| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148261033
Identifier: 148261033
GI number: 148261033
Start: 2241164
End: 2241805
Strand: Reverse
Name: 148261033
Synonym: Acry_2041
Alternate gene names: NA
Gene position: 2241805-2241164 (Counterclockwise)
Preceding gene: 148261034
Following gene: 148261032
Centisome position: 66.15
GC content: 67.45
Gene sequence:
>642_bases ATGCCGTTATCCCCCCTCACCGAGGCCTTCGTGCTGCATTTCGGCGAAATGGGCAGCCATTGGGGCATCAACCGCACGGT GGGGCAGATCTATGCGTTGCTTTATGTCTCCGACCGCCCGCTGCCGGCCGACGAGATCGCCGAAACCCTGGGCTTCTCGC GCTCGAACGTGTCGATGGGGTTGAAGGAGCTGCAATCCTGGCGCCTGGTGCGGCTGCAGCATCTGCCGGGTGACCGGCGG GAGCATTTCTCCACCCCCGACGATATCTGGCAGATCGTCCGCACCCTCGCCGAGGAGCGGCGCCGCCGCGAGATCGACCC CACGCTCACCGTGCTGCGCGACCTGCTGATGGAGGCCCCCCGCTCGGAGGCGGACCGCCGCGCCCAGCGCCGCCTCGCCG AGATGCACGACCTGATCGAGCTGCTGATGCGCTGGTCGGAAGACGTGCAGAAGCTCGACAACAAGGATCTGGTCCAGCTC CTCCGCCTCGGCGGCCGCGTGGTCGCGCTGCTGGAACTGAAGAACCGTCTGCCGCTGCTCGGGCGCGGCAAGGCTGGCCG CTCCCGGCCCGAGACCACCGAAGCCGACACCCTCGCCGGCGCCGACGACAACCACAACAACGACGATACGGACAGAGAAT GA
Upstream 100 bases:
>100_bases GCCGCTCCTGCCGGTCGATCACGTCCTGACCTGACCGCCCGCCTTGACAGGGCTGGATCAATGTCTACTTGGATTTCAGA AATTTCTGAAAGTTCAGGCA
Downstream 100 bases:
>100_bases CAAGCTTGCATGCCGGCGGACTGGCGCTCGTGCTCGCGCGCGCCCAGTTCGGGTTCACCATCGCCTTTCACATCATGTTC CCGGCCTTCTCGATCGGGCT
Product: transcriptional regulators-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MPLSPLTEAFVLHFGEMGSHWGINRTVGQIYALLYVSDRPLPADEIAETLGFSRSNVSMGLKELQSWRLVRLQHLPGDRR EHFSTPDDIWQIVRTLAEERRRREIDPTLTVLRDLLMEAPRSEADRRAQRRLAEMHDLIELLMRWSEDVQKLDNKDLVQL LRLGGRVVALLELKNRLPLLGRGKAGRSRPETTEADTLAGADDNHNNDDTDRE
Sequences:
>Translated_213_residues MPLSPLTEAFVLHFGEMGSHWGINRTVGQIYALLYVSDRPLPADEIAETLGFSRSNVSMGLKELQSWRLVRLQHLPGDRR EHFSTPDDIWQIVRTLAEERRRREIDPTLTVLRDLLMEAPRSEADRRAQRRLAEMHDLIELLMRWSEDVQKLDNKDLVQL LRLGGRVVALLELKNRLPLLGRGKAGRSRPETTEADTLAGADDNHNNDDTDRE >Mature_212_residues PLSPLTEAFVLHFGEMGSHWGINRTVGQIYALLYVSDRPLPADEIAETLGFSRSNVSMGLKELQSWRLVRLQHLPGDRRE HFSTPDDIWQIVRTLAEERRRREIDPTLTVLRDLLMEAPRSEADRRAQRRLAEMHDLIELLMRWSEDVQKLDNKDLVQLL RLGGRVVALLELKNRLPLLGRGKAGRSRPETTEADTLAGADDNHNNDDTDRE
Specific function: Unknown
COG id: COG1510
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001845 - InterPro: IPR011991 [H]
Pfam domain/function: PF01022 HTH_5 [H]
EC number: NA
Molecular weight: Translated: 24476; Mature: 24345
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSPLTEAFVLHFGEMGSHWGINRTVGQIYALLYVSDRPLPADEIAETLGFSRSNVSMG CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHH LKELQSWRLVRLQHLPGDRREHFSTPDDIWQIVRTLAEERRRREIDPTLTVLRDLLMEAP HHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC RSEADRRAQRRLAEMHDLIELLMRWSEDVQKLDNKDLVQLLRLGGRVVALLELKNRLPLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCC GRGKAGRSRPETTEADTLAGADDNHNNDDTDRE CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PLSPLTEAFVLHFGEMGSHWGINRTVGQIYALLYVSDRPLPADEIAETLGFSRSNVSMG CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHH LKELQSWRLVRLQHLPGDRREHFSTPDDIWQIVRTLAEERRRREIDPTLTVLRDLLMEAP HHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC RSEADRRAQRRLAEMHDLIELLMRWSEDVQKLDNKDLVQLLRLGGRVVALLELKNRLPLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCC GRGKAGRSRPETTEADTLAGADDNHNNDDTDRE CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087; 12471609 [H]