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The map label for this gene is ygbT [H]

Identifier: 148260802

GI number: 148260802

Start: 1991304

End: 1992266

Strand: Reverse

Name: ygbT [H]

Synonym: Acry_1808

Alternate gene names: 148260802

Gene position: 1992266-1991304 (Counterclockwise)

Preceding gene: 148260803

Following gene: 148260796

Centisome position: 58.78

GC content: 61.47

Gene sequence:

>963_bases
GTGTCTGATCAGGCGCCGGGTCTGCCGCCGCCGCGACCCATTCCAATTCGTGAACGCTCATCTATCCTGTTTCTCGAGCG
CGGACAGCTCGACGTGATCGATGGGAGCTTTGTTGTCGTCGACCAGCGTGGCATTCGGACCGTAATTCCGGTCGGCGGCA
TTACATGCCTGATGCTGGAGCCAGGCACACGTGTAAGCCATGCCGCTGTTTGCCTAGCTGCACGAGCGGGCACATTACTC
ATCTGGGTTGGAGAGGCTGGTGTGCGCCTCTACGCTGCCGGCCAGCCGGGTGGTGCGCGGTCCGACCGGCTACTCTATCA
GGCGCGACTTGCGCTCGATGATGAGGCTCGTCTCCGTGTCGTCCGAAGAATGTATTCTATCCGCTTCCAGGAAGAGCCGC
CCCAGCGCCGCTCTGTCGATCAACTGCGCGGCATTGAGGGCGTCCGCGTGCGGGAGCTCTATAAGCTGATGGCCCAGCGC
CATGGCGTCTCCTGGGCCGGGCGGCGTTACGACCCCCAGAACTGGGGTGGTGCTGATCTTGTCAATCGTTGTCTATCTGC
TGCGACAGCTGCCCTATACGGGATCTCGGAGGCGGCAATCCTGGCCGCCGGGTATGCGCCGGCGATCGGCTTTTTACATA
GTGGCAAGCCGCAAAGCTTTGTTTATGACATTGCGGATCTCTTCAAGTTCGAAACGGTCGTGCCGGAGGCATTCAAGGTA
GTGGCGGCAGTGCAATCTGGACGTGGACAGATTGATGGGATGGCGATCGGAGAACCTGTCGGCGCGGTCCGGCGGCGCTG
CCGCGATGCGTTCCGCCGCACAAATGTACTCGCACGCATCATTCCCGCTATCGAGGATGTGTTGGCAGCCGGCGGCTTGG
CAGTGCCAGAGGCGCCCGAAGAAGCGATGCCCGTTGCTATACCACCACCGGAACCGACGGGTGATGCTGGTCATCGTGGT
TGA

Upstream 100 bases:

>100_bases
GGAGTTTTAAGCGTCACCGATCCAGCGCGCTTCATCGCTGCCATTGGCCATGGCTTCGGGCGGGCGCGGGCCTTTGGCTG
TGGCCTCATGCTGATCCGCC

Downstream 100 bases:

>100_bases
GAACGCGCCGCCGCGTTTGCGAGGCCGACTAGGTGTCTGGCTTTTGGAAGTTCGAGCAGGCGTTTATGTAGGAAACTATG
GGCGCAAGGTTCGCGAGATG

Product: CRISPR-associated Cas1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSDQAPGLPPPRPIPIRERSSILFLERGQLDVIDGSFVVVDQRGIRTVIPVGGITCLMLEPGTRVSHAAVCLAARAGTLL
IWVGEAGVRLYAAGQPGGARSDRLLYQARLALDDEARLRVVRRMYSIRFQEEPPQRRSVDQLRGIEGVRVRELYKLMAQR
HGVSWAGRRYDPQNWGGADLVNRCLSAATAALYGISEAAILAAGYAPAIGFLHSGKPQSFVYDIADLFKFETVVPEAFKV
VAAVQSGRGQIDGMAIGEPVGAVRRRCRDAFRRTNVLARIIPAIEDVLAAGGLAVPEAPEEAMPVAIPPPEPTGDAGHRG

Sequences:

>Translated_320_residues
MSDQAPGLPPPRPIPIRERSSILFLERGQLDVIDGSFVVVDQRGIRTVIPVGGITCLMLEPGTRVSHAAVCLAARAGTLL
IWVGEAGVRLYAAGQPGGARSDRLLYQARLALDDEARLRVVRRMYSIRFQEEPPQRRSVDQLRGIEGVRVRELYKLMAQR
HGVSWAGRRYDPQNWGGADLVNRCLSAATAALYGISEAAILAAGYAPAIGFLHSGKPQSFVYDIADLFKFETVVPEAFKV
VAAVQSGRGQIDGMAIGEPVGAVRRRCRDAFRRTNVLARIIPAIEDVLAAGGLAVPEAPEEAMPVAIPPPEPTGDAGHRG
>Mature_319_residues
SDQAPGLPPPRPIPIRERSSILFLERGQLDVIDGSFVVVDQRGIRTVIPVGGITCLMLEPGTRVSHAAVCLAARAGTLLI
WVGEAGVRLYAAGQPGGARSDRLLYQARLALDDEARLRVVRRMYSIRFQEEPPQRRSVDQLRGIEGVRVRELYKLMAQRH
GVSWAGRRYDPQNWGGADLVNRCLSAATAALYGISEAAILAAGYAPAIGFLHSGKPQSFVYDIADLFKFETVVPEAFKVV
AAVQSGRGQIDGMAIGEPVGAVRRRCRDAFRRTNVLARIIPAIEDVLAAGGLAVPEAPEEAMPVAIPPPEPTGDAGHRG

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789113, Length=310, Percent_Identity=63.2258064516129, Blast_Score=402, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019851 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 34528; Mature: 34397

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQAPGLPPPRPIPIRERSSILFLERGQLDVIDGSFVVVDQRGIRTVIPVGGITCLMLE
CCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCEEEEECCCCEEEEECCCEEEEEEC
PGTRVSHAAVCLAARAGTLLIWVGEAGVRLYAAGQPGGARSDRLLYQARLALDDEARLRV
CCCCHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHH
VRRMYSIRFQEEPPQRRSVDQLRGIEGVRVRELYKLMAQRHGVSWAGRRYDPQNWGGADL
HHHHHHHCCCCCCCHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
VNRCLSAATAALYGISEAAILAAGYAPAIGFLHSGKPQSFVYDIADLFKFETVVPEAFKV
HHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VAAVQSGRGQIDGMAIGEPVGAVRRRCRDAFRRTNVLARIIPAIEDVLAAGGLAVPEAPE
HHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EAMPVAIPPPEPTGDAGHRG
CCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SDQAPGLPPPRPIPIRERSSILFLERGQLDVIDGSFVVVDQRGIRTVIPVGGITCLMLE
CCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCEEEEECCCCEEEEECCCEEEEEEC
PGTRVSHAAVCLAARAGTLLIWVGEAGVRLYAAGQPGGARSDRLLYQARLALDDEARLRV
CCCCHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHH
VRRMYSIRFQEEPPQRRSVDQLRGIEGVRVRELYKLMAQRHGVSWAGRRYDPQNWGGADL
HHHHHHHCCCCCCCHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
VNRCLSAATAALYGISEAAILAAGYAPAIGFLHSGKPQSFVYDIADLFKFETVVPEAFKV
HHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VAAVQSGRGQIDGMAIGEPVGAVRRRCRDAFRRTNVLARIIPAIEDVLAAGGLAVPEAPE
HHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EAMPVAIPPPEPTGDAGHRG
CCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]