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The map label for this gene is glpR [H]

Identifier: 148260764

GI number: 148260764

Start: 1951607

End: 1952404

Strand: Reverse

Name: glpR [H]

Synonym: Acry_1769

Alternate gene names: 148260764

Gene position: 1952404-1951607 (Counterclockwise)

Preceding gene: 148260765

Following gene: 148260762

Centisome position: 57.61

GC content: 65.66

Gene sequence:

>798_bases
GTGTCGGACAATTCCGCATCCATCAGCCGGCGGGCCGAAATCGTCGCCCTGGTCGGCTCGAACGGATTTCAGACCATCGA
GGCGCTGGCCCGCCATTTCGACGTGACGGTGCAGACCATCCGCCGGGATCTCAATGCCCTCGCGGCGGACGGCAAGCTCA
GCCGCTATCGCGGCGGCGCCGGCCTGCCGTCCAGCGTCGAGAACATGGAATACCAGCGCCGCCGCGTCGTGCATCTCGAG
GCGAAGCAGCGCATCGCCGACATGGTGGCGGCGGACATTCCCGAACACGCCTCGCTCTTCATCAATATCGGTTCGACAAC
GGAGCAGGTGGCCCGCGCCCTGCTCGGCCATCACGACCTTTCGGTGATTACCAACAACCTCAACGTCGCGCGGATCATGA
GCGAGGACACCGATTTCCGCGTCATCGTCGCCGGCGGCATGGTGCGCAACCGCGATGGCGGCATCACCGGCCAGGCCACC
CGCGACATGTTCGACCGGTTCCGCGTCGATATCGGCATCATCGGCGTCTCCGGCATCGATGCCGACGGCGCGCTCTACGA
TTTCGACATGGACGAGGTGATCTGTTCGCAGGCGATCATCCGCAATGCCCGCCGTGTCGTGCTGGTGACCGACCATTCGA
AATTCGGCCGTCCGGCGATGGTGCGGATCGGCACGCTCGCGCAGGTTTCCGCCCTCTATACCGACCAGCCGCCGCCGCCG
CCGATCGCCGCGCTGATCGGTACGCTCGGAATCGAACTTCATGTCGCCGATTCGGGGCCGGCTTCCGGCGCCCCATGA

Upstream 100 bases:

>100_bases
GATGCGGGGACGATGGTTGCGTTTTGATCCGCCGTGCTCCAATGATGTTCGCAAGCGAAAGCCGGCCGGCCGGCATCGCG
CCTGAAACAGGGGGAAGCGC

Downstream 100 bases:

>100_bases
AAAACGCCCGGTCCCTCGCGGGGCCGGGCGTTGCGGACTGCGTCGCGATCAGGGGCTCAGTCGGCGGCCAGCGCCATGTG
CTTGCGGGCGATCTCGCCGC

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSDNSASISRRAEIVALVGSNGFQTIEALARHFDVTVQTIRRDLNALAADGKLSRYRGGAGLPSSVENMEYQRRRVVHLE
AKQRIADMVAADIPEHASLFINIGSTTEQVARALLGHHDLSVITNNLNVARIMSEDTDFRVIVAGGMVRNRDGGITGQAT
RDMFDRFRVDIGIIGVSGIDADGALYDFDMDEVICSQAIIRNARRVVLVTDHSKFGRPAMVRIGTLAQVSALYTDQPPPP
PIAALIGTLGIELHVADSGPASGAP

Sequences:

>Translated_265_residues
MSDNSASISRRAEIVALVGSNGFQTIEALARHFDVTVQTIRRDLNALAADGKLSRYRGGAGLPSSVENMEYQRRRVVHLE
AKQRIADMVAADIPEHASLFINIGSTTEQVARALLGHHDLSVITNNLNVARIMSEDTDFRVIVAGGMVRNRDGGITGQAT
RDMFDRFRVDIGIIGVSGIDADGALYDFDMDEVICSQAIIRNARRVVLVTDHSKFGRPAMVRIGTLAQVSALYTDQPPPP
PIAALIGTLGIELHVADSGPASGAP
>Mature_264_residues
SDNSASISRRAEIVALVGSNGFQTIEALARHFDVTVQTIRRDLNALAADGKLSRYRGGAGLPSSVENMEYQRRRVVHLEA
KQRIADMVAADIPEHASLFINIGSTTEQVARALLGHHDLSVITNNLNVARIMSEDTDFRVIVAGGMVRNRDGGITGQATR
DMFDRFRVDIGIIGVSGIDADGALYDFDMDEVICSQAIIRNARRVVLVTDHSKFGRPAMVRIGTLAQVSALYTDQPPPPP
IAALIGTLGIELHVADSGPASGAP

Specific function: Repressor of the glycerol-3-phosphate regulon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789829, Length=247, Percent_Identity=49.7975708502024, Blast_Score=249, Evalue=1e-67,
Organism=Escherichia coli, GI87082344, Length=244, Percent_Identity=40.1639344262295, Blast_Score=194, Evalue=5e-51,
Organism=Escherichia coli, GI1788069, Length=242, Percent_Identity=28.099173553719, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789059, Length=245, Percent_Identity=28.9795918367347, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI226510968, Length=233, Percent_Identity=26.1802575107296, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1789170, Length=232, Percent_Identity=28.0172413793103, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1789519, Length=247, Percent_Identity=24.2914979757085, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787540, Length=228, Percent_Identity=25.8771929824561, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787063, Length=223, Percent_Identity=26.0089686098655, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790635, Length=252, Percent_Identity=25.7936507936508, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790753, Length=223, Percent_Identity=24.2152466367713, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 28498; Mature: 28367

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNSASISRRAEIVALVGSNGFQTIEALARHFDVTVQTIRRDLNALAADGKLSRYRGGA
CCCCCCCHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
GLPSSVENMEYQRRRVVHLEAKQRIADMVAADIPEHASLFINIGSTTEQVARALLGHHDL
CCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCC
SVITNNLNVARIMSEDTDFRVIVAGGMVRNRDGGITGQATRDMFDRFRVDIGIIGVSGID
EEEECCCCEEEEECCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHEEEEEEEEECCCC
ADGALYDFDMDEVICSQAIIRNARRVVLVTDHSKFGRPAMVRIGTLAQVSALYTDQPPPP
CCCCEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECHHHHHHHHHCCCCCCC
PIAALIGTLGIELHVADSGPASGAP
HHHHHHHHHCEEEEEECCCCCCCCC
>Mature Secondary Structure 
SDNSASISRRAEIVALVGSNGFQTIEALARHFDVTVQTIRRDLNALAADGKLSRYRGGA
CCCCCCHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
GLPSSVENMEYQRRRVVHLEAKQRIADMVAADIPEHASLFINIGSTTEQVARALLGHHDL
CCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCC
SVITNNLNVARIMSEDTDFRVIVAGGMVRNRDGGITGQATRDMFDRFRVDIGIIGVSGID
EEEECCCCEEEEECCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHEEEEEEEEECCCC
ADGALYDFDMDEVICSQAIIRNARRVVLVTDHSKFGRPAMVRIGTLAQVSALYTDQPPPP
CCCCEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECHHHHHHHHHCCCCCCC
PIAALIGTLGIELHVADSGPASGAP
HHHHHHHHHCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8955387; 3045764; 9278503 [H]