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The map label for this gene is ygcH [C]

Identifier: 148260803

GI number: 148260803

Start: 1992259

End: 1992945

Strand: Reverse

Name: ygcH [C]

Synonym: Acry_1809

Alternate gene names: 148260803

Gene position: 1992945-1992259 (Counterclockwise)

Preceding gene: 148260804

Following gene: 148260802

Centisome position: 58.8

GC content: 63.46

Gene sequence:

>687_bases
ATGAGTACGATGTGGCTGTCAAAGGCGCGCTTGAACCACGATCAGAAGGCGGTCGCGGCCCTCGCTTCGGTTCTGGTGCC
TGAAGACGGCTCGGCCCGGGTTGCGGCGACGCATCATCTCGTCTGGTCACTTTTTGCCGGAGACGCGGATCGGAAGCGCG
ACTTCCTGTGGCGTGAAGAGCGTCCGGGCCATTTTCTTATCCTCTCCCCCGACCGGCCAGGCGATGGGGGTGGGCTCTGC
ACGGTCGAGAGCAAGGAATTCGCACCGGCGTTGTCGGCCGGCGACAGGCTTGGCTTTTCCCTGCGTGCGAACGCGGTTGT
AAGCCGGGGAGAGCCCGGCTCCGGCCGGGGCAAGCGTCATGACGTCGTGATGGATGTCCTTCGTCATCATCCTAAGGGCG
AGCGTGCATCTCATCGCCTGGGTCTGGTCACCGAGGTCGGAGCGGCCTGGCTTGTCCGCCAGGGTGAACGTCACGGTTTC
GTAGTCGAAGGCCAGCCGGCCTGCGATGGCTACGAGGCAATCCGGGTGTTGCGTGGAAGAGGTGAGAAGCCTCTGACCTT
CAGCCAGATTGATTTCGCGGGAGTTTTAAGCGTCACCGATCCAGCGCGCTTCATCGCTGCCATTGGCCATGGCTTCGGGC
GGGCGCGGGCCTTTGGCTGTGGCCTCATGCTGATCCGCCGTGTCTGA

Upstream 100 bases:

>100_bases
GCAGCGAAGAGCGGCGGGATGCCCCGATCTCGCGCACCCTATGGCAATTCGGTCTGCGCACAGAGGTCATCGAGGCATTT
TCTCCAACGGAGAATCGGTC

Downstream 100 bases:

>100_bases
TCAGGCGCCGGGTCTGCCGCCGCCGCGACCCATTCCAATTCGTGAACGCTCATCTATCCTGTTTCTCGAGCGCGGACAGC
TCGACGTGATCGATGGGAGC

Product: CRISPR-associated Cse3 family protein

Products: NA

Alternate protein names: CRISPR-Associated Protein Cse3 Family; Cse3 Family CRISPR-Associated Protein; CRISPR-Associated Protein; Cytoplasmic Protein; CRISPR-Associated Protein Cse3 Family Protein; CRISPR-Associated Protein CT

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSTMWLSKARLNHDQKAVAALASVLVPEDGSARVAATHHLVWSLFAGDADRKRDFLWREERPGHFLILSPDRPGDGGGLC
TVESKEFAPALSAGDRLGFSLRANAVVSRGEPGSGRGKRHDVVMDVLRHHPKGERASHRLGLVTEVGAAWLVRQGERHGF
VVEGQPACDGYEAIRVLRGRGEKPLTFSQIDFAGVLSVTDPARFIAAIGHGFGRARAFGCGLMLIRRV

Sequences:

>Translated_228_residues
MSTMWLSKARLNHDQKAVAALASVLVPEDGSARVAATHHLVWSLFAGDADRKRDFLWREERPGHFLILSPDRPGDGGGLC
TVESKEFAPALSAGDRLGFSLRANAVVSRGEPGSGRGKRHDVVMDVLRHHPKGERASHRLGLVTEVGAAWLVRQGERHGF
VVEGQPACDGYEAIRVLRGRGEKPLTFSQIDFAGVLSVTDPARFIAAIGHGFGRARAFGCGLMLIRRV
>Mature_227_residues
STMWLSKARLNHDQKAVAALASVLVPEDGSARVAATHHLVWSLFAGDADRKRDFLWREERPGHFLILSPDRPGDGGGLCT
VESKEFAPALSAGDRLGFSLRANAVVSRGEPGSGRGKRHDVVMDVLRHHPKGERASHRLGLVTEVGAAWLVRQGERHGFV
VEGQPACDGYEAIRVLRGRGEKPLTFSQIDFAGVLSVTDPARFIAAIGHGFGRARAFGCGLMLIRRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24733; Mature: 24601

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTMWLSKARLNHDQKAVAALASVLVPEDGSARVAATHHLVWSLFAGDADRKRDFLWREE
CCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCHHHCCCCCCC
RPGHFLILSPDRPGDGGGLCTVESKEFAPALSAGDRLGFSLRANAVVSRGEPGSGRGKRH
CCCEEEEECCCCCCCCCCEEEECCHHCCCHHCCCCCCCEEEEECEEEECCCCCCCCCCHH
DVVMDVLRHHPKGERASHRLGLVTEVGAAWLVRQGERHGFVVEGQPACDGYEAIRVLRGR
HHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC
GEKPLTFSQIDFAGVLSVTDPARFIAAIGHGFGRARAFGCGLMLIRRV
CCCCEEEECCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
STMWLSKARLNHDQKAVAALASVLVPEDGSARVAATHHLVWSLFAGDADRKRDFLWREE
CCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCHHHCCCCCCC
RPGHFLILSPDRPGDGGGLCTVESKEFAPALSAGDRLGFSLRANAVVSRGEPGSGRGKRH
CCCEEEEECCCCCCCCCCEEEECCHHCCCHHCCCCCCCEEEEECEEEECCCCCCCCCCHH
DVVMDVLRHHPKGERASHRLGLVTEVGAAWLVRQGERHGFVVEGQPACDGYEAIRVLRGR
HHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC
GEKPLTFSQIDFAGVLSVTDPARFIAAIGHGFGRARAFGCGLMLIRRV
CCCCEEEECCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA