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The map label for this gene is ygcL [C]

Identifier: 148260807

GI number: 148260807

Start: 1995341

End: 1996930

Strand: Reverse

Name: ygcL [C]

Synonym: Acry_1813

Alternate gene names: 148260807

Gene position: 1996930-1995341 (Counterclockwise)

Preceding gene: 148260808

Following gene: 148260806

Centisome position: 58.92

GC content: 61.01

Gene sequence:

>1590_bases
ATGTTTAACCTCTTGACTAATCCATGGCTCCCCATTGTCCGTCAGGACGGCACGAAAAGTGTCATCGCTCCTCGGGACAT
CACGGAGGATATTTCCTCGAACCCAGTCATTGCCGTCAACTGGCCGCGCGCTGATTTTCGTCTCGCCACGATGGAATTGC
TGGTTGGCCTAATCGCCACGGCCTGCCCTCCGGCAGATGAGGATGATTGGCTCGACGCCTGGGAGGCTCCACATTCGCCT
GAAAAGTTGGACGGTGCCTTCGCGCCATTGGCCCATGCATTCAGCTTCGACGGCCCTGGGCCCCGCTTCATGCAAGATCT
TGCGGATCTCGACGCTGATGAAGAGCCCGTGGAAAATCTGCTAATCGAGGTGGCCGGTAATTCCGGTCCCCTCGTTCATC
CGGGACGCACCAAGCGGATGGGCAGGCCGGCGGCAGCAATCTCCCTTTACACGCTGCAATCATGGTCGCCCTCCGGCGGG
AGGGGTAACCGTACCGGCTTGCGGGGAGGGGGACCGATGGTCACCATGGTGGCGCCAGGCCGGCATCGATCTCTCTGGCA
CCACATCTGGGCCAATGTGCCGCTCGGACGAAAGCCCGAGCCGGTAGACTTTCCTCGTATCTTTCCTTGGCTCTCGCCAA
CGATCACATCCGTGAACGATGAGGTCGTAACGCCGGATGATGTCGCCCACCCCCTGCAAGTCTGGTGGGGTATGCCGCGG
CGTATCAGGCTCAGCTTCGTTCAGCTGCCTTCACCTGCCCCCTGCGACCTGACAGGTGCTTTGGACTCGAGCGTTGTCAC
CGGATGGCGGCAGCGCCCCCACGGGCCAAAGTATGTCGGGTGGGGAGCGAGACATCCCCTCACACCAACCTATCAGAACA
AGGCTGGAGAAGAGATTTTATCGGTCCACCCTAACCCTGGTGGAGTCGGTTACCGAAACTGGATTGGTCTTGTTCTCCGC
AGCCCGGACGGCCTGCGCCGGCCGGCACCCATCGTCTCTACCTGGCGGAATGACCGCTACCGCGGCACGGAAGAGGCCAA
AGGTGCCCGCCTGATCGCTGGCGGCTATGACACGGACAACATGAAGGCGCGAGGTTTCATGGAGACCGAGGTCCCGCTGG
TCCTGGCGAGCTCGAAGGAGGTGCAGGAACGTCTGGACGCACTAGCCACATCGCTCGTCCGTGCCAGCGAGCGGGCCAGC
TACCAGCTCCGCAAGGCTGTGCAACAGGCACTTTATCATCCAGGCGCGAAGGTCAAAGCCACGGCTCATGGGATCGCGCT
TCTGGGGGACCGCGTTTGGCTGGAGACGGAGAGCGCGTTCTTCAGTGCTTTGGACCGCGCGATGAGCCTTGACGATACGG
CGCCAGAACGGGTCGCATGGCAGGTGCGCCTTAGAGGTCTCGCGCTGCGCATCTTCGACGACACCGTGCCGATTGATCCA
CTGGACAGGAACAATGCTCGGCAGGTCAGAGCGCGCTTTTTCCTCGGGCTCGGCCTTAGTGGCTACGGCAAAGACGGCCA
GTCCTTTTTCCAGATCCTGGAAATGCCCCTGCCAGCCCAGGAAAAAAAGTCGAAAGGAAAGGCTTCATGA

Upstream 100 bases:

>100_bases
CTCAGATACCGGATAGCGCCGCATATTCAGTGACGTGATCCTGCGGCCGTAAAATAGATTCGTGCCTTTCTGTATAATAA
AATGCGAGGTCTAAGCTTTC

Downstream 100 bases:

>100_bases
TCCGTTATCGATCGGCCGCCCATGACTGGTGGCGGGATCTCGTTCCGCGCGCAGGCTACCCCGGTGACCGTGCTGCGCTC
GCCAAGCTTCGCCGCGCTTC

Product: CRISPR-associated Cse1 family protein

Products: NA

Alternate protein names: CRISPR-Associated Cse1 Family Protein; Cse1 Family CRISPR-Associated Protein; Cytoplasmic Protein; CRISPR-Associated Protein; Crispr-Associated Protein Cse1 Family

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MFNLLTNPWLPIVRQDGTKSVIAPRDITEDISSNPVIAVNWPRADFRLATMELLVGLIATACPPADEDDWLDAWEAPHSP
EKLDGAFAPLAHAFSFDGPGPRFMQDLADLDADEEPVENLLIEVAGNSGPLVHPGRTKRMGRPAAAISLYTLQSWSPSGG
RGNRTGLRGGGPMVTMVAPGRHRSLWHHIWANVPLGRKPEPVDFPRIFPWLSPTITSVNDEVVTPDDVAHPLQVWWGMPR
RIRLSFVQLPSPAPCDLTGALDSSVVTGWRQRPHGPKYVGWGARHPLTPTYQNKAGEEILSVHPNPGGVGYRNWIGLVLR
SPDGLRRPAPIVSTWRNDRYRGTEEAKGARLIAGGYDTDNMKARGFMETEVPLVLASSKEVQERLDALATSLVRASERAS
YQLRKAVQQALYHPGAKVKATAHGIALLGDRVWLETESAFFSALDRAMSLDDTAPERVAWQVRLRGLALRIFDDTVPIDP
LDRNNARQVRARFFLGLGLSGYGKDGQSFFQILEMPLPAQEKKSKGKAS

Sequences:

>Translated_529_residues
MFNLLTNPWLPIVRQDGTKSVIAPRDITEDISSNPVIAVNWPRADFRLATMELLVGLIATACPPADEDDWLDAWEAPHSP
EKLDGAFAPLAHAFSFDGPGPRFMQDLADLDADEEPVENLLIEVAGNSGPLVHPGRTKRMGRPAAAISLYTLQSWSPSGG
RGNRTGLRGGGPMVTMVAPGRHRSLWHHIWANVPLGRKPEPVDFPRIFPWLSPTITSVNDEVVTPDDVAHPLQVWWGMPR
RIRLSFVQLPSPAPCDLTGALDSSVVTGWRQRPHGPKYVGWGARHPLTPTYQNKAGEEILSVHPNPGGVGYRNWIGLVLR
SPDGLRRPAPIVSTWRNDRYRGTEEAKGARLIAGGYDTDNMKARGFMETEVPLVLASSKEVQERLDALATSLVRASERAS
YQLRKAVQQALYHPGAKVKATAHGIALLGDRVWLETESAFFSALDRAMSLDDTAPERVAWQVRLRGLALRIFDDTVPIDP
LDRNNARQVRARFFLGLGLSGYGKDGQSFFQILEMPLPAQEKKSKGKAS
>Mature_529_residues
MFNLLTNPWLPIVRQDGTKSVIAPRDITEDISSNPVIAVNWPRADFRLATMELLVGLIATACPPADEDDWLDAWEAPHSP
EKLDGAFAPLAHAFSFDGPGPRFMQDLADLDADEEPVENLLIEVAGNSGPLVHPGRTKRMGRPAAAISLYTLQSWSPSGG
RGNRTGLRGGGPMVTMVAPGRHRSLWHHIWANVPLGRKPEPVDFPRIFPWLSPTITSVNDEVVTPDDVAHPLQVWWGMPR
RIRLSFVQLPSPAPCDLTGALDSSVVTGWRQRPHGPKYVGWGARHPLTPTYQNKAGEEILSVHPNPGGVGYRNWIGLVLR
SPDGLRRPAPIVSTWRNDRYRGTEEAKGARLIAGGYDTDNMKARGFMETEVPLVLASSKEVQERLDALATSLVRASERAS
YQLRKAVQQALYHPGAKVKATAHGIALLGDRVWLETESAFFSALDRAMSLDDTAPERVAWQVRLRGLALRIFDDTVPIDP
LDRNNARQVRARFFLGLGLSGYGKDGQSFFQILEMPLPAQEKKSKGKAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789118, Length=178, Percent_Identity=28.0898876404494, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58303; Mature: 58303

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNLLTNPWLPIVRQDGTKSVIAPRDITEDISSNPVIAVNWPRADFRLATMELLVGLIAT
CCCCCCCCCCCEEECCCCCCEECCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
ACPPADEDDWLDAWEAPHSPEKLDGAFAPLAHAFSFDGPGPRFMQDLADLDADEEPVENL
CCCCCCCCCHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHH
LIEVAGNSGPLVHPGRTKRMGRPAAAISLYTLQSWSPSGGRGNRTGLRGGGPMVTMVAPG
EEEECCCCCCEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCC
RHRSLWHHIWANVPLGRKPEPVDFPRIFPWLSPTITSVNDEVVTPDDVAHPLQVWWGMPR
CHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCCHHHCCHHHHHHCCCC
RIRLSFVQLPSPAPCDLTGALDSSVVTGWRQRPHGPKYVGWGARHPLTPTYQNKAGEEIL
EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCE
SVHPNPGGVGYRNWIGLVLRSPDGLRRPAPIVSTWRNDRYRGTEEAKGARLIAGGYDTDN
EECCCCCCCCHHHEEEEEEECCCCCCCCCCHHHHCCCCCCCCCHHCCCCEEEECCCCCCC
MKARGFMETEVPLVLASSKEVQERLDALATSLVRASERASYQLRKAVQQALYHPGAKVKA
CCCCCEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
TAHGIALLGDRVWLETESAFFSALDRAMSLDDTAPERVAWQVRLRGLALRIFDDTVPIDP
ECCCEEEECCEEEEECHHHHHHHHHHHHCCCCCCHHHHEEEEEECEEEEEEECCCCCCCC
LDRNNARQVRARFFLGLGLSGYGKDGQSFFQILEMPLPAQEKKSKGKAS
CCCCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCC
>Mature Secondary Structure
MFNLLTNPWLPIVRQDGTKSVIAPRDITEDISSNPVIAVNWPRADFRLATMELLVGLIAT
CCCCCCCCCCCEEECCCCCCEECCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
ACPPADEDDWLDAWEAPHSPEKLDGAFAPLAHAFSFDGPGPRFMQDLADLDADEEPVENL
CCCCCCCCCHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHH
LIEVAGNSGPLVHPGRTKRMGRPAAAISLYTLQSWSPSGGRGNRTGLRGGGPMVTMVAPG
EEEECCCCCCEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCC
RHRSLWHHIWANVPLGRKPEPVDFPRIFPWLSPTITSVNDEVVTPDDVAHPLQVWWGMPR
CHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCCHHHCCHHHHHHCCCC
RIRLSFVQLPSPAPCDLTGALDSSVVTGWRQRPHGPKYVGWGARHPLTPTYQNKAGEEIL
EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCE
SVHPNPGGVGYRNWIGLVLRSPDGLRRPAPIVSTWRNDRYRGTEEAKGARLIAGGYDTDN
EECCCCCCCCHHHEEEEEEECCCCCCCCCCHHHHCCCCCCCCCHHCCCCEEEECCCCCCC
MKARGFMETEVPLVLASSKEVQERLDALATSLVRASERASYQLRKAVQQALYHPGAKVKA
CCCCCEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
TAHGIALLGDRVWLETESAFFSALDRAMSLDDTAPERVAWQVRLRGLALRIFDDTVPIDP
ECCCEEEECCEEEEECHHHHHHHHHHHHCCCCCCHHHHEEEEEECEEEEEEECCCCCCCC
LDRNNARQVRARFFLGLGLSGYGKDGQSFFQILEMPLPAQEKKSKGKAS
CCCCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA