCGCCC TACGATGCGCTGATCGATTCCTACCAGCCGGGAATCACCGCGGCCGAAATCGACCCGGTGTTCGACCGCTACGAGGCGTT CCTGCGGGACCATCTCGCCACCGTCGAGGCGCGGCAGGCGGGGCGGATGGCTGGCCTGCCGGGCACGCCGCCCTTCGCCG AGGCGGCGCAGGAGGCGCTGTGCCGCCGCCTCGCCGAGCGCGTCGGGCTCGATTTCCGGGGTGCGCGGCTGGACCGCTCG CTGCACCCGTTCTGCGGCGGCACGCCGACCGACATCCGGATCACCACGCGGTATGACGAGGCGGATTTCGCCTCCGCCCT GATGGGCGTGCTGCATGAATCCGGCCACGGGCTGTACGAGGCCGGATTGCCGCGCGCGCGCGCGCGCCAGCCCGTCGGCG CGGCGGCCGGCATGGCGGTGCATGAAAGCCAGTCGCTGATCGTGGAATTGCAGGCGGCGCGATCCGATCCGTTCCTGCGC TGGCTCGGCCCGCAACTCGCCGCCGCCTTCGGCCAGCCGCCGGCGGATTTCGCGCCGGACCGGCTGGCGGCGCGGCTGCG GCGGGTCGAGCGGAGTTTCATCCGCGTCGAGGCGGACGAGGTGACCTACCCGGCGCATGTGATTCTCCGCTTCCGGCTGG AGGCGGCGATGGTGGCCGGCGACCTCGCGGTTGCCGACCTGCCGGCGGCCTGGAACGACGGGATGCGCGCGCTGCTCGGC ATCGTGCCGCCGGACGACGCCAGGGGCTGCCTGCAGGACATTCACTGGTACGCGGGGCTGTTCGGCTATTTTCCGTCCTA CACGCTTGGCGCGATGGCCGCGGCGCAGCTGATGCAGGCGGCGCGGCGGGCGCGGCCGGACATCGACGCCGCCCTGGCGG AGGGCGATTTTGCCCCGCTGCGGGACTGGCTGCGCGCCAATGTCCACGGTCACGGCGCGCGCTATGGGTTCAACGAACTG TTGGTCGAGGCGACCGGCAAGCCGCTCGACCCCGCTTCGTTCGAGGCGCATCTGCGGGCGCGTTACCTGGCCTGA
Upstream 100 bases:
>100_bases CGAACAATTCCGAGCAATACGCGCTCACCTGGTTCGGCCTCGCGCTGGTCGTCGTGCTCGAATATATCTTCTACGTGCGA AAAGTGATTCTGGAGACCGC
Downstream 100 bases:
>100_bases GGCCGCCCGCCGCCGGGCGGGTCAGGCGGCGACGCGCTTGAGGCCGGCCTTGAGCGAACGGCGGGAGGTCGCGAGATGAA CCGCCATGGCAAGCTCGGCC
Product: carboxypeptidase Taq
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MNDLGTDIPATAYRRLVSRFERLAIIDEASAMLGWDQAAVMPEGGAAARGDQLATLAGVAHGMLAAPEVEEDLAAAEIAP PADPVERRNLALMRRAYRRATAVPADLVEAVARESAACETVWRGARRDADFAAVRPRLEVLLGLIREQAAALGATLGLSP YDALIDSYQPGITAAEIDPVFDRYEAFLRDHLATVEARQAGRMAGLPGTPPFAEAAQEALCRRLAERVGLDFRGARLDRS LHPFCGGTPTDIRITTRYDEADFASALMGVLHESGHGLYEAGLPRARARQPVGAAAGMAVHESQSLIVELQAARSDPFLR WLGPQLAAAFGQPPADFAPDRLAARLRRVERSFIRVEADEVTYPAHVILRFRLEAAMVAGDLAVADLPAAWNDGMRALLG IVPPDDARGCLQDIHWYAGLFGYFPSYTLGAMAAAQLMQAARRARPDIDAALAEGDFAPLRDWLRANVHGHGARYGFNEL LVEATGKPLDPASFEAHLRARYLA
Sequences:
>Translated_504_residues MNDLGTDIPATAYRRLVSRFERLAIIDEASAMLGWDQAAVMPEGGAAARGDQLATLAGVAHGMLAAPEVEEDLAAAEIAP PADPVERRNLALMRRAYRRATAVPADLVEAVARESAACETVWRGARRDADFAAVRPRLEVLLGLIREQAAALGATLGLSP YDALIDSYQPGITAAEIDPVFDRYEAFLRDHLATVEARQAGRMAGLPGTPPFAEAAQEALCRRLAERVGLDFRGARLDRS LHPFCGGTPTDIRITTRYDEADFASALMGVLHESGHGLYEAGLPRARARQPVGAAAGMAVHESQSLIVELQAARSDPFLR WLGPQLAAAFGQPPADFAPDRLAARLRRVERSFIRVEADEVTYPAHVILRFRLEAAMVAGDLAVADLPAAWNDGMRALLG IVPPDDARGCLQDIHWYAGLFGYFPSYTLGAMAAAQLMQAARRARPDIDAALAEGDFAPLRDWLRANVHGHGARYGFNEL LVEATGKPLDPASFEAHLRARYLA >Mature_504_residues MNDLGTDIPATAYRRLVSRFERLAIIDEASAMLGWDQAAVMPEGGAAARGDQLATLAGVAHGMLAAPEVEEDLAAAEIAP PADPVERRNLALMRRAYRRATAVPADLVEAVARESAACETVWRGARRDADFAAVRPRLEVLLGLIREQAAALGATLGLSP YDALIDSYQPGITAAEIDPVFDRYEAFLRDHLATVEARQAGRMAGLPGTPPFAEAAQEALCRRLAERVGLDFRGARLDRS LHPFCGGTPTDIRITTRYDEADFASALMGVLHESGHGLYEAGLPRARARQPVGAAAGMAVHESQSLIVELQAARSDPFLR WLGPQLAAAFGQPPADFAPDRLAARLRRVERSFIRVEADEVTYPAHVILRFRLEAAMVAGDLAVADLPAAWNDGMRALLG IVPPDDARGCLQDIHWYAGLFGYFPSYTLGAMAAAQLMQAARRARPDIDAALAEGDFAPLRDWLRANVHGHGARYGFNEL LVEATGKPLDPASFEAHLRARYLA
Specific function: Unknown
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: NA
Molecular weight: Translated: 54433; Mature: 54433
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLGTDIPATAYRRLVSRFERLAIIDEASAMLGWDQAAVMPEGGAAARGDQLATLAGVA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHH HGMLAAPEVEEDLAAAEIAPPADPVERRNLALMRRAYRRATAVPADLVEAVARESAACET HHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VWRGARRDADFAAVRPRLEVLLGLIREQAAALGATLGLSPYDALIDSYQPGITAAEIDPV HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH FDRYEAFLRDHLATVEARQAGRMAGLPGTPPFAEAAQEALCRRLAERVGLDFRGARLDRS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCC LHPFCGGTPTDIRITTRYDEADFASALMGVLHESGHGLYEAGLPRARARQPVGAAAGMAV CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCHHHCCHH HESQSLIVELQAARSDPFLRWLGPQLAAAFGQPPADFAPDRLAARLRRVERSFIRVEADE CCCCHHEEEEEHHCCCCHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECCCC VTYPAHVILRFRLEAAMVAGDLAVADLPAAWNDGMRALLGIVPPDDARGCLQDIHWYAGL CCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH FGYFPSYTLGAMAAAQLMQAARRARPDIDAALAEGDFAPLRDWLRANVHGHGARYGFNEL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHH LVEATGKPLDPASFEAHLRARYLA HHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MNDLGTDIPATAYRRLVSRFERLAIIDEASAMLGWDQAAVMPEGGAAARGDQLATLAGVA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHH HGMLAAPEVEEDLAAAEIAPPADPVERRNLALMRRAYRRATAVPADLVEAVARESAACET HHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VWRGARRDADFAAVRPRLEVLLGLIREQAAALGATLGLSPYDALIDSYQPGITAAEIDPV HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH FDRYEAFLRDHLATVEARQAGRMAGLPGTPPFAEAAQEALCRRLAERVGLDFRGARLDRS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCC LHPFCGGTPTDIRITTRYDEADFASALMGVLHESGHGLYEAGLPRARARQPVGAAAGMAV CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCHHHCCHH HESQSLIVELQAARSDPFLRWLGPQLAAAFGQPPADFAPDRLAARLRRVERSFIRVEADE CCCCHHEEEEEHHCCCCHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECCCC VTYPAHVILRFRLEAAMVAGDLAVADLPAAWNDGMRALLGIVPPDDARGCLQDIHWYAGL CCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH FGYFPSYTLGAMAAAQLMQAARRARPDIDAALAEGDFAPLRDWLRANVHGHGARYGFNEL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHH LVEATGKPLDPASFEAHLRARYLA HHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]