| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260765
Identifier: 148260765
GI number: 148260765
Start: 1952645
End: 1953094
Strand: Reverse
Name: 148260765
Synonym: Acry_1770
Alternate gene names: NA
Gene position: 1953094-1952645 (Counterclockwise)
Preceding gene: 148260767
Following gene: 148260764
Centisome position: 57.63
GC content: 60.22
Gene sequence:
>450_bases ATGCCGGAGAGCCAGGATAACCAGCAACTCCTTCAACTGACGGCGCAGATCGTGTCGGCGCATGTATCGCACAATTCGGT TTCCGCCGAAATGCTGCCGGCGCTCATCCGGGATGTCTATCAGAGCCTCAGCGGCACCGAGCAGCCAGTCGAGGAACCGC CGCCGCCGCTGGAACCGGCTGTCAATCCGAAGAAGTCAGTCTTCAACGACTACATTATCTGTCTCGAAGACGGAAAGAAG CTCAAGATGCTTCGCCGTCATCTGAAGTCGGCCTATAACCTGACGCCTGAACAGTATCGTGAACGCTGGGGCCTTGCGAA CGACTATCCGATGGTCGCGCCCGCCTATGCGAAGCAGCGCTCCAACCTTGCCAAGAAGATCGGTCTCGGCACCAAGCCCG CGAGCCAGGCGCCCGCTTCCGGCTCGCCCCGGAGCAAGAAGGGCGACTGA
Upstream 100 bases:
>100_bases TTCGGACGATTTTTTGCGGCAAATTCTTGCAATTCATCCGGAAATGTTCCAAATCAGCCGGAAGTTCAACATTGTTTTTG ACTTCATAAAAGGACAAATC
Downstream 100 bases:
>100_bases CCGCCGCCCTGCTTCCGGTTCTCCGGACGAAATCGACCCGGCGGCACTGTCCGCCGGGTTTTTTTGTCTCCGTGAACCGT CGCTCTGATTGTCAATATGA
Product: MucR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MPESQDNQQLLQLTAQIVSAHVSHNSVSAEMLPALIRDVYQSLSGTEQPVEEPPPPLEPAVNPKKSVFNDYIICLEDGKK LKMLRRHLKSAYNLTPEQYRERWGLANDYPMVAPAYAKQRSNLAKKIGLGTKPASQAPASGSPRSKKGD
Sequences:
>Translated_149_residues MPESQDNQQLLQLTAQIVSAHVSHNSVSAEMLPALIRDVYQSLSGTEQPVEEPPPPLEPAVNPKKSVFNDYIICLEDGKK LKMLRRHLKSAYNLTPEQYRERWGLANDYPMVAPAYAKQRSNLAKKIGLGTKPASQAPASGSPRSKKGD >Mature_148_residues PESQDNQQLLQLTAQIVSAHVSHNSVSAEMLPALIRDVYQSLSGTEQPVEEPPPPLEPAVNPKKSVFNDYIICLEDGKKL KMLRRHLKSAYNLTPEQYRERWGLANDYPMVAPAYAKQRSNLAKKIGLGTKPASQAPASGSPRSKKGD
Specific function: Unknown
COG id: COG4957
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ros/mucR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008807 [H]
Pfam domain/function: PF05443 ROS_MUCR [H]
EC number: NA
Molecular weight: Translated: 16465; Mature: 16334
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESQDNQQLLQLTAQIVSAHVSHNSVSAEMLPALIRDVYQSLSGTEQPVEEPPPPLEPA CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC VNPKKSVFNDYIICLEDGKKLKMLRRHLKSAYNLTPEQYRERWGLANDYPMVAPAYAKQR CCCHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHH SNLAKKIGLGTKPASQAPASGSPRSKKGD HHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PESQDNQQLLQLTAQIVSAHVSHNSVSAEMLPALIRDVYQSLSGTEQPVEEPPPPLEPA CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC VNPKKSVFNDYIICLEDGKKLKMLRRHLKSAYNLTPEQYRERWGLANDYPMVAPAYAKQR CCCHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHH SNLAKKIGLGTKPASQAPASGSPRSKKGD HHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9204561; 11481432 [H]