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The map label for this gene is 148261006

Identifier: 148261006

GI number: 148261006

Start: 2210464

End: 2211063

Strand: Reverse

Name: 148261006

Synonym: Acry_2014

Alternate gene names: NA

Gene position: 2211063-2210464 (Counterclockwise)

Preceding gene: 148261007

Following gene: 148261004

Centisome position: 65.24

GC content: 62.5

Gene sequence:

>600_bases
ATGCAGATCACGGTCTCCGGCAAACAGGTTGACCTCTCAGACGCGCTGCGCGTCCATGTTGCGAACCAGCTCGACACCAT
CACCAACAAGTATTTCGATCACGCGCTCGAAGCGAATGTCACCTTCAGTCGTGCCAGAAGCTTCTTCACGTGTGACATCA
ATGTCCATGCCGGGCGAGGCCTGACCCTGCGCGGGGAAGGCGAGGCGGCCGATGCTCATGCTGCGTTCGACGATGCCGCC
GAGCACATTGCCAAGCGGCTCCGGCGCTATCGGCGCCGGGTGAACGACCATGCCCGCGAGAGCGCCACACGTGATCGCCC
GGAAACCGCGCGCCAATACGTCCTGCAAGAGGTTTCCGAACAAGCCGAGGTTCCGAAAGGCAACGGGTCGGGTGAGCCGG
ATGCCGGGCCTTACGCGGCGGTCGTCGCGGAAACGCCGGCTGAAATCGCTTTTCTTTCGGTCAGCGAGGCGGTGATGCGG
ATGGACCTCGCGGACCAGCCGGTGCTGATGTTCCGCAACTCCGCCAATCGGGCGTTGAACGTTGTCTACCGTCGCAGTGA
CGGCAATATCGGCTGGATCGACAGTTCCGCGGCGAGTTGA

Upstream 100 bases:

>100_bases
ACTTGTCGATTATTGAGACGTATCCGTGCCGACGTAAACGCCCGCTTCACCTGGCGGCCCTACAATGCTCGGGTAAGGCT
CTAACAAAAAGGATCTCGCT

Downstream 100 bases:

>100_bases
ACCTGATTTGCGTGCCTGCGCGGATCAGCCCAACAGGGCCGCCGCGCAGGCATTGAGGATCGAGTCCGCGTCGATGCCAT
AAATCCTGTAAAGGTCAGGG

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MQITVSGKQVDLSDALRVHVANQLDTITNKYFDHALEANVTFSRARSFFTCDINVHAGRGLTLRGEGEAADAHAAFDDAA
EHIAKRLRRYRRRVNDHARESATRDRPETARQYVLQEVSEQAEVPKGNGSGEPDAGPYAAVVAETPAEIAFLSVSEAVMR
MDLADQPVLMFRNSANRALNVVYRRSDGNIGWIDSSAAS

Sequences:

>Translated_199_residues
MQITVSGKQVDLSDALRVHVANQLDTITNKYFDHALEANVTFSRARSFFTCDINVHAGRGLTLRGEGEAADAHAAFDDAA
EHIAKRLRRYRRRVNDHARESATRDRPETARQYVLQEVSEQAEVPKGNGSGEPDAGPYAAVVAETPAEIAFLSVSEAVMR
MDLADQPVLMFRNSANRALNVVYRRSDGNIGWIDSSAAS
>Mature_199_residues
MQITVSGKQVDLSDALRVHVANQLDTITNKYFDHALEANVTFSRARSFFTCDINVHAGRGLTLRGEGEAADAHAAFDDAA
EHIAKRLRRYRRRVNDHARESATRDRPETARQYVLQEVSEQAEVPKGNGSGEPDAGPYAAVVAETPAEIAFLSVSEAVMR
MDLADQPVLMFRNSANRALNVVYRRSDGNIGWIDSSAAS

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21887; Mature: 21887

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQITVSGKQVDLSDALRVHVANQLDTITNKYFDHALEANVTFSRARSFFTCDINVHAGRG
CEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEEEEECCCC
LTLRGEGEAADAHAAFDDAAEHIAKRLRRYRRRVNDHARESATRDRPETARQYVLQEVSE
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QAEVPKGNGSGEPDAGPYAAVVAETPAEIAFLSVSEAVMRMDLADQPVLMFRNSANRALN
HHCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHCCCCCCEEEEECCCCCEEE
VVYRRSDGNIGWIDSSAAS
EEEEECCCCEEECCCCCCC
>Mature Secondary Structure
MQITVSGKQVDLSDALRVHVANQLDTITNKYFDHALEANVTFSRARSFFTCDINVHAGRG
CEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEEEEECCCC
LTLRGEGEAADAHAAFDDAAEHIAKRLRRYRRRVNDHARESATRDRPETARQYVLQEVSE
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QAEVPKGNGSGEPDAGPYAAVVAETPAEIAFLSVSEAVMRMDLADQPVLMFRNSANRALN
HHCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHCCCCCCEEEEECCCCCEEE
VVYRRSDGNIGWIDSSAAS
EEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430; 3034856 [H]