| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260825
Identifier: 148260825
GI number: 148260825
Start: 2020749
End: 2021900
Strand: Reverse
Name: 148260825
Synonym: Acry_1831
Alternate gene names: NA
Gene position: 2021900-2020749 (Counterclockwise)
Preceding gene: 148260826
Following gene: 148260817
Centisome position: 59.66
GC content: 59.2
Gene sequence:
>1152_bases ATGGGCGTGCCGCTGAAGCAGGCGATCAAGGTTGGAGCCTACGTGCTGAAACAGCATTTGACCGGCAATCGGCGGTATCC GCTGGTGCTGATGCTGGAGCCGCTGTTCCGCTGTAACCTGGCTTGCGCCGGTTGCGGCAAGATCGATTATCCCGCACCGA TTCTGAATCAGCGCCTGTCGGTTGCCGACGCGCTGGAAGCCGTGGATGAGTGTGGCGCTCCGGTTGTGGCGATTGCTGGC GGCGAGCCGCTGCTGCACCGGGAAATGCCCGAGATCGTCGAGAAGATCCTGGCGCGGGACAAGTTCATCTATCTCTGCAC GAATGCGCTGCTGCTCGAGAAGAAGATCGACCAGTACAAGCCGCACCCGAATTTCTGCTGGGACATTCATCTCGACGGCG ATCGCGAGATGCATGACCAGGCGGTCAGTCAGGAAGGCGTCTACGAACGTGCCGTTGCCGCGATCAAACTGGCCAAGGCA AAGGGATTCCGTGTTTCGATCAACTGCACATTGTTCGACGGAGCCAATCCCGAGCGGGTCGCCGCGTTCCTCGATACCGT GAACGAAATCGGCGTCGATGGGGTCATGACGTCCCCGGGTTATGCCTATGAGCGTGCCCCGGATCAGGAACATTTCCTTA ACCGTCAGCGGACGAAAGAACTTTTCCGGGCGATCTTCCGCCATGGAAAGGAGCGGAAGGCGCGCGGAATTCGCTGGAAA TTCAATCAGTCTCCCCTCTTTCTCGACTTCCTGGCCGGCAATCAGACCTACAAGTGCACGCCCTGGGGCAACCCGACGCG CAACGTGTTTGGTTGGCAGCGGCCTTGCTACCTAATCGGGGAAGGCTACGCAAAGACGTACAAGGAGCTGATGGAGACAA CCGATTGGGACAAATATGGTGTCGGCAATTATGAAAAATGCGCCGACTGCATGGTCCACTCGGGCTTCGAGGCGACTGCG GTGGTTGACTCGGTCAAGCGCCCCTGGAAATTGGCCAAGCTTGCGGTGACGGGGATCCGTACCGAAGGCGCCATGGCGGC AGATATCCCGCTTGATCATCAGCGGCCGGCGGAGTTTGTGTTCTCACGGCACGTCGAACACAAGATGGCGGAGATCCAGG GAACCGAGGAACCGGCCGAACCCGCGGAGTAA
Upstream 100 bases:
>100_bases CCTTGCCGGCACGCCGGAAGATGTCAGGTTCAAACTGCCCACCGAAGTGAGCGATGCCTGAACGGCGCATCGGCAGGTTG GGAAATATCAGGAGTTACCA
Downstream 100 bases:
>100_bases CCGGGGAACGGCCGTATCCCGCCCCTGTTGCGGTCATCCGGCGGCGCTTCGCTCGCGAGGCGCCGGCATGATGTTTTGTG CGGGGGCAGTTCTGGTCGGA
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Radical SAM Domain Protein; Fe-S Oxidoreductase; Molybdenum Cofactor Biosynthesis Protein A; MoaA/NifB/PqqE Family Protein; MoaA NifB PqqE Radical SAM Superfamily Protein; Co PQQ Synthesis Protein E; Co PQQ Synthesis Protein; Radical S-Adenosylmethionine Superfamily Protein; Iron-Sulfur Oxidoreductase; MoaA/NifB/PqqE Family Fe-S Oxidoreductase; Radical SAM Oxidoreductase; Heme D1 Biosynthesis Protein NirJ; Heme D1 Biosynthesis Protein; Hopanoid Biosynthesis Associated Radical SAM Protein; Heme Biosynthesis Protein; Radical SAM Protein; Radical SAM Superfamily; Radical SAM; Radical SAM Family Fe-S Protein
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MGVPLKQAIKVGAYVLKQHLTGNRRYPLVLMLEPLFRCNLACAGCGKIDYPAPILNQRLSVADALEAVDECGAPVVAIAG GEPLLHREMPEIVEKILARDKFIYLCTNALLLEKKIDQYKPHPNFCWDIHLDGDREMHDQAVSQEGVYERAVAAIKLAKA KGFRVSINCTLFDGANPERVAAFLDTVNEIGVDGVMTSPGYAYERAPDQEHFLNRQRTKELFRAIFRHGKERKARGIRWK FNQSPLFLDFLAGNQTYKCTPWGNPTRNVFGWQRPCYLIGEGYAKTYKELMETTDWDKYGVGNYEKCADCMVHSGFEATA VVDSVKRPWKLAKLAVTGIRTEGAMAADIPLDHQRPAEFVFSRHVEHKMAEIQGTEEPAEPAE
Sequences:
>Translated_383_residues MGVPLKQAIKVGAYVLKQHLTGNRRYPLVLMLEPLFRCNLACAGCGKIDYPAPILNQRLSVADALEAVDECGAPVVAIAG GEPLLHREMPEIVEKILARDKFIYLCTNALLLEKKIDQYKPHPNFCWDIHLDGDREMHDQAVSQEGVYERAVAAIKLAKA KGFRVSINCTLFDGANPERVAAFLDTVNEIGVDGVMTSPGYAYERAPDQEHFLNRQRTKELFRAIFRHGKERKARGIRWK FNQSPLFLDFLAGNQTYKCTPWGNPTRNVFGWQRPCYLIGEGYAKTYKELMETTDWDKYGVGNYEKCADCMVHSGFEATA VVDSVKRPWKLAKLAVTGIRTEGAMAADIPLDHQRPAEFVFSRHVEHKMAEIQGTEEPAEPAE >Mature_382_residues GVPLKQAIKVGAYVLKQHLTGNRRYPLVLMLEPLFRCNLACAGCGKIDYPAPILNQRLSVADALEAVDECGAPVVAIAGG EPLLHREMPEIVEKILARDKFIYLCTNALLLEKKIDQYKPHPNFCWDIHLDGDREMHDQAVSQEGVYERAVAAIKLAKAK GFRVSINCTLFDGANPERVAAFLDTVNEIGVDGVMTSPGYAYERAPDQEHFLNRQRTKELFRAIFRHGKERKARGIRWKF NQSPLFLDFLAGNQTYKCTPWGNPTRNVFGWQRPCYLIGEGYAKTYKELMETTDWDKYGVGNYEKCADCMVHSGFEATAV VDSVKRPWKLAKLAVTGIRTEGAMAADIPLDHQRPAEFVFSRHVEHKMAEIQGTEEPAEPAE
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43117; Mature: 42986
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVPLKQAIKVGAYVLKQHLTGNRRYPLVLMLEPLFRCNLACAGCGKIDYPAPILNQRLS CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCEECCCCCCCCCCHHHHHHHH VADALEAVDECGAPVVAIAGGEPLLHREMPEIVEKILARDKFIYLCTNALLLEKKIDQYK HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCC PHPNFCWDIHLDGDREMHDQAVSQEGVYERAVAAIKLAKAKGFRVSINCTLFDGANPERV CCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHH AAFLDTVNEIGVDGVMTSPGYAYERAPDQEHFLNRQRTKELFRAIFRHGKERKARGIRWK HHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEE FNQSPLFLDFLAGNQTYKCTPWGNPTRNVFGWQRPCYLIGEGYAKTYKELMETTDWDKYG ECCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCC VGNYEKCADCMVHSGFEATAVVDSVKRPWKLAKLAVTGIRTEGAMAADIPLDHQRPAEFV CCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHEEECCCCCEEECCCCCCCCHHHHH FSRHVEHKMAEIQGTEEPAEPAE HHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GVPLKQAIKVGAYVLKQHLTGNRRYPLVLMLEPLFRCNLACAGCGKIDYPAPILNQRLS CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCEECCCCCCCCCCHHHHHHHH VADALEAVDECGAPVVAIAGGEPLLHREMPEIVEKILARDKFIYLCTNALLLEKKIDQYK HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCC PHPNFCWDIHLDGDREMHDQAVSQEGVYERAVAAIKLAKAKGFRVSINCTLFDGANPERV CCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHH AAFLDTVNEIGVDGVMTSPGYAYERAPDQEHFLNRQRTKELFRAIFRHGKERKARGIRWK HHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEE FNQSPLFLDFLAGNQTYKCTPWGNPTRNVFGWQRPCYLIGEGYAKTYKELMETTDWDKYG ECCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCC VGNYEKCADCMVHSGFEATAVVDSVKRPWKLAKLAVTGIRTEGAMAADIPLDHQRPAEFV CCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHEEECCCCCEEECCCCCCCCHHHHH FSRHVEHKMAEIQGTEEPAEPAE HHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA