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The map label for this gene is rbsC [H]

Identifier: 148260846

GI number: 148260846

Start: 2043310

End: 2044302

Strand: Reverse

Name: rbsC [H]

Synonym: Acry_1852

Alternate gene names: 148260846

Gene position: 2044302-2043310 (Counterclockwise)

Preceding gene: 148260847

Following gene: 148260844

Centisome position: 60.32

GC content: 67.07

Gene sequence:

>993_bases
ATGGACCAGCAGGCACGAACAGCCGCGCTCGACGTCGAGACCATTCCGCGCGGGCGCATGCTGTGGCGCTTCGTCCGCCA
GATCGCCTTCGCGCTGATCAGCATCGTGGTGCTGGTCGTCGCGTTCGGCGTGCTGAACCCCCGCTTCCTGAGCGGGGGAA
ACTGGTTCCACATCGCCCAGCAGGTCGCGGTGATCGCGATCCTGGCGACGGGGCAGACCTTCATCATCGCGACCGCCGGG
ATCGACATCTCGCAGGGCTCGGTGGTCGCGCTGTCGTCGATGATCTGCGCGATCGCGATCGTTGATGCGCACATGTCGTC
CGGGGTGGCGATCGTGCTGACGCTGGCGCTGGGGGCGGTAATCGGCGCGATCATCGGACTGTCGGTGGTCGTGCTCGGCG
TGCCGCCCTTCATCGCGACGCTGGGCATGCTCGCGGTCGCACTCGGCGCGGCGCTGCTGACCACCAACGGCACGCCGGTG
TTCGGCCTGCCGAACGGGTTCCAGGAGATTTCGCAAGGCACCGTGCTGGGCTTTCCCAACATGGCGTGGATCGCGGTGCT
GCTCGCGCTGTTCTCGGCCTATCTGCTGAACAAGACGCGGTTCGGCCGCTACACGCTGGCGATCGGCAGCAATGCCGAGG
CGGCGCGGCGGGTGGGCATCAACGTGCCGCGGCATCTGCTGCTGGTCTATGTGTTCGGCGGGATCGTCTCGTCGCTCGCC
GGCGTGATCTATCTCGCCTACACGGCGGCGGCGCAGCCGACCTCGGGGGCGAATTACGAACTCTATGCGATCGCCGCGGT
GGTGATCGGCGGCGGGTCGCTGTTCGGCGGGGTGGGGACGATCCTCGGCAGCATCCTCGGCGCGCTGCTGATGACGATCC
TGAAGAACGGCACGCAGCTGGCGGGGATTTCACCCTATGTCGAGCAGGTGATTCTCGGGATCGTGGTGGTCGGCGCCGTC
TATGTCGACAATCTGCGGCGGCGGCTGCGCTGA

Upstream 100 bases:

>100_bases
CTGCTGACGCCGAAGAATCTCGGCTCCAGCCAGGCGACGGCGGCGATCCGCCAGTACGCGCCCAAGTATAACCCCGCGGG
CTGAGGGAGACTGGCGGACG

Downstream 100 bases:

>100_bases
GCTGAAGGCCGCCGGCCGGATGCGGGCATCCGGCCGGTCGGGGCAGGCGGTCAGGCGAGGTCGAAGCGGTCGAGCTCCAT
GACCTTGGTCCAGGCGGCGA

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MDQQARTAALDVETIPRGRMLWRFVRQIAFALISIVVLVVAFGVLNPRFLSGGNWFHIAQQVAVIAILATGQTFIIATAG
IDISQGSVVALSSMICAIAIVDAHMSSGVAIVLTLALGAVIGAIIGLSVVVLGVPPFIATLGMLAVALGAALLTTNGTPV
FGLPNGFQEISQGTVLGFPNMAWIAVLLALFSAYLLNKTRFGRYTLAIGSNAEAARRVGINVPRHLLLVYVFGGIVSSLA
GVIYLAYTAAAQPTSGANYELYAIAAVVIGGGSLFGGVGTILGSILGALLMTILKNGTQLAGISPYVEQVILGIVVVGAV
YVDNLRRRLR

Sequences:

>Translated_330_residues
MDQQARTAALDVETIPRGRMLWRFVRQIAFALISIVVLVVAFGVLNPRFLSGGNWFHIAQQVAVIAILATGQTFIIATAG
IDISQGSVVALSSMICAIAIVDAHMSSGVAIVLTLALGAVIGAIIGLSVVVLGVPPFIATLGMLAVALGAALLTTNGTPV
FGLPNGFQEISQGTVLGFPNMAWIAVLLALFSAYLLNKTRFGRYTLAIGSNAEAARRVGINVPRHLLLVYVFGGIVSSLA
GVIYLAYTAAAQPTSGANYELYAIAAVVIGGGSLFGGVGTILGSILGALLMTILKNGTQLAGISPYVEQVILGIVVVGAV
YVDNLRRRLR
>Mature_330_residues
MDQQARTAALDVETIPRGRMLWRFVRQIAFALISIVVLVVAFGVLNPRFLSGGNWFHIAQQVAVIAILATGQTFIIATAG
IDISQGSVVALSSMICAIAIVDAHMSSGVAIVLTLALGAVIGAIIGLSVVVLGVPPFIATLGMLAVALGAALLTTNGTPV
FGLPNGFQEISQGTVLGFPNMAWIAVLLALFSAYLLNKTRFGRYTLAIGSNAEAARRVGINVPRHLLLVYVFGGIVSSLA
GVIYLAYTAAAQPTSGANYELYAIAAVVIGGGSLFGGVGTILGSILGALLMTILKNGTQLAGISPYVEQVILGIVVVGAV
YVDNLRRRLR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=304, Percent_Identity=42.7631578947368, Blast_Score=188, Evalue=5e-49,
Organism=Escherichia coli, GI1790524, Length=296, Percent_Identity=34.4594594594595, Blast_Score=148, Evalue=6e-37,
Organism=Escherichia coli, GI1788896, Length=311, Percent_Identity=33.4405144694534, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI145693152, Length=299, Percent_Identity=30.7692307692308, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787793, Length=295, Percent_Identity=32.2033898305085, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1789992, Length=363, Percent_Identity=31.129476584022, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI87082395, Length=277, Percent_Identity=32.4909747292419, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1787794, Length=322, Percent_Identity=33.5403726708075, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI145693214, Length=259, Percent_Identity=36.2934362934363, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788471, Length=308, Percent_Identity=33.4415584415584, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34230; Mature: 34230

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQQARTAALDVETIPRGRMLWRFVRQIAFALISIVVLVVAFGVLNPRFLSGGNWFHIAQ
CCCCHHHHEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHH
QVAVIAILATGQTFIIATAGIDISQGSVVALSSMICAIAIVDAHMSSGVAIVLTLALGAV
HHHHHHHEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IGAIIGLSVVVLGVPPFIATLGMLAVALGAALLTTNGTPVFGLPNGFQEISQGTVLGFPN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCEECCCC
MAWIAVLLALFSAYLLNKTRFGRYTLAIGSNAEAARRVGINVPRHLLLVYVFGGIVSSLA
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GVIYLAYTAAAQPTSGANYELYAIAAVVIGGGSLFGGVGTILGSILGALLMTILKNGTQL
HHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AGISPYVEQVILGIVVVGAVYVDNLRRRLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDQQARTAALDVETIPRGRMLWRFVRQIAFALISIVVLVVAFGVLNPRFLSGGNWFHIAQ
CCCCHHHHEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHH
QVAVIAILATGQTFIIATAGIDISQGSVVALSSMICAIAIVDAHMSSGVAIVLTLALGAV
HHHHHHHEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IGAIIGLSVVVLGVPPFIATLGMLAVALGAALLTTNGTPVFGLPNGFQEISQGTVLGFPN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCEECCCC
MAWIAVLLALFSAYLLNKTRFGRYTLAIGSNAEAARRVGINVPRHLLLVYVFGGIVSSLA
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GVIYLAYTAAAQPTSGANYELYAIAAVVIGGGSLFGGVGTILGSILGALLMTILKNGTQL
HHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AGISPYVEQVILGIVVVGAVYVDNLRRRLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]