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The map label for this gene is cydA [H]

Identifier: 148261032

GI number: 148261032

Start: 2239749

End: 2241167

Strand: Reverse

Name: cydA [H]

Synonym: Acry_2040

Alternate gene names: 148261032

Gene position: 2241167-2239749 (Counterclockwise)

Preceding gene: 148261033

Following gene: 148261031

Centisome position: 66.13

GC content: 68.29

Gene sequence:

>1419_bases
ATGACAAGCTTGCATGCCGGCGGACTGGCGCTCGTGCTCGCGCGCGCCCAGTTCGGGTTCACCATCGCCTTTCACATCAT
GTTCCCGGCCTTCTCGATCGGGCTCGCCGCCTATCTCGCGGTGCTCGAGCTGATGTGGCTGGTCACCAAGCGCCCGGTCT
ATCTCGACGCCTACCGCTACTGGCTGAAGATCTTCGCCGTCATCTTCGCGATCGGCGTCGTCTCCGGCCTGGTGATGGCC
TACGAGGTGGGCGCCAACTGGGCGGGCTATTCGGCCAAGGTCGGGCCGATCCTCGGGCCGCTGCTCGCCTGGGAGACGAT
GTCGGCCTTCTTCCTCGAGGCCGGCTTCCTCGGCATCATGCTGTTCGGGATGTCGCGCGTCGGCCCGAAGCTGCATTTCG
CGGCGACCGCGCTGGTCTCGATCGGCACGCTGATCTCGGCCTCGTGGATCCTCGCCGCGAATTCGTGGATGCAGACGCCG
CGCGGCTACGCCCTTGCCCCGGATGGCGCCTTCATCCCGAAGAACTGGCTCGCCATCATCTTCAACCCGACCTTCCCCTA
TATGTGGCTGCACATGGTGCTCGCCGCCTTCATCGCGACGGCGCTCGCCGTCGGCGCGGTCGGCGCGTTCCACCTGCTGC
GCAACCCGAAGAATCCGGTCAGCCGGCTGATGTTCTCGATGGCGATGTGGCTGCTGACCATCGCCGTGCCGGTGCAGGGC
TTCGTCGGCGACGAATCCGGCCGGGCGACGATGACCGACCAGCCGCTGAAGCTCGCCGCGATGGAGGGCGACTTCCACAC
CCGCGCCGGCCAGGCGCTGCACCTGTTCGGCTGGCCGAGCCGCAGCCTCGGCCGCCTGCTCTATGACGTGAAGATCCCCG
ATCTCGGCTCGCTGATCATCACCCACAAGCTGCATGGCGTGGTGCAGGGGCTGGATGCCTTTCCGAAGTCCGACTGGCCG
GTGCTGATCCCCACCTTCTGGGGCTTCCGCGTCATGGTCGGGCTGTGGTCGCTGATGCTGGTGCTCGCCCTCGGCGCGCT
GGCCCTGCGCCGCGGCGGCCGGCTCTACGAGAACGCCTGGTTCAAGCGCTTCGCGGTGGCGATGGGCCCGGCCGGCTTCC
TCACCATCATCGCCGGCTGGGTGGTCACCGAAACCGGCCGCCAGCCCTGGACGGTCTATGGCGTGCTGCGCACGGTGCAG
AGCGCCTCGCCGCTCACCCTGGGCGAGATCGTCTGGTCGTTCGGCATCATCATCGTGCTCTACACGCTCGTCTTCGGCGT
CGGCATCCGCTACGTGCTCGGCCTGATGGCGCATGAGCCGACGGTGGGCGAACCGCCGCTGCGCGACGACAAGCCGCTGC
GCAGCCACGGCCCGCACCGCCTGCACGATCCCGCGCCGGCCCCGAGCCCGGCGGAGTGA

Upstream 100 bases:

>100_bases
TCGGGCGCGGCAAGGCTGGCCGCTCCCGGCCCGAGACCACCGAAGCCGACACCCTCGCCGGCGCCGACGACAACCACAAC
AACGACGATACGGACAGAGA

Downstream 100 bases:

>100_bases
TGGCCATGCTCAACGCCCATACCCTGCCGATCATCTGGGGCTGCATCATGGCCTTCGTGATCTTCGCCTATGTCGTGCTC
GACGGGTTCGATCTCGGCGT

Product: cytochrome bd ubiquinol oxidase subunit I

Products: NA

Alternate protein names: Cytochrome d ubiquinol oxidase subunit I [H]

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MTSLHAGGLALVLARAQFGFTIAFHIMFPAFSIGLAAYLAVLELMWLVTKRPVYLDAYRYWLKIFAVIFAIGVVSGLVMA
YEVGANWAGYSAKVGPILGPLLAWETMSAFFLEAGFLGIMLFGMSRVGPKLHFAATALVSIGTLISASWILAANSWMQTP
RGYALAPDGAFIPKNWLAIIFNPTFPYMWLHMVLAAFIATALAVGAVGAFHLLRNPKNPVSRLMFSMAMWLLTIAVPVQG
FVGDESGRATMTDQPLKLAAMEGDFHTRAGQALHLFGWPSRSLGRLLYDVKIPDLGSLIITHKLHGVVQGLDAFPKSDWP
VLIPTFWGFRVMVGLWSLMLVLALGALALRRGGRLYENAWFKRFAVAMGPAGFLTIIAGWVVTETGRQPWTVYGVLRTVQ
SASPLTLGEIVWSFGIIIVLYTLVFGVGIRYVLGLMAHEPTVGEPPLRDDKPLRSHGPHRLHDPAPAPSPAE

Sequences:

>Translated_472_residues
MTSLHAGGLALVLARAQFGFTIAFHIMFPAFSIGLAAYLAVLELMWLVTKRPVYLDAYRYWLKIFAVIFAIGVVSGLVMA
YEVGANWAGYSAKVGPILGPLLAWETMSAFFLEAGFLGIMLFGMSRVGPKLHFAATALVSIGTLISASWILAANSWMQTP
RGYALAPDGAFIPKNWLAIIFNPTFPYMWLHMVLAAFIATALAVGAVGAFHLLRNPKNPVSRLMFSMAMWLLTIAVPVQG
FVGDESGRATMTDQPLKLAAMEGDFHTRAGQALHLFGWPSRSLGRLLYDVKIPDLGSLIITHKLHGVVQGLDAFPKSDWP
VLIPTFWGFRVMVGLWSLMLVLALGALALRRGGRLYENAWFKRFAVAMGPAGFLTIIAGWVVTETGRQPWTVYGVLRTVQ
SASPLTLGEIVWSFGIIIVLYTLVFGVGIRYVLGLMAHEPTVGEPPLRDDKPLRSHGPHRLHDPAPAPSPAE
>Mature_471_residues
TSLHAGGLALVLARAQFGFTIAFHIMFPAFSIGLAAYLAVLELMWLVTKRPVYLDAYRYWLKIFAVIFAIGVVSGLVMAY
EVGANWAGYSAKVGPILGPLLAWETMSAFFLEAGFLGIMLFGMSRVGPKLHFAATALVSIGTLISASWILAANSWMQTPR
GYALAPDGAFIPKNWLAIIFNPTFPYMWLHMVLAAFIATALAVGAVGAFHLLRNPKNPVSRLMFSMAMWLLTIAVPVQGF
VGDESGRATMTDQPLKLAAMEGDFHTRAGQALHLFGWPSRSLGRLLYDVKIPDLGSLIITHKLHGVVQGLDAFPKSDWPV
LIPTFWGFRVMVGLWSLMLVLALGALALRRGGRLYENAWFKRFAVAMGPAGFLTIIAGWVVTETGRQPWTVYGVLRTVQS
ASPLTLGEIVWSFGIIIVLYTLVFGVGIRYVLGLMAHEPTVGEPPLRDDKPLRSHGPHRLHDPAPAPSPAE

Specific function: Cytochrome Oxidase Subunit. [C]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787212, Length=312, Percent_Identity=36.2179487179487, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI87081779, Length=306, Percent_Identity=33.3333333333333, Blast_Score=167, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 51544; Mature: 51413

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLHAGGLALVLARAQFGFTIAFHIMFPAFSIGLAAYLAVLELMWLVTKRPVYLDAYRY
CCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
WLKIFAVIFAIGVVSGLVMAYEVGANWAGYSAKVGPILGPLLAWETMSAFFLEAGFLGIM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGMSRVGPKLHFAATALVSIGTLISASWILAANSWMQTPRGYALAPDGAFIPKNWLAII
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEE
FNPTFPYMWLHMVLAAFIATALAVGAVGAFHLLRNPKNPVSRLMFSMAMWLLTIAVPVQG
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
FVGDESGRATMTDQPLKLAAMEGDFHTRAGQALHLFGWPSRSLGRLLYDVKIPDLGSLII
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHEEEECCCCCCHHHH
THKLHGVVQGLDAFPKSDWPVLIPTFWGFRVMVGLWSLMLVLALGALALRRGGRLYENAW
HHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FKRFAVAMGPAGFLTIIAGWVVTETGRQPWTVYGVLRTVQSASPLTLGEIVWSFGIIIVL
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YTLVFGVGIRYVLGLMAHEPTVGEPPLRDDKPLRSHGPHRLHDPAPAPSPAE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSLHAGGLALVLARAQFGFTIAFHIMFPAFSIGLAAYLAVLELMWLVTKRPVYLDAYRY
CCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
WLKIFAVIFAIGVVSGLVMAYEVGANWAGYSAKVGPILGPLLAWETMSAFFLEAGFLGIM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGMSRVGPKLHFAATALVSIGTLISASWILAANSWMQTPRGYALAPDGAFIPKNWLAII
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEE
FNPTFPYMWLHMVLAAFIATALAVGAVGAFHLLRNPKNPVSRLMFSMAMWLLTIAVPVQG
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
FVGDESGRATMTDQPLKLAAMEGDFHTRAGQALHLFGWPSRSLGRLLYDVKIPDLGSLII
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHEEEECCCCCCHHHH
THKLHGVVQGLDAFPKSDWPVLIPTFWGFRVMVGLWSLMLVLALGALALRRGGRLYENAW
HHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FKRFAVAMGPAGFLTIIAGWVVTETGRQPWTVYGVLRTVQSASPLTLGEIVWSFGIIIVL
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YTLVFGVGIRYVLGLMAHEPTVGEPPLRDDKPLRSHGPHRLHDPAPAPSPAE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]