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The map label for this gene is ygcB [H]

Identifier: 148260808

GI number: 148260808

Start: 1997220

End: 1999325

Strand: Reverse

Name: ygcB [H]

Synonym: Acry_1814

Alternate gene names: 148260808

Gene position: 1999325-1997220 (Counterclockwise)

Preceding gene: 148260809

Following gene: 148260807

Centisome position: 58.99

GC content: 63.11

Gene sequence:

>2106_bases
ATGCAATGGCAGATTGCCGGCTTTCTCACTCTTGCTGATTGGATTGGATCAAACGAAATCTGGTTCCCGCGCGATGGGAC
CCACAGCGATCTCGATCCGCACGATTATTTCCGAGAAGTAGCGCTGCCGCGCGCCGCCCAAGCTGGTGCGGACGCCGGAC
TGACCCCCTCCAAGGCGCGCACTTTCACTGGTTTCTCCGCACTGTTCCCGAAGGTCGACACACCGTCTCCGGCACAATCA
TGGGCCGAGACAGTGCCGCTGCCGGAGGGGGCAGTGCTCGCAATCATCGAAGACCTGACCGGCAGTGGGAAAACCGAGGC
GGCCCTTACGCTTGCCAGCCGTATAATGGCATCGGGAGAGGCAAGGGGTGTCTTCTTTGCCCTGCCGAGCATGGCGACCG
CCAATTCCATGTTCCAGAGGCTGACCGATACCTACCTGCGCCTGTTTGAAGAGGGCTCGCGGCCATCGATCGCACTGACG
CACGGGAAGGCCGGTCTGGATCCTCGTTTCCGTGCGCTGATATCAGCCTCCCCCTCCTCGGCTTCAGAGCCACGGGAGGG
GGAGGCGATTCCGTCAGAAGCGGAGTGCAAAGCCTGGCTCGCGGAAGATCGGAGGCGTTCCCTCTTTGCCGATGTCGGCA
TAGGCACCATCGATCAGGCTCTCCTCGCCGTCTTGCCCGTACGCCACGCGCCGCTCCGGCTGCATGGCTTGCAGGGCAAG
GTTCTTGTCGTGGACGAGGTACATGCATTCGATTCCTATATGGAGCGCGAATTGCAGGCGCTGCTCGAGTTTCATGCCGC
ACTGGGTGGGTCCGCGATACTGCTTTCCGCCACTCTCCCGCTGAGGATGCGGCAATCGCTGACTGACGCGTTCCGCCGTG
GCGCCGGCCAGGAAGCCCCTCGCCAGGTTACATCGACACACTACCCGCTCGCCACGATCGAGGGATCTGAAGCCCAGACC
GAGTATCCGTTGGGCGTCCGGACGGGCCTCCCTCGGTCAGTCACCATTACGCGGGTAGACACTGAGGTGGACGCCCTTTC
CAGGGTTGTGGATGCCGCAAGGCTTGGCGCTGCCGTAGTCTGGATCCGAAACAGCGTTGATGATGCGCTTGAAGCCGCCG
CGGCGGTGCGCATGGAGAACATCGACCCGATCGTCTTCCACGCTCGTTTTGCGCACATCGATCGGCAGTCGGTGGAACAG
GAGGTGCTGCGCCGGTTCGGCAAGGACAGTATCGGGCATGCGCGCGCCGGCGTCCTGATCGCCACGCAGGTCGTCGAGCA
GTCCCTGGATCTGGATTTTGATCTGCTTGTGACAGACCTGGCGCCGGTGGATAGTCTCATCCAGAGGGCAGGGCGGCTCT
GGCGCCACAGTCGCGGACCGCGAGTCATCGAGCGTCCTGAGATGGTTGTCCTCTCGCCGACCCCATCAATGGCGTCAGGC
CCGGGCTGGCTGGATTCCTTGCTGCCAAGGACGAACGCTGTCTACCAGAATCCGGCATTGCTGTGGCGCAGCGCCCGGGC
GCTATTCGCCAAATCCGACCTCGTTACACCCGATGATATGCGCCTCCTGATCGAGGCGGTGGATGACGTGGAGGATACGC
CGCCGGGCCTCAAGATGGCGGCGGACGGAGCCTGGGCAAAGCATCTGAGCCACCGTGCGTTTGCGGCCGGCGCCGTCCTG
GATTTCGACGAGGGGTATACGCTCCAATCCGGTGCCTGGGACAGGGAAACCCGGACACCGACCCGACTTGAGGAGCGCGA
GCAGGCCACGCTTCGCCTGGCTCGCGTCAAGGATGGAAAGGTGGTGCCCTATGCTGGGCTTGCGGGAGACTTGCGGCAGG
CGTGGACGCTATCCGAAGTGAGGGTCCAGCGGTATCGGATAGCAGCCTGCCCACCACCGGCGGGATACTCCGAAGCGGTG
AACGAGGCGCGGAGCCAATGGGGCCGCTGGGAGCGCGAGAGTCCCCATATACTGCTCGCCATTCTCGAGGTGACGAAGCA
GGAGGGCCGGTTTATGCTGCAAGGAGAAAATCCGGACGGCCATCCCGTATCAGCTGTCTACGATGCCACTGATGGCCTGA
GGTGGCTTCCCGCATCCGCGGGATGA

Upstream 100 bases:

>100_bases
CCAATGCCTGGACGCCGCGCGGGAGTTCGTGCAGGCGATGCTCGATCTTTTCCAGCCGTCTCCCTTGCCGCCACCTCAAA
GCCGGCGGGCCAGTGCACGG

Downstream 100 bases:

>100_bases
CCCGCGTGATGACCTGTCATTGGTCTTCGCACCGAGATGTTCCCTGCAGGCGCGGGGCGGCTTTTTTGACGAAAACCAAC
GTCTGTTCGATTAAAACAAA

Product: CRISPR-associated helicase Cas3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 701; Mature: 701

Protein sequence:

>701_residues
MQWQIAGFLTLADWIGSNEIWFPRDGTHSDLDPHDYFREVALPRAAQAGADAGLTPSKARTFTGFSALFPKVDTPSPAQS
WAETVPLPEGAVLAIIEDLTGSGKTEAALTLASRIMASGEARGVFFALPSMATANSMFQRLTDTYLRLFEEGSRPSIALT
HGKAGLDPRFRALISASPSSASEPREGEAIPSEAECKAWLAEDRRRSLFADVGIGTIDQALLAVLPVRHAPLRLHGLQGK
VLVVDEVHAFDSYMERELQALLEFHAALGGSAILLSATLPLRMRQSLTDAFRRGAGQEAPRQVTSTHYPLATIEGSEAQT
EYPLGVRTGLPRSVTITRVDTEVDALSRVVDAARLGAAVVWIRNSVDDALEAAAAVRMENIDPIVFHARFAHIDRQSVEQ
EVLRRFGKDSIGHARAGVLIATQVVEQSLDLDFDLLVTDLAPVDSLIQRAGRLWRHSRGPRVIERPEMVVLSPTPSMASG
PGWLDSLLPRTNAVYQNPALLWRSARALFAKSDLVTPDDMRLLIEAVDDVEDTPPGLKMAADGAWAKHLSHRAFAAGAVL
DFDEGYTLQSGAWDRETRTPTRLEEREQATLRLARVKDGKVVPYAGLAGDLRQAWTLSEVRVQRYRIAACPPPAGYSEAV
NEARSQWGRWERESPHILLAILEVTKQEGRFMLQGENPDGHPVSAVYDATDGLRWLPASAG

Sequences:

>Translated_701_residues
MQWQIAGFLTLADWIGSNEIWFPRDGTHSDLDPHDYFREVALPRAAQAGADAGLTPSKARTFTGFSALFPKVDTPSPAQS
WAETVPLPEGAVLAIIEDLTGSGKTEAALTLASRIMASGEARGVFFALPSMATANSMFQRLTDTYLRLFEEGSRPSIALT
HGKAGLDPRFRALISASPSSASEPREGEAIPSEAECKAWLAEDRRRSLFADVGIGTIDQALLAVLPVRHAPLRLHGLQGK
VLVVDEVHAFDSYMERELQALLEFHAALGGSAILLSATLPLRMRQSLTDAFRRGAGQEAPRQVTSTHYPLATIEGSEAQT
EYPLGVRTGLPRSVTITRVDTEVDALSRVVDAARLGAAVVWIRNSVDDALEAAAAVRMENIDPIVFHARFAHIDRQSVEQ
EVLRRFGKDSIGHARAGVLIATQVVEQSLDLDFDLLVTDLAPVDSLIQRAGRLWRHSRGPRVIERPEMVVLSPTPSMASG
PGWLDSLLPRTNAVYQNPALLWRSARALFAKSDLVTPDDMRLLIEAVDDVEDTPPGLKMAADGAWAKHLSHRAFAAGAVL
DFDEGYTLQSGAWDRETRTPTRLEEREQATLRLARVKDGKVVPYAGLAGDLRQAWTLSEVRVQRYRIAACPPPAGYSEAV
NEARSQWGRWERESPHILLAILEVTKQEGRFMLQGENPDGHPVSAVYDATDGLRWLPASAG
>Mature_701_residues
MQWQIAGFLTLADWIGSNEIWFPRDGTHSDLDPHDYFREVALPRAAQAGADAGLTPSKARTFTGFSALFPKVDTPSPAQS
WAETVPLPEGAVLAIIEDLTGSGKTEAALTLASRIMASGEARGVFFALPSMATANSMFQRLTDTYLRLFEEGSRPSIALT
HGKAGLDPRFRALISASPSSASEPREGEAIPSEAECKAWLAEDRRRSLFADVGIGTIDQALLAVLPVRHAPLRLHGLQGK
VLVVDEVHAFDSYMERELQALLEFHAALGGSAILLSATLPLRMRQSLTDAFRRGAGQEAPRQVTSTHYPLATIEGSEAQT
EYPLGVRTGLPRSVTITRVDTEVDALSRVVDAARLGAAVVWIRNSVDDALEAAAAVRMENIDPIVFHARFAHIDRQSVEQ
EVLRRFGKDSIGHARAGVLIATQVVEQSLDLDFDLLVTDLAPVDSLIQRAGRLWRHSRGPRVIERPEMVVLSPTPSMASG
PGWLDSLLPRTNAVYQNPALLWRSARALFAKSDLVTPDDMRLLIEAVDDVEDTPPGLKMAADGAWAKHLSHRAFAAGAVL
DFDEGYTLQSGAWDRETRTPTRLEEREQATLRLARVKDGKVVPYAGLAGDLRQAWTLSEVRVQRYRIAACPPPAGYSEAV
NEARSQWGRWERESPHILLAILEVTKQEGRFMLQGENPDGHPVSAVYDATDGLRWLPASAG

Specific function: Unknown

COG id: COG1203

COG function: function code R; Predicted helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789119, Length=719, Percent_Identity=31.8497913769124, Blast_Score=271, Evalue=7e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006483
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR006474
- InterPro:   IPR014021 [H]

Pfam domain/function: PF00270 DEAD [H]

EC number: NA

Molecular weight: Translated: 76584; Mature: 76584

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWQIAGFLTLADWIGSNEIWFPRDGTHSDLDPHDYFREVALPRAAQAGADAGLTPSKAR
CCEEEHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCH
TFTGFSALFPKVDTPSPAQSWAETVPLPEGAVLAIIEDLTGSGKTEAALTLASRIMASGE
HHCCHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHCCC
ARGVFFALPSMATANSMFQRLTDTYLRLFEEGSRPSIALTHGKAGLDPRFRALISASPSS
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCC
ASEPREGEAIPSEAECKAWLAEDRRRSLFADVGIGTIDQALLAVLPVRHAPLRLHGLQGK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCC
VLVVDEVHAFDSYMERELQALLEFHAALGGSAILLSATLPLRMRQSLTDAFRRGAGQEAP
EEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCC
RQVTSTHYPLATIEGSEAQTEYPLGVRTGLPRSVTITRVDTEVDALSRVVDAARLGAAVV
HHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCEEEE
WIRNSVDDALEAAAAVRMENIDPIVFHARFAHIDRQSVEQEVLRRFGKDSIGHARAGVLI
EECCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHH
ATQVVEQSLDLDFDLLVTDLAPVDSLIQRAGRLWRHSRGPRVIERPEMVVLSPTPSMASG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC
PGWLDSLLPRTNAVYQNPALLWRSARALFAKSDLVTPDDMRLLIEAVDDVEDTPPGLKMA
CCHHHHHCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE
ADGAWAKHLSHRAFAAGAVLDFDEGYTLQSGAWDRETRTPTRLEEREQATLRLARVKDGK
CCCHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHEEECCCC
VVPYAGLAGDLRQAWTLSEVRVQRYRIAACPPPAGYSEAVNEARSQWGRWERESPHILLA
EEECCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEH
ILEVTKQEGRFMLQGENPDGHPVSAVYDATDGLRWLPASAG
EEHHHHHCCCEEEECCCCCCCCCEEEEECCCCCEECCCCCC
>Mature Secondary Structure
MQWQIAGFLTLADWIGSNEIWFPRDGTHSDLDPHDYFREVALPRAAQAGADAGLTPSKAR
CCEEEHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCH
TFTGFSALFPKVDTPSPAQSWAETVPLPEGAVLAIIEDLTGSGKTEAALTLASRIMASGE
HHCCHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHCCC
ARGVFFALPSMATANSMFQRLTDTYLRLFEEGSRPSIALTHGKAGLDPRFRALISASPSS
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCC
ASEPREGEAIPSEAECKAWLAEDRRRSLFADVGIGTIDQALLAVLPVRHAPLRLHGLQGK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCC
VLVVDEVHAFDSYMERELQALLEFHAALGGSAILLSATLPLRMRQSLTDAFRRGAGQEAP
EEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCC
RQVTSTHYPLATIEGSEAQTEYPLGVRTGLPRSVTITRVDTEVDALSRVVDAARLGAAVV
HHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCEEEE
WIRNSVDDALEAAAAVRMENIDPIVFHARFAHIDRQSVEQEVLRRFGKDSIGHARAGVLI
EECCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHH
ATQVVEQSLDLDFDLLVTDLAPVDSLIQRAGRLWRHSRGPRVIERPEMVVLSPTPSMASG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC
PGWLDSLLPRTNAVYQNPALLWRSARALFAKSDLVTPDDMRLLIEAVDDVEDTPPGLKMA
CCHHHHHCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE
ADGAWAKHLSHRAFAAGAVLDFDEGYTLQSGAWDRETRTPTRLEEREQATLRLARVKDGK
CCCHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHEEECCCC
VVPYAGLAGDLRQAWTLSEVRVQRYRIAACPPPAGYSEAVNEARSQWGRWERESPHILLA
EEECCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEH
ILEVTKQEGRFMLQGENPDGHPVSAVYDATDGLRWLPASAG
EEHHHHHCCCEEEECCCCCCCCCEEEEECCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 2005873; 7984428 [H]