Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

Click here to switch to the map view.

The map label for this gene is 148261154

Identifier: 148261154

GI number: 148261154

Start: 2387082

End: 2387798

Strand: Reverse

Name: 148261154

Synonym: Acry_2163

Alternate gene names: NA

Gene position: 2387798-2387082 (Counterclockwise)

Preceding gene: 148261155

Following gene: 148261153

Centisome position: 70.45

GC content: 68.2

Gene sequence:

>717_bases
ATGACCGATCAGGCCTTGCCGCGCTCGCGCTGGCGGCGCCTGATCGGGATGGGGGCGATCAGCCTGTTCATGCTGGTCGC
CCTGATCGCCCTCGGCGTCTGGCAGGTCCACCGGTGGCACTACAAGGACCGGATCCAGCGCGAGATTCATGCCGCCCAGC
TACGGCCGCCGGTTCCGCTCTCCGCAAAACCCTCGCCTTATGAAAAGGTGGCGCTGACCGGGACCTGGGTTTCCGGCAAG
GCGGCGTTCTATGGCGACCAGATCCGCAATTCGCCGACCGGCCCGCTGCGGGGCGGTCAACTGATCGTGCCGTTCCGCCG
CGCGGACGGCGGCGTGGTGCTGGTCGATCTCGGCTGGGTGCGGGGACGGGTGCCGAAGCCGGTGCCCTTGCCCGCGGGGC
CGGCGGTGGTTTCGGGCTATGTCCAGGCGCCGCAGAAATTCGGGCCGTTCGCCCCAAGCCCCGATCTGGCCCGGCTGATT
TTCTACAAGCTCGATCCGCGGGCGATCGGGGCCGCTCTCGGGTTTGCGGATGCCGCGCCGTTCACCCTGGTGATGCTGGG
GCCGAAGCCGGTCGCGGGCGGGCCGATCCCGGCGCCGAGCCTGCCGACGCCGCCGAACAATTCCGAGCAATACGCGCTCA
CCTGGTTCGGCCTCGCGCTGGTCGTCGTGCTCGAATATATCTTCTACGTGCGAAAAGTGATTCTGGAGACCGCGTGA

Upstream 100 bases:

>100_bases
GCCGCCGCCTGGTACTGGCACTTCGTCGACGTGGTGTGGCTGTTCCTGTTCGTCTGCATCTACTACTTCGGCCGCAGCGC
CATCACCGCCGCCTGACCGC

Downstream 100 bases:

>100_bases
ACGATCTGGGCACCGACATCCCGGCAACCGCGTATCGGCGACTGGTGTCGCGGTTCGAGCGGCTGGCGATCATCGACGAG
GCCAGCGCGATGCTGGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTDQALPRSRWRRLIGMGAISLFMLVALIALGVWQVHRWHYKDRIQREIHAAQLRPPVPLSAKPSPYEKVALTGTWVSGK
AAFYGDQIRNSPTGPLRGGQLIVPFRRADGGVVLVDLGWVRGRVPKPVPLPAGPAVVSGYVQAPQKFGPFAPSPDLARLI
FYKLDPRAIGAALGFADAAPFTLVMLGPKPVAGGPIPAPSLPTPPNNSEQYALTWFGLALVVVLEYIFYVRKVILETA

Sequences:

>Translated_238_residues
MTDQALPRSRWRRLIGMGAISLFMLVALIALGVWQVHRWHYKDRIQREIHAAQLRPPVPLSAKPSPYEKVALTGTWVSGK
AAFYGDQIRNSPTGPLRGGQLIVPFRRADGGVVLVDLGWVRGRVPKPVPLPAGPAVVSGYVQAPQKFGPFAPSPDLARLI
FYKLDPRAIGAALGFADAAPFTLVMLGPKPVAGGPIPAPSLPTPPNNSEQYALTWFGLALVVVLEYIFYVRKVILETA
>Mature_237_residues
TDQALPRSRWRRLIGMGAISLFMLVALIALGVWQVHRWHYKDRIQREIHAAQLRPPVPLSAKPSPYEKVALTGTWVSGKA
AFYGDQIRNSPTGPLRGGQLIVPFRRADGGVVLVDLGWVRGRVPKPVPLPAGPAVVSGYVQAPQKFGPFAPSPDLARLIF
YKLDPRAIGAALGFADAAPFTLVMLGPKPVAGGPIPAPSLPTPPNNSEQYALTWFGLALVVVLEYIFYVRKVILETA

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 25873; Mature: 25742

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQALPRSRWRRLIGMGAISLFMLVALIALGVWQVHRWHYKDRIQREIHAAQLRPPVPL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SAKPSPYEKVALTGTWVSGKAAFYGDQIRNSPTGPLRGGQLIVPFRRADGGVVLVDLGWV
CCCCCCCCEEEEEEEEECCCHHEECHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEECHH
RGRVPKPVPLPAGPAVVSGYVQAPQKFGPFAPSPDLARLIFYKLDPRAIGAALGFADAAP
CCCCCCCCCCCCCHHHHHHHHHCHHHCCCCCCCCHHHHEEHEECCCHHHHHHHCCCCCCC
FTLVMLGPKPVAGGPIPAPSLPTPPNNSEQYALTWFGLALVVVLEYIFYVRKVILETA
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDQALPRSRWRRLIGMGAISLFMLVALIALGVWQVHRWHYKDRIQREIHAAQLRPPVPL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SAKPSPYEKVALTGTWVSGKAAFYGDQIRNSPTGPLRGGQLIVPFRRADGGVVLVDLGWV
CCCCCCCCEEEEEEEEECCCHHEECHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEECHH
RGRVPKPVPLPAGPAVVSGYVQAPQKFGPFAPSPDLARLIFYKLDPRAIGAALGFADAAP
CCCCCCCCCCCCCHHHHHHHHHCHHHCCCCCCCCHHHHEEHEECCCHHHHHHHCCCCCCC
FTLVMLGPKPVAGGPIPAPSLPTPPNNSEQYALTWFGLALVVVLEYIFYVRKVILETA
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]